Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1165 ATGGTTCATAAAAGAGAACACTGCCTTCTTATGCTCTTTATGTTCGCCACTTGTTTTTTGCCATCATTAGGTGACAACGCTCAAGTTTTGTTGAACTTCAGAAGCTCCTTGTCCAATGCTGATGCTTTAAACAACTGGGGGAACGAGGCTATCAATTTGTGTAGCTGGACTGGTATATTATGTGTCAATCTCACATTTCATGGTTTGAGACTAGAAAATATGGGACTAAGTGGAACAATTAACGTAGATGCGCTGCTTGAATTGTCTACTTTGAACACCTTTAGTGTTATTAACAATAGCTTTGAGGGTCCAATGCCTGCATTCAACAAGCTAGTGAAGTTAAGGGCATTGTTTCTGACCAATAACAAATTCTCTGGTGAAATTCCGAATGGTGCTTTTGAAGGCATGAAACGCCTCAAGAGAGTATTCTTGGCAGAAAATGGGTTCACGGGTCCTATTCCTATATCTCTTGCTATATTGCCTAAACTTGTGGATGTGGATTTGCATGGAAATAGTTTTGATGGTAACATACCAGAATTTCATCGGAGTGATTTCAGAGTGTTCAATTTATCAAACAACCGATTGGAGGGTCCAATACCAGAAAGCTTGAGCAACAAAGATCCAAGCTCATTTGTTGGCAATCAAGGTCTATGTGGAAAACCTCTAAGCCCTTGCCCCAGTATCACCCCCTCACCCTCAGGTCAACGGCCGAATTTGACTCATACAAACCAAGACGAAGAGCACAAGAAAAAGCGCCTCCTTTTAACCGCTATCGTAGTGGTGGGTGTGATTGTCATGGCTTCAGTAGTAGCACTTCTGTTCATCCGTTACCGTCGAAGGAAAAGTGGACAACCAGTGTCGGTGGTGGAGGAAGCACAGCCCCAGAACACAAACTCAGTCTCTAGTGGGTCGAAATCCATGGTTCTTGCCTCAAGTGAATCGAAGAAGAGTGAGGATGGAAGCTTGAACTTTGTTAGGAAGGAGAGGGAGGTGTTTGATTTGCAAGATTTGCTTAGGGCCTCAGCTGAGGTTTTGGGGAGTGGTAGTTTTGGATCCACGTACAAGGCTATGGTATTGAGTGGACCAGTTGTGGTGGTGAAGAGATTCAAGAACATGAACAATGTTGGGAAAAGAGACTTTTTTGAGCATATGAAAAGGCTTGGGAGGTTGACACACCCTAATCTACTCCCTCTTGTTGCATTCTACTATGGAAAACAAGAGAAACTTTTGGTTAATGACTTCGCTGAAAATGGCAGCTTGGCTTGTCATCTTCATGGTATGGTATACTGTGAGCTGGATTGGGGAACTCGATTGAAGATCATAAAAGGAGTGGGAAGGGGGTTAGCTTACCTATACAAAGAGTTCCCCGACAAAGACTTACCACACGGCCATCTTAAATCATCGAATGTAGTGCTGGACAATTCATTTGAACCTCGTTTGGCAGAGTATGGACTCGTGGCAGTGGTGGACAAGAGTCACGCTCAGCAATTCATGGTAGCTTATAAGTCTCCAGAGGTGAGCCAGAACGAGAGACCCAGTGAGAAGAGTGACGTTTGGTGTTTGGGGATACTAATATTGGAGCTTTTGACGGGAAAGTTTCCTGCGAATTATTTAAGGCATGGGAAGGGAGCGAGTGAGGATTTGGGTGAATGGGTGAAGTCAATTGCGAGGGAAGGGTGGAGCGGTGAGGTGTTTGATAAAGATATTATGGGGAGAAGGAGTGGGGAGGGTGAGATGTTGAAGTTGTTGAGAATTGGAATGGCTTGCTGTGAATGGGATTTGGAGAACAGGTTGGGTTGGAAGGAGGCAGTGGCAAAGATTGAAGAGTTGAAAGAAAGAGACAGTGTTGATGATGGAAGTGAGGGGATTGATCATCTCTACTCATCTACAAGTATCAGTCAGGATGACACTCTGTCTTTTGTTAGATGA 1929 0.4401 MVHKREHCLLMLFMFATCFLPSLGDNAQVLLNFRSSLSNADALNNWGNEAINLCSWTGILCVNLTFHGLRLENMGLSGTINVDALLELSTLNTFSVINNSFEGPMPAFNKLVKLRALFLTNNKFSGEIPNGAFEGMKRLKRVFLAENGFTGPIPISLAILPKLVDVDLHGNSFDGNIPEFHRSDFRVFNLSNNRLEGPIPESLSNKDPSSFVGNQGLCGKPLSPCPSITPSPSGQRPNLTHTNQDEEHKKKRLLLTAIVVVGVIVMASVVALLFIRYRRRKSGQPVSVVEEAQPQNTNSVSSGSKSMVLASSESKKSEDGSLNFVRKEREVFDLQDLLRASAEVLGSGSFGSTYKAMVLSGPVVVVKRFKNMNNVGKRDFFEHMKRLGRLTHPNLLPLVAFYYGKQEKLLVNDFAENGSLACHLHGMVYCELDWGTRLKIIKGVGRGLAYLYKEFPDKDLPHGHLKSSNVVLDNSFEPRLAEYGLVAVVDKSHAQQFMVAYKSPEVSQNERPSEKSDVWCLGILILELLTGKFPANYLRHGKGASEDLGEWVKSIAREGWSGEVFDKDIMGRRSGEGEMLKLLRIGMACCEWDLENRLGWKEAVAKIEELKERDSVDDGSEGIDHLYSSTSISQDDTLSFVR* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1165 642 PANTHER LRR RECEPTOR-LIKE KINASE 8 617 - -
Apr5g1165 642 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Apr5g1165 642 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Apr5g1165 642 Pfam Protein kinase domain 342 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1165 642 Gene3D Phosphorylase Kinase; domain 1 304 414 - -
Apr5g1165 642 MobiDBLite consensus disorder prediction 285 314 - -
Apr5g1165 642 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Apr5g1165 642 SUPERFAMILY L domain-like 46 205 - -
Apr5g1165 642 Gene3D Transferase(Phosphotransferase) domain 1 415 628 - -
Apr5g1165 642 SUPERFAMILY Protein kinase-like (PK-like) 343 609 IPR011009 -
Apr5g1165 642 ProSiteProfiles Protein kinase domain profile. 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1165 642 Gene3D Ribonuclease Inhibitor 186 225 IPR032675 -
Apr5g1165 642 MobiDBLite consensus disorder prediction 222 247 - -
Apr5g1165 642 MobiDBLite consensus disorder prediction 288 314 - -
Apr5g1165 642 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1165 Apr-Chr5 16142255 16145121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1165 9 631 Receptor kinase-like Gene Family AT4G31250 45.536 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr5g1165 Pkinase 3.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1165 - - gmx:100803999 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1165 5 16142255 16145121 Apr5g1165 5 16142255 16145121 ECH