Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1175 ATGGCGGTGGAGTTGATGGGGTTTCCAAAAATGAACGAACAGAAAGCAATGGAAGAGGCTGCATCGGAAGGATTAAAGGGAATGGAACACCTGACTCGTCTTCTCTCTAACCAACCCTCTCATCTACAAACTCAAATCACCGACGCCACCGTTTCCCACTTCAAAAAACTCATCTCCTTACTCAACCGCACCGGCCACGCCCGTTTCCGCCGCGCGCCGCTTCCTTCGTCTCCCTCTTCTTCTGTCTCTCCGCCACCGCCTAATCCGGTCACCCTTCACCACCCTCCTTCGAGCTTCGTCCCCACGCAGTCACACACTCTGACTCTCGATTTCTCAAAACCTAACATGTTCAGCTCCAATGCTAAGTCCATCGACCTCGAGTTCTCCAACCAAACATTCACCGTCTCCTCCAACTCCTCCTTCATCTCCTCCGCCATCACCGGAGACGGAAGCGTTTCCAACGGTAAACAAGGTTCCTCCATCTTCCTCACCCCACCGCCGCCTCCTCTCTCCGCCGGAAAACCCCCTATCTCATCGGTCACAGTCAAGAAGAGGTGCCACGACCACCGCGAACACTCCGACCATAACTCCGGCAAGATCTCCGGCTCCAACAAGTGCCACTGCATTAAGAGAAGGAAGAATCGTGTGAAGAAGACAATAAGAGTGCCGGCGATTAGTTCAAAGATCGCCGACATTCCGCCGGACGAGTACTCGTGGAGGAAGTACGGTCAAAAACCGATCAAGGGATCGCCGTATCCGAGGGGGTATTACAAGTGCAGTACGATGAGAGGGTGTCCGGCTAGGAAACACGTGGAGCGTGCTTCGGACGATCCAACGATGTTGATCGTGACGTACGAGGGGGAACACCGTCACTCTATTCATGCCGCGATGCAGGAGAATATTTCCGGGGGTTTGATATTTGAGTCAACATGA 933 0.5348 MAVELMGFPKMNEQKAMEEAASEGLKGMEHLTRLLSNQPSHLQTQITDATVSHFKKLISLLNRTGHARFRRAPLPSSPSSSVSPPPPNPVTLHHPPSSFVPTQSHTLTLDFSKPNMFSSNAKSIDLEFSNQTFTVSSNSSFISSAITGDGSVSNGKQGSSIFLTPPPPPLSAGKPPISSVTVKKRCHDHREHSDHNSGKISGSNKCHCIKRRKNRVKKTIRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTMRGCPARKHVERASDDPTMLIVTYEGEHRHSIHAAMQENISGGLIFEST* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1175 310 MobiDBLite consensus disorder prediction 78 94 - -
Apr5g1175 310 ProSiteProfiles WRKY domain profile. 228 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr5g1175 310 Pfam Plant zinc cluster domain 183 231 IPR018872 -
Apr5g1175 310 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 10 298 IPR044810 GO:0003700
Apr5g1175 310 SMART WRKY_cls 233 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr5g1175 310 MobiDBLite consensus disorder prediction 70 99 - -
Apr5g1175 310 SUPERFAMILY WRKY DNA-binding domain 231 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr5g1175 310 PANTHER WRKY PROTEIN 10 298 - -
Apr5g1175 310 Gene3D WRKY domain 217 293 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr5g1175 310 Pfam WRKY DNA -binding domain 235 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1175 Apr-Chr5 16217305 16218975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1175 1 309 WRKY Transcription Factor Family AT2G24570 62.154 2.62e-118 341
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr5g1175 WRKY 3.2e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1175 - - gmx:100127394 476.478