Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1224 ATGGAAAGTGGTGAACTGAGAGTGCCTAGTGCACGCATTGGAAGCTCTAGCATATGGAGAAGCAGCGGTGTTGATGTGTTTTCAGGGTCCTCAAGAAGAGATGATGATGAACAAGACCTTAAATGGGCTGCCATTGAGAAACTTCCCACATATCTACGCATGAATAGGGGCATCCTCAATGAACCACATGCTCAACCTATAGAGATTGATATAAACAAACTTGGTCCACTTCAGAGGAAGACTTTGGTGGAGAGGCTTGTCAAGATTGCAGAAGAAGATAATGAGAAGTTCTTGTTGAAGTTTAGAGATCGCATTGATCGAGTTGGACTTGAAATTCCAACAATTGAAGTACGTTTTGAGCACTTGAGTGTTGAAGCTGAAGCTCATGTTGGAAGCAGGGCATTGCCTACAATCCTTAACTTCTGTGTGAATTTGTTAGAGGGGTTCTTGAATTCTCTTCACCTTATTCCCAGTAGAAAGAAGCCATTCACAATTCTTCATCATGTCAGTGGAATCATCAAGCCTAAAAGAATGACACTGCTTTTAGGCCCTCCAAGCTCTGGAAAGACCACATTGTTGTTGGCACTGGCTGGAAGACTCAGTAAAGATCTAAAATTTTCGGGCCGAGTTTCGTATAATGGCCATCGGATGGAGGAATTTGTGCCACAGAGAACATCAGCTTACATAAGTCAAACTGATCTGCACATAGGAGAAATGACAGTCAGAGAAACATTGGCTTTTTCAGCAAGGTGTCAAGGGATTGGAACCCGTTATGAGATGCTGGCAGAACTATCAAGAAGAGAGAAGGCTGCAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCAGCAGCACTAGAAGGCCAAGAAACCAATGTAGTTACAGATTATATAATGAAGATTTTGGGACTAGATGTTTGTGCTGATACCATGGTAGGGGATGACATGATTCGGGGTATTTCTGGTGGACAGAAAAAGAGAGTGACAACTGGTGAGATGCTAGTTGGACCAGCAAGAGCTCTTTTCATGGATGAAATATCAACTGGTTTGGACAGTTCTACCACATTCCAAATGGTTAATTCTCTAAGGCAATCAATCCACATTCTCAATGGAACTGCTGTGATCTCTCTTCTCCAGCCAGCACCAGAAACTTATGAGTTATTTGATGATATAATTCTCCTCTCAGATGGACAAATTGTTTATCAGGGTCCAAGGGAAAATGTACTTGAATTCTTTGAATACATGGGTTTCAAATGTCCAGAGAGGAAAGGAGTAGCAGACTTTCTACAAGAGGTAACATCAAGAAAAGATCAAGAACAGTATTGGGCTAATAAAGATGAGCCATATACCTTCATCACTGTTAAAGAGTTTGCTGAAGCATTTCAATCATTTCACGTTGGTAGAAAACTTGGTGATGAACTTGGTACTCCATTTGACACTTCCAAAGGCCACCCTGCTGTGTTAACAAAGAAAAAGTATGGTGTTAGCAAGAAGGAACTGTTGAAAGCTTGTGTATCCAGAGAATTCTTACTCATGAAAAGGAATTCATTTATATATATTTTCAAGATGTGGCAATTGATTTTAACCGGATTCATAACAATGACATTGTTCCTGAGAACTGAGATGCACCGGGATACAGAAACTGATGGTGGGATCTTTATGGGTGCACTGTTCTTTGTACTAATTGTTATTATGTTCAATGGATACTCAGAACTATCCATGTCCATCATGAAACTCCCAGTTTTCTACAAGCAAAGGGACCTTCTCTTTTTTCCTTCTTGGGCATACTCTATACCTACATGGATCCTTAAGATTCCTATAACCTTAGTGGAAGTTGGTATTTGGGATGTGATGACTTACTATGTTATAGGATTTGATCCAAGCTTTGCTAGGTTCATCAAACAGTACTTTCTACTAGTTTGTATCAACCAGATGGCATCTGGACTTTTTCGATTTATGGGGGCAGTTGGGAGGAACATTATTGTTGCAAACACAGTTGGGTCTTTTGCTTTGCTTGCAGTTATGGTCATGGGTGGATTTGTCCTATCTAGAGTTGATGTGCAGAAGTGGTGGTTATGGGGTTATTGGTTCTCACCCATGATGTATGCACAGAATGCTCTAGCTGTGAATGAATTCCTCGGCAAGAGTTGGTCACATGTTCTGCCTAATTCAACAGAACCATTAGGAGTACTAGTCTTGAAGTCACGTGGGATTTTCCCTGAAACATACTGGTATTGGATTGGAGTTGGAGCTTCCATTGGATACATGTTACTATTCAACTTCCTTTTCCCATTGGCCTTACATTATCTTGACCGTAAGTACAAGTATCCTATAAGACATGAACCTTTGTCAGCATTTGGTAAACCACAAGCTTTAATATCAGAAGAAGCCTTAGCTGAGAGAAATGCGGGCAAAAATGGACACATCATCGAACTGTCATCTAGATTCAGAGGTTCTTCTGGGAATGAAAGTCGAAGAAGTGTGTCATCTAGAACACTGTCAGCAAGAGTGGGAAGCATTAGTGCAACTGATCAAAGCAGGAAGCGAGGGATGGTTCTTCCTTTCACACCCCTTTCTATCACCTTCGATGAAATCAGATATGCAGTGGAAATGCCACAGGAAATGAAGAACCAAGGCATTCTTGAAGATAGACTTGAACTTTTGAAGGGTGTTAATGGAGCTTTTAGACCAGGAGTTCTAACAGCCCTAATGGGTATAAGTGGGGCAGGTAAAACAACTCTAATGGATGTGTTGTCTGGAAGAAAAACAGCAGGATATATTCAAGGGCAAATCACAATATCCGGGTACCCTAAAAAGCAAGAAACTTTTGCTCGCATAGCAGGATACTGCGAACAAACTGATATCCACTCCCCCCATGTTACAGTCTCTGAGTCATTGGTTTATTCTGCATGGCTCCGGTTACCCCCTGAGGTTGATTCTACCACCAGACAGATGTTCATTGAGGAAGTGATGGAGCTGGTAGAGTTGACTTCATTAAGAGAAGCCTTGGTGGGTTTGCCTGGAGTGAATGGCTTGTCCACGGAGCAGCGCAAGAGGTTGACAATTGCAGTTGAACTTGTTGCCAATCCATCTATTATATTCATGGACGAACCTACCTCTGGCCTTGATGCTAGAGCTGCTGCTATAGTAATGAGAACAGTGAGGAATACAGTGGATACAGGTCGAACTGTGGTATGCACAATTCACCAGCCTAGCATTGATATATTTGATGCTTTTGATGAGTTACTCCTCTTGAAGCGTGGAGGTGAGGAAATATATGTGGGGCCTTTAGGTCGGCATTGTTCTCATTTGATCAATTACTTTGAGGGAATTAATGGAGTGACAAAAATTAAGAACGGTTATAATCCTGCCACCTGGATGTTGGAGATTACTTCAGACGCACAAGAAGAAGCTCTTGGAGTTAACTTTGCTGAACTATACAAGAATTCCGACCTATACAGGAGAAACAAGGCCTTGATCGGGGAACTTAATACCCCACTAGCTGGTTCTAAAGACTTGTACTTCCCCACAAAGTACTCACAGTCTTTCTTTACCCAATGTATGGCTTGCCTTTGGAAACAAAACCTATCTTACTGGAGAAATCCCCCATATAGTGCAGTGAGACTTCTATTCACAACAATCATAGCCATCTTGTTTGGGACAATATTTTGGGATATTGGCTCCAAAAGGCAAAGAAAACAAGATCTATTCAATGCAATGGGATCCATGTATGCTGCAGTCCTCTTCATTGGAGTACAAAATGCCACATCTGTGCAACCAGTTGTAGCCATTGAGAGAACAGTCTTCTATAGAGAAAGAGCTGCAGGAATGTACTCAGCTTTACCCTATGCATTTGGACAGGTTGCTATTGAGATCCCATACATACTCATACAGACCCTTGTGTATGGAGTTATAGTGTATGCCATGATTGGTTTTGATTGGACAATCAGCAAGTTCTTTTGGTATCTATTCTTCATGTTCTTCACCTTTTTATACTTCACCTTCTATGGAATGATGGCTGTGGGTCTCACCCCAGATCACAATGTTGCTGCTATAGTTTCCTTTGGGTTCTACATGATATGGAACCTTTTCTCAGGATTTGTCATCCCCCGAACGAGAATGCCAGTGTGGTGGAGATGGTACTTGTGGATTTGTCCTGTTTCTTGGACCTTATATGGATTGGTTACTTCACAATTTGGTGATATAAAAGAACGTATAGAGACTGGAGAGACTGTGGAAGAGTTTGTTAGGAGTTATTTTGGATATAGAGATGATTTTATAGGTGTAGCTGCAGTTGTTGTTGTTGGCTTTTCACTCCTCTTTGGATTTACCTTTGCCTTCTCAATTAAGGCATTCAATTTCCAAAAGAGATGA 4380 0.4128 MESGELRVPSARIGSSSIWRSSGVDVFSGSSRRDDDEQDLKWAAIEKLPTYLRMNRGILNEPHAQPIEIDINKLGPLQRKTLVERLVKIAEEDNEKFLLKFRDRIDRVGLEIPTIEVRFEHLSVEAEAHVGSRALPTILNFCVNLLEGFLNSLHLIPSRKKPFTILHHVSGIIKPKRMTLLLGPPSSGKTTLLLALAGRLSKDLKFSGRVSYNGHRMEEFVPQRTSAYISQTDLHIGEMTVRETLAFSARCQGIGTRYEMLAELSRREKAANIKPDPDLDIYMKAAALEGQETNVVTDYIMKILGLDVCADTMVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMVNSLRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYTFITVKEFAEAFQSFHVGRKLGDELGTPFDTSKGHPAVLTKKKYGVSKKELLKACVSREFLLMKRNSFIYIFKMWQLILTGFITMTLFLRTEMHRDTETDGGIFMGALFFVLIVIMFNGYSELSMSIMKLPVFYKQRDLLFFPSWAYSIPTWILKIPITLVEVGIWDVMTYYVIGFDPSFARFIKQYFLLVCINQMASGLFRFMGAVGRNIIVANTVGSFALLAVMVMGGFVLSRVDVQKWWLWGYWFSPMMYAQNALAVNEFLGKSWSHVLPNSTEPLGVLVLKSRGIFPETYWYWIGVGASIGYMLLFNFLFPLALHYLDRKYKYPIRHEPLSAFGKPQALISEEALAERNAGKNGHIIELSSRFRGSSGNESRRSVSSRTLSARVGSISATDQSRKRGMVLPFTPLSITFDEIRYAVEMPQEMKNQGILEDRLELLKGVNGAFRPGVLTALMGISGAGKTTLMDVLSGRKTAGYIQGQITISGYPKKQETFARIAGYCEQTDIHSPHVTVSESLVYSAWLRLPPEVDSTTRQMFIEEVMELVELTSLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGRHCSHLINYFEGINGVTKIKNGYNPATWMLEITSDAQEEALGVNFAELYKNSDLYRRNKALIGELNTPLAGSKDLYFPTKYSQSFFTQCMACLWKQNLSYWRNPPYSAVRLLFTTIIAILFGTIFWDIGSKRQRKQDLFNAMGSMYAAVLFIGVQNATSVQPVVAIERTVFYRERAAGMYSALPYAFGQVAIEIPYILIQTLVYGVIVYAMIGFDWTISKFFWYLFFMFFTFLYFTFYGMMAVGLTPDHNVAAIVSFGFYMIWNLFSGFVIPRTRMPVWWRWYLWICPVSWTLYGLVTSQFGDIKERIETGETVEEFVRSYFGYRDDFIGVAAVVVVGFSLLFGFTFAFSIKAFNFQKR* 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1224 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 862 1114 IPR003439 GO:0005524
Apr5g1224 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 423 IPR027417 -
Apr5g1224 1459 Pfam ABC transporter 890 1042 IPR003439 GO:0005524
Apr5g1224 1459 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Apr5g1224 1459 CDD ABCG_PDR_domain1 148 405 IPR034001 -
Apr5g1224 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 883 1099 IPR027417 -
Apr5g1224 1459 PANTHER ATP-BINDING CASSETTE TRANSPORTER 10 1459 - -
Apr5g1224 1459 Pfam ABC-2 type transporter 381 434 IPR043926 GO:0140359
Apr5g1224 1459 SMART AAA_5 175 407 IPR003593 -
Apr5g1224 1459 SMART AAA_5 899 1091 IPR003593 -
Apr5g1224 1459 Pfam ABC-2 type transporter 1187 1401 IPR013525 GO:0016020|GO:0140359
Apr5g1224 1459 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Apr5g1224 1459 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Apr5g1224 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Apr5g1224 1459 Gene3D - 877 1104 IPR027417 -
Apr5g1224 1459 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 10 1459 - -
Apr5g1224 1459 Gene3D - 152 462 IPR027417 -
Apr5g1224 1459 CDD ABCG_PDR_domain2 859 1097 IPR034003 -
Apr5g1224 1459 Pfam Plant PDR ABC transporter associated 719 774 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1224 Apr-Chr5 16716017 16723461 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1224 K08711 - gmx:100804030 2660.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1224 5 16716017 16723461 Apr5g1224 5 16716017 16723461 ECH
Apr9g0153 9 2039565 2048201 Apr5g1224 5 16716017 16723461 PCT