Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1217 ATGGCGGTGCTGAGAATGGCTCAGCCTCAAAATGGGAGCAAGAGCAGTGCCAGCCAGCAATTGGTCCTTCATGACTTTCTGGGCATGAAGCCCGCAGCTGATTCCCCCAAAACCACCGATGTCAGGTTGTCGGAGCCGTCGCCCTCTGCTTCTTCCGCCGCTCCACGCGCCCCCTTCTCCACCGCCTCTGACATCGCTTCTGAAAAACAGGTTGGAAATCATCTTGAGGGAGTTCCATTCTATGGCCCAAGAAGTGAATTTTCTGGCACTGAGATAAGTAACAGATTAGTGGGAAGCAAGAGAAGTAATTCTGATTCAACTTTTATGGGTTCCTCCAGAGATGCCTTCCAAACGGTCCCTGATTCCTTTCAAAACTCACATTTGATGAAGGTGCTCCGAAATGCGGCTGGAGGAGAGAGGTCTAGAAGGCACAATGATGATGAAGTGTTACTTGGTATGCAGTCAATGAAGCCATCTTCCTCTCAGTTATTTCAGCCTCCTACCAACACTAAGATTGATGCCAGTAAATGGGAAAGATCTATTCTCATGAATGTTGGCCCTTCCATGCCACATGCACCGCGTGGCGGGCAATTGGCACCTTTTGTACACCAAATAGCTTCAAGCAAGATTAGAGATACTAATGCTGGCCCTTCATTTATCTCTCAGTCAGCTGCTGATGAAGGTTCTAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTACTATAAACACAACTGCTACAGCCCCTGAGAAAACTTCATCTGCAGTACTGCTTGGCAGCAGCAGCAGCAGGCCAAAGCCTGTAACTAATATAATAGATTCATCCACATCTCCAAGCAGTCAACATGGGCTAACATCTGTCAGCCGCCAGATGACTATTTTTTATGGAGGTCAAGCTCATGTATTTGATGATGTCCACCCTCAGAAGGCAGATATTATAATGGCTTTGGCTGGGTCAAATGGTGGATCTTGGTCCACTGCATTCTCTCCTAAATCTGCTGCAAAGATGGTCAATGAAAGTAACTTGCACAGTGGAGAAAATGAAACAGGTGCAGTGAGTAATGTGGCATTCCCACAGGAGCTTCACGGGAAATTGTCTATTACTGGCAGTTCTAGCCATGCCATTGGGCCTGGTGATCGAATATCTACTCCAGCAGGGGCACACCAAGGAAGCGTTTTTGCTAAAGATGGAAGAAATCCGGTTCAAGCAGCAGATCCCAGTTCTGAAGACAAAAGAGCACAGTGA 1245 0.4723 MAVLRMAQPQNGSKSSASQQLVLHDFLGMKPAADSPKTTDVRLSEPSPSASSAAPRAPFSTASDIASEKQVGNHLEGVPFYGPRSEFSGTEISNRLVGSKRSNSDSTFMGSSRDAFQTVPDSFQNSHLMKVLRNAAGGERSRRHNDDEVLLGMQSMKPSSSQLFQPPTNTKIDASKWERSILMNVGPSMPHAPRGGQLAPFVHQIASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSTINTTATAPEKTSSAVLLGSSSSRPKPVTNIIDSSTSPSSQHGLTSVSRQMTIFYGGQAHVFDDVHPQKADIIMALAGSNGGSWSTAFSPKSAAKMVNESNLHSGENETGAVSNVAFPQELHGKLSITGSSSHAIGPGDRISTPAGAHQGSVFAKDGRNPVQAADPSSEDKRAQ* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1217 414 ProSiteProfiles Tify domain profile. 284 319 IPR010399 -
Apr5g1217 414 MobiDBLite consensus disorder prediction 370 414 - -
Apr5g1217 414 PANTHER PROTEIN TIFY 8 53 413 - -
Apr5g1217 414 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 53 413 IPR040390 -
Apr5g1217 414 MobiDBLite consensus disorder prediction 1 60 - -
Apr5g1217 414 SMART tify_2 284 319 IPR010399 -
Apr5g1217 414 MobiDBLite consensus disorder prediction 8 22 - -
Apr5g1217 414 Pfam tify domain 288 318 IPR010399 -
Apr5g1217 414 MobiDBLite consensus disorder prediction 40 60 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1217 14 317 Tify Gene Family AT4G32570 37.421 6.14e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Apr5g1217 tify 1.6e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1217 - - gmx:100807222 662.144