Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1230 ATGGGAAAGCCATTCAAGGGAATAATTCAAGATGTCAAAGGAAGAGCTCAATGCTATAAACAAGATTGGGCTTGTGCACTCTGTACTGGCGTTAGCATATTGGCTCCAACGTTCTACATATTCTTTGCTTCTGCTCTTCCTGTCATTGCTTTTGGAGAGCAACTTAGTAGGGATACAGATGGAAGCTTGAGCACAGTGGAAACACTTGCATCTACTGCTATTTGTGGAATTATCCACTCAATACTTGGTGGCCAACCATTGTTGATTTTAGGAGTTGCTGAACCCACTGTTATAATGTACACTTATCTCTACAGTTTCTCCAAGAAAACACCAGAACTAGGTGCCAAGCTCTTTCTGGCTTGGGCTGGTTGGGTTTGTGTTTGGTCAGGATTCTTCTTGATTCTGCTTGCAATTTTCAATGCTTGTAATATTATCACAAGGTTTACAAGAATTGCTGGGGAGTTATTTGGGATGCTAATAACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGATTGATAGGTGAGTTCAGCACGCCCAAGTCTGAAGATCCTTCCTCAGAGGAATTTCAATTCCAATGGCGGTATACAAATGGACTACTTGCAATCATTTTCTCTTTTGGAGTGCTTCTCACTGCGCTTAAAAGCAGAAGAGCAAGAACATGGCGATATGGAACAGGGTGGCTTCGAGGTTTTGTTGCAGATTATGGGGTTCCGATGATGGTAGTGTCATGGACAGCACTATCATATGGTATACCAGGCAAAGTTCCAGAAGGTGTTCCTAGAAGGCTTGTCTGTCCCCTTCCCTGGGAACCTGCGTCCCTCTATCACTGGACAGTAGTGAAGGACATGTTGGAGGTACCCATGGTTTATATAATTGCGGCAATTGTTCCAGCTCTGATGATAGCAGGCTTATACTTTTTTGATCATAGCGTTGCCTCCCAGATGGCACAACAGAAAGAATTTAATCTTCAAAAGCCATCTGCTTTCCACTATGATCTTTTGCTGCTTGGAATAATGACTATAATTTGTGGTGTCCTTGGCCTTCCCCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTGGCAGTCCTTAGGAGGCGGTTGATCCGAAAGAAAGTGGTGAAGAGTGCCAAGGAATGTATTAAGCAGCAGAAGACCAACTCTGAATTATATGGAAAGATGCAAGCAGTGTTTATAGAAATGGAAACAGCCCCTACAGTTAAAGAATTGGAGAATTTGAAGGAAGCTGTAATGAAATCTGATAACAAGGATGGTGCAAAAGAAAAATTTGATCCTGAGAAACACATAGATGCATATCTACCAGTCAGAGTTAATGAGCAAAGATTGACCAACATATTGCAGTCTCTCTTTGTTGGAGTGTCAATTTTAGCCATGCCTGTTATCAAAAGGATACCAACCTCAGTTCTATGGGGTTATTTTAGTTACATGGCAATTGATAGTCTCCCAGGGAACCAATTCTGGGAAAGGATTTTGCTCCTGTTCATCACCCCAAGTCGGCGTTACAAAATTTTGGAAGGTTCTCATGCATCATTTGTGGAGACAGTACCATTCAAGACCATAGCTGCATTTACAGCCTTACAGTTAGCATATTTTCTGTTCTGTTTCGGGGTGACATGGATACCTATAGGCGGAATATTGTTTCCTTTGCCATTCTTCCTTCTCATAGTTATAAGAGAACACTTGCTTCCAAAGCTATTCAAGCCTAGCCATCTTCAAGAACTAGATGCTTCTGAGTATGAGGAAATTGCTGGTGCTCCACACGGTTCACTGAGGGATAAGGAGTCACTTGATAATGACACTGATGCAAGCTCAGAAGACTTCTACGATGCAGAGATATTGGATGAGATGACTACCAACCGGGGAGAGTTGAAACTTAGAACTGTTAGCTTCAATGACAGAAACCACAGCCGCAACAGTAACAGTAACAGTTTCAGTGAAGACAGACACTCTCAGGTTTATCCTGAAGATGCTGTCTGA 2010 0.4229 MGKPFKGIIQDVKGRAQCYKQDWACALCTGVSILAPTFYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIIHSILGGQPLLILGVAEPTVIMYTYLYSFSKKTPELGAKLFLAWAGWVCVWSGFFLILLAIFNACNIITRFTRIAGELFGMLITVLFFQEAIKGLIGEFSTPKSEDPSSEEFQFQWRYTNGLLAIIFSFGVLLTALKSRRARTWRYGTGWLRGFVADYGVPMMVVSWTALSYGIPGKVPEGVPRRLVCPLPWEPASLYHWTVVKDMLEVPMVYIIAAIVPALMIAGLYFFDHSVASQMAQQKEFNLQKPSAFHYDLLLLGIMTIICGVLGLPPSNGVLPQSPMHTKSLAVLRRRLIRKKVVKSAKECIKQQKTNSELYGKMQAVFIEMETAPTVKELENLKEAVMKSDNKDGAKEKFDPEKHIDAYLPVRVNEQRLTNILQSLFVGVSILAMPVIKRIPTSVLWGYFSYMAIDSLPGNQFWERILLLFITPSRRYKILEGSHASFVETVPFKTIAAFTALQLAYFLFCFGVTWIPIGGILFPLPFFLLIVIREHLLPKLFKPSHLQELDASEYEEIAGAPHGSLRDKESLDNDTDASSEDFYDAEILDEMTTNRGELKLRTVSFNDRNHSRNSNSNSFSEDRHSQVYPEDAV* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1230 669 MobiDBLite consensus disorder prediction 642 669 - -
Apr5g1230 669 Gene3D Helical hairpin bin 15 57 - -
Apr5g1230 669 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 663 - -
Apr5g1230 669 PANTHER ANION EXCHANGE PROTEIN 1 663 IPR003020 GO:0005452|GO:0006820|GO:0016020
Apr5g1230 669 MobiDBLite consensus disorder prediction 643 659 - -
Apr5g1230 669 Pfam HCO3- transporter family 4 178 IPR011531 GO:0006820|GO:0016021
Apr5g1230 669 Pfam HCO3- transporter family 193 371 IPR011531 GO:0006820|GO:0016021
Apr5g1230 669 Pfam HCO3- transporter family 446 536 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1230 Apr-Chr5 16754048 16759753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1230 4 668 Antiporters AT4G32510 67.500 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1230 K24194 - gmx:100787412 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0162 9 2122913 2127123 Apr5g1230 5 16754048 16759753 PCT