Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1234 ATGGGAAAGCCATTCAAGGGAATAATTCAAGATGTCAAAGGAAGAGCTCAATGCTATAAACAAGATTGGGCTTGTACAGTCTGTACTGGCCTTAGCATATTGGCTCCAACGTTCTACATATTCTTTGCTTCTGCTCTTCCTGTCATTGCTTTTGGAGAGCAACTTAGTAGGGATACAGATGGAAGCTTGAGCACAGTGGAAACACTTGCATCTACTGCTATTTGTGGAATTATCCACTCAATACTTGGTGGCCAACCATTGTTGATTTTAGGAGTTGCTGAACCCACTGTTATAATGTACACTTATCTCTACAGTTTCTCCAAGAAAACACCAGAACTAGGTGCCAAGCTCTTTCTGGCTTGGGCTGGTTGGGTTTGTGTTTGGTCAGGATTCTTCTTGATTCTGCTTGCAATTTTCAATGCTTGCAATATTATCACAAGGTTTACAAGAATTGCTGGGGAGTTATTTGGGATGCTAATAACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGATTGATAGGTGAGTTCAGCACGCCCAAGTCTGAAGATCCTTCCTCAGAGGAATTTCAATTCCAATGGCGGTATACAAATGGATTGCTTGCAATCATTTTCTCTTTTGGAGTGCTTCTCACTGCGCTTAAAAGCAGAAGAGCAAGAACATGGCGATATGGAACAGGGTGGCTTCGAGGTTTTGTTGCAGATTATGGGGTTCCGATGATGGTAGTGTCATGGACAGCACTATCATATGGTATACCAGGCAGAGTTCCAGAAGGTGTTCCTAGAAGGCTTGTCTGTCCCCTTCCCTGGGAACCTGCGTCCCTCTATCACTGGACAGTAGTGAAGGACATGTTGGAGGTACCCGTGGTTTATATAATTGCGGCAATTGTTCCAGCTCTGATGATAGCAGGCTTATACTTTTTTGATCATACTGTTGCCTCCCAGATGGCACAACAGAAAGAATTTAATCTTCAAAAGCCATCTGCTTACCACTATGATCTTTTGCTGCTTGGAATAATGACAATAATTTGTGGTGTCCTTGGCCTTCCCCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAATGAGTTTGGCAGTTCTTAGGAGGCGGTTGATCCGAAAGAGGGTGGTGAAGAGTGCCAAGGAATGTATTAAGCAGCAGAAGACCAACTCTGAATTATATGGAAAGATGCAAGCAGTGTTTATAGAAATGGATACAGTCCCTACAGTTAAAGAATTGGAGAATTTGAAGGAAGCTGTAATGAAATCTGATAACAAGGACGGTGCAAAGGAAAAATTTGATCCTGAGAGACACATAGATGCATATCTACCGGTCAGAGTTAATGAGCAAAGATTGACCAACATATTGCAGTCTCTCTTTGTTGGAGTGTCAATCTTAGCCATGTCTGTTATCAAAAGGATACCAACCTCAGTTCTATGGGGTTATTTTGGTTACATGGCAATTGATAGTCTCCCAGGGAATCAATTCTGGGAAAGGATTTTGCTCCTGTTCATCACCCCAAGTCGGCGTTATAAAACTTTGGAAGGTTCTCATGCATCATTTGTGGAGACAGTACCATTCAAGACCATAGCTGCATTTACAGCCTTGCAGATTGTATATTTTCTGTTCTGTTTCGGGGTGACATGGATACCTATAGGTGGAATATTGTTTCCTCTGCCATTCTTCCTTCTTATAGTTATAAGAGAACACTTGCTTCCAAAGCTATTCAAGCCTAGCCATCTTCAAGAACTAGATGCTTCTGAGTATGAGGAAATTGCTGGTGCTCCACTCATGGTACAATTTATTCTTATGACAAATTATGATAAGGAGTCACGTGGTAATGACGCTGATGCAAGCTCAGAAGACTTCTACGATGCAGAGATATTGGATGAGATTACTACCAACCGGGGAGAGTTGAAAGTTAGAACTGTTCATCCTGAAGATGCTGCCTGA 1956 0.4218 MGKPFKGIIQDVKGRAQCYKQDWACTVCTGLSILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTVIMYTYLYSFSKKTPELGAKLFLAWAGWVCVWSGFFLILLAIFNACNIITRFTRIAGELFGMLITVLFFQEAIKGLIGEFSTPKSEDPSSEEFQFQWRYTNGLLAIIFSFGVLLTALKSRRARTWRYGTGWLRGFVADYGVPMMVVSWTALSYGIPGRVPEGVPRRLVCPLPWEPASLYHWTVVKDMLEVPVVYIIAAIVPALMIAGLYFFDHTVASQMAQQKEFNLQKPSAYHYDLLLLGIMTIICGVLGLPPSNGVLPQSPMHTMSLAVLRRRLIRKRVVKSAKECIKQQKTNSELYGKMQAVFIEMDTVPTVKELENLKEAVMKSDNKDGAKEKFDPERHIDAYLPVRVNEQRLTNILQSLFVGVSILAMSVIKRIPTSVLWGYFGYMAIDSLPGNQFWERILLLFITPSRRYKTLEGSHASFVETVPFKTIAAFTALQIVYFLFCFGVTWIPIGGILFPLPFFLLIVIREHLLPKLFKPSHLQELDASEYEEIAGAPLMVQFILMTNYDKESRGNDADASSEDFYDAEILDEITTNRGELKVRTVHPEDAA* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1234 651 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016021
Apr5g1234 651 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
Apr5g1234 651 Pfam HCO3- transporter family 193 371 IPR011531 GO:0006820|GO:0016021
Apr5g1234 651 PANTHER ANION EXCHANGE PROTEIN 1 646 IPR003020 GO:0005452|GO:0006820|GO:0016020
Apr5g1234 651 Gene3D Helical hairpin bin 15 57 - -
Apr5g1234 651 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1234 Apr-Chr5 16785012 16789157 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1234 4 651 Antiporters AT4G32510 66.717 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1234 K24194 - gmx:100792745 1088.94