Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1223 ATGGAAGAAATTGAAAGGGTGAATTGTTGTAGTGAAAGTGAAAATGAAAGTAGGAGCTATAGTGAGAGTCGACCTCCCAATCCAAACCCTGCGGTGTTACCTTGCAAGAAATCCCTTGTTCGCCACGCTTCTCTTTTGAAAACGAACTTGTCAGATGTATCTGTCGAACCAGGACATGTTACTGAAGATTGTCACTCTGATTTCTTTCCAATGCTTCGCTCTGGAGCATGCGCTGATATTGGATTCCGGTCAACTATGGAAGATGCATATGTTTGTGTTGACAATTTTATGCAGGATTATGGACTCAAGAACAATGTAGATGGACCCAGTGCTTTTTATGGGGTCTTTGATGGACATGGTGGAAAGCATGCTGCTGACTTTGCTTGCCGTCATTTGCCAAAGTTCATTCTTGAGGATGGAGATTTCCCGAAAGATATTGAAAGGATAGTTGCTTCAGCATTTATGCAGACAGACAATGCCTTTGCAGAAGCTTGCTCTCTGGATGCTCAACTTGTATCTGGCACCACTGCATTGGCTACTCTTGTTATAGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGCCGTGGAAAGGCAATAGAAATGTCGAGGGATCACAAACCGGGGTGCAAAAAAGAGCAGAAGCGTATCGAGGCATCTGGGGGGTATGTATACGATGGATATCTTAATGGACAGCTTAATGTTGCTCGTGCTCTTGGTGACTGGCACATGGAAGGAATGAAAAGCAAAGATGGTGGACCCCTGACTGCAGAACCTGAACTCATGACCACAAAACTGACCGCTGAGGACGAATTTCTCATCATAGGTTGTGACGGGATTTGGGATGTATTTAGGAGCCAAAATGCAGTGGATTTTGCTCGGCGTAGGCTTCAGGAGCATAACGACCCAGCCTTGTGTAGTAAGGATCTGGTTGATGAGGCTTTGAAGAGAAAAAGTGGAGACAATTTGGCTGCTGTTGTGGTTTGCTTCCACCAGCAGCCTCCACCTAACTTGGTGGCTCCACGCTCTAGAGTGCACAGGAGCTTCTCTGCTGAGGATTTGAAGGAGTTGCAAAGCTTCCTAGACAGCTTGGGTAATTGA 1119 0.462 MEEIERVNCCSESENESRSYSESRPPNPNPAVLPCKKSLVRHASLLKTNLSDVSVEPGHVTEDCHSDFFPMLRSGACADIGFRSTMEDAYVCVDNFMQDYGLKNNVDGPSAFYGVFDGHGGKHAADFACRHLPKFILEDGDFPKDIERIVASAFMQTDNAFAEACSLDAQLVSGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPGCKKEQKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKSKDGGPLTAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPALCSKDLVDEALKRKSGDNLAAVVVCFHQQPPPNLVAPRSRVHRSFSAEDLKELQSFLDSLGN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1223 372 Pfam Protein phosphatase 2C 75 328 IPR001932 -
Apr5g1223 372 Gene3D - 56 340 IPR036457 -
Apr5g1223 372 SUPERFAMILY PP2C-like 67 338 IPR036457 -
Apr5g1223 372 ProSitePatterns PPM-type phosphatase domain signature. 112 120 IPR000222 GO:0043169
Apr5g1223 372 SMART PP2C_4 63 334 IPR001932 -
Apr5g1223 372 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 61 358 - -
Apr5g1223 372 MobiDBLite consensus disorder prediction 1 31 - -
Apr5g1223 372 PANTHER PROTEIN PHOSPHATASE 2C 61 358 IPR015655 GO:0004722|GO:0006470
Apr5g1223 372 CDD PP2Cc 73 336 IPR001932 -
Apr5g1223 372 ProSiteProfiles PPM-type phosphatase domain profile. 73 336 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1223 Apr-Chr5 16710491 16714055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1223 4 372 PP2C-type Phosphatase Gene Family AT2G25620 66.921 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1223 K14803 - gmx:100815725 649.432