Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1168 ATGTGGTTGCCAAAGAATCAGTTAGACAAGAAGGATGGTGTGAATGGATTAATAGCAGTGGCAATAGATAAAGAAAAAGGAAGCCAAAATGCATTCAAATGGGCCGTTGACAATCTTCTCACCAGAAGTGCTACTGTAATTCTCATCCATGTCAAGCTTCTCTCTCATTCTTTTTCTCCGTCACCTTCTCTTTTCACCCCAAGAGGGATAAATGCTCTAATGGGTGATGGCAGTTCACTGGTTTGCAAAGAACCAGAAGGCCAAAACAAAAACGTTTTCCTTCCATATCGTGTCTTTTGTACACGGAAAGATATACAATGCAAGGATGTCCTACTAGAAGATATAGATGTATCCAAAGCTATAATTGAATATGCTTCTCAGACAGGAATTGAGCATCTGGTTCTTGGCTCTCCAGCAAAAACTGGTTTGCTTAAAAGATTCAAGGTATCAGATATTCCTGGAACAGTTGTAAAAGGGGCACCAGATTTCTGTACAGTCTATGTTATTTCTAAAAGTAAGATTCAATCGATTCGATCTGCTTCTCGTCCTGCTCCAGCCATTTTCCCTATGACCAACCAGGTCAGTCATAGTCAAGTTAGTATCAAGTCAAACACCTCAGACCCAAATATGCCATTGGTTCCAAGCGTAAAAGAGCAAGAATGGCATTCCTTTGAGGCACCACCACGTGGATCACATGAGGGAACAGATTCATTCAGGTCACCATTCACTAGGAAAGGTTACAGTGGCAGACCATATGGGGACCCTTCCAAGCCTGATACTGACATATTCTTTGTAAGCACTGGAAGGGCAAGCACAGACCGCACGTTCCCTTCACCATATATCAATTCAGAAACAGCAATGTCCAACCCTCGACTATCATATAGTTCAGAGACAGATGCAAACTACAGCTTTGAGTCAATGCATTATTATGGAAGGAAGTCTATGGACACCGGCACTCCTGAATTCTCATCTTTCTCATTTGATAGCGATAACCATTCATCTACTACATCACAAGGCGTGGTAAGGAAGGATGATATGGAGGCTGAAATGAGGAGATTGAAGTTGGAGTTGAAGCAAACAATGGAAATGTACAACACAGCCTGTAAGGAAGCATTCACAGCACAGCAGAAGGCAGTGGAACTTCAACGTTGGAAATTAGAGGAAGAGAGGAAATTGGAGGAGGCAAGGCTTGCTGAGGAGGCAGCATTGGCGATTGCAGAAAAGGAGAAAGCCAAGTCTAAAGCAGCCATTGAGGCTGCTGAAGCACAAAAAAGGATTGCAGAACTGGAAGCACAGAAGAGACTTAATGCAGAAATGAAAGCACTTAAAGAATCAGAAGACAAAAAAAAAGCACTTGATGCTTTAGTAAATGTAGATTGCAGGTATAGAAGGTACGCGATCGAGGAGATTGAAGCTGCAACAGATTTTTTTTCAGAGTCCCTGAAGATTGGAGAAGGAGGATATGGTCCAGTTTTTAAGTGCCTTTTGGATCATACACCTGTTGCAGTGAAGGTTCTACGCCCTGATGCACAACAAGGAAGGTCCCAGTTTCAAAGAGAGGTTGAGGTACTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCCTAGGAGCCTGTCCAGAATACGGTTGCCTTGTGTATGAGCACATGGCTAACGGAAGCTTGGACGATTGCCTCTTTCGGCGAGGCAACACTCCCCCACTTCCTTGGCAACTACGGTTCAAAATTGCAGCCGAAATTGGCACAGGCTTGTTGTTCCTTCACCAGAAAAAGCCAGAACCTCTGGTGCATAGGGACTTGAAACCAGCCAACATCTTGCTTGACAGAAACTATGTGGCCAAGATCAGTGATGTTGGTTTGGCAAGGCTAGTTCCATCATCTGTGGCTGACAGTGTCACACAATACCGCATGACATCCGCTGCAGGAACCTTCTGCTACATTGATCCTGAGTACCAGCAAACGGGTATGTTAGGAGTGAAATCAGATATATACTCACTTGGGATCATTTTCCTTCAAATTTTGACAGCAAGATCACCAATGGGTTTGGCCCATCTTGCTGGAAAATCCATTGAGAAGGGAACTTTTTCTGAGATGTTGGATCCAGCAGTGCCTGATTGGCCATTGGAAGAGGCCTTGAGTCTTGCAAAGTTGGCAGTGCAGTGTGCCGAATTGAGGCGCAAAGATAGGCCTGATCTTGGCAAGGTTATCTTACCAGAACTGAACAGGTTAAGAGACCTTGCTGAAAATAGTAATCTACTTTCAGTTTTGGCTAACTCTATGAATATGTCCCATGAGAGACAAGTTTCTGTGCAGCTGGATGGAGGGTGTCCTCCATTTGCTCACTCGGGGGAAATTAGAGCAAACTCATCAATCGGTGTCTGA 2382 0.4412 MWLPKNQLDKKDGVNGLIAVAIDKEKGSQNAFKWAVDNLLTRSATVILIHVKLLSHSFSPSPSLFTPRGINALMGDGSSLVCKEPEGQNKNVFLPYRVFCTRKDIQCKDVLLEDIDVSKAIIEYASQTGIEHLVLGSPAKTGLLKRFKVSDIPGTVVKGAPDFCTVYVISKSKIQSIRSASRPAPAIFPMTNQVSHSQVSIKSNTSDPNMPLVPSVKEQEWHSFEAPPRGSHEGTDSFRSPFTRKGYSGRPYGDPSKPDTDIFFVSTGRASTDRTFPSPYINSETAMSNPRLSYSSETDANYSFESMHYYGRKSMDTGTPEFSSFSFDSDNHSSTTSQGVVRKDDMEAEMRRLKLELKQTMEMYNTACKEAFTAQQKAVELQRWKLEEERKLEEARLAEEAALAIAEKEKAKSKAAIEAAEAQKRIAELEAQKRLNAEMKALKESEDKKKALDALVNVDCRYRRYAIEEIEAATDFFSESLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFRRGNTPPLPWQLRFKIAAEIGTGLLFLHQKKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPSSVADSVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARSPMGLAHLAGKSIEKGTFSEMLDPAVPDWPLEEALSLAKLAVQCAELRRKDRPDLGKVILPELNRLRDLAENSNLLSVLANSMNMSHERQVSVQLDGGCPPFAHSGEIRANSSIGV* 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1168 793 SMART serkin_6 477 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1168 793 CDD STK_N 17 171 - -
Apr5g1168 793 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 5 792 - -
Apr5g1168 793 Gene3D Transferase(Phosphotransferase) domain 1 550 762 - -
Apr5g1168 793 ProSitePatterns Serine/Threonine protein kinases active-site signature. 595 607 IPR008271 GO:0004672|GO:0006468
Apr5g1168 793 Pfam Universal stress protein family 18 158 IPR006016 -
Apr5g1168 793 Coils Coil 343 363 - -
Apr5g1168 793 ProSiteProfiles Protein kinase domain profile. 477 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1168 793 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 158 - -
Apr5g1168 793 PANTHER OS02G0152300 PROTEIN 5 792 - -
Apr5g1168 793 Coils Coil 381 439 - -
Apr5g1168 793 SUPERFAMILY Protein kinase-like (PK-like) 460 736 IPR011009 -
Apr5g1168 793 Gene3D HUPs 17 169 IPR014729 -
Apr5g1168 793 Pfam Protein kinase domain 479 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1168 793 MobiDBLite consensus disorder prediction 220 259 - -
Apr5g1168 793 Gene3D Phosphorylase Kinase; domain 1 456 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1168 Apr-Chr5 16155489 16161031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1168 1 770 Receptor kinase-like Gene Family AT1G78940 55.514 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Apr5g1168 Pkinase 5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1168 - - gmx:100803867 1153.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1168 5 16155489 16161031 Apr5g1168 5 16155489 16161031 ECH