Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1154 ATGGCAGCGACGGAGTCCGATCTGGATTATGAGTTTCTGAATCTCGATTACGAGCTTCGGTATCAGAGTCTCACCGGAATCGCCGCTTTCCAAAATTTCGCACCGGACGTGGTGACTTCATTTTCAACTTGTGGATTATCAGATCCCCTTTCTTCCCAAAACCTCACTCCCAAGCATTCCACCATCACTGCTACCATTGATTCTCAATCATCCATTAGTGGGACTGTTGGCAGCCCAGTGTCAGCTAATAAACCAAACGGCGGAGAGAATCATCTGAAAGGAGCTACAAGTGGTTCCTCTGAGCCGTCTGATGAGGATGATGAAGCTGGTCCTTGTGAACAGAGCACAAATCCTGTTGATATAAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCAGCAAGGAGATCAAGAAGAAGAAAACAAGCGCATTTGGCTGACCTTGAGTTGCAGGTTGAAAAACTGAAACTGGAAAATGCAACCCTATACAAGCAATTTACGGATGCTAGTCAACAATTTCGTGATGCTGATACGAATAACCGGGTGCTAAAATCAGATGTAGAAGCTTTAAGAGCTAAGGTTAAGTTAGCTGAGGATATGGTGGCGCGGAACTCTTTTACCACATTAAACAATCAGCTTCTTCAGACTCAGAATCAATTGAGCACATCACCACAACTCAACACAACTAGTCTCCGCCGCATTGCACACGTCTCGCCAACCATCACCGTCCATGGAAATGATGCCTCATACAATGGTGTCATGGGTGGACATAATTCAGCTCTTGGAAACTTGGATGTCACTTACAACGATGTCAACAATGGAGTCATAAGCGATGATATGAGTTGTGTGACTATCTGGCCTTGA 864 0.4514 MAATESDLDYEFLNLDYELRYQSLTGIAAFQNFAPDVVTSFSTCGLSDPLSSQNLTPKHSTITATIDSQSSISGTVGSPVSANKPNGGENHLKGATSGSSEPSDEDDEAGPCEQSTNPVDIKRLRRKVSNRESARRSRRRKQAHLADLELQVEKLKLENATLYKQFTDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVARNSFTTLNNQLLQTQNQLSTSPQLNTTSLRRIAHVSPTITVHGNDASYNGVMGGHNSALGNLDVTYNDVNNGVISDDMSCVTIWP* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1154 287 MobiDBLite consensus disorder prediction 66 119 - -
Apr5g1154 287 PANTHER BASIC LEUCINE ZIPPER 63 1 287 - -
Apr5g1154 287 Coils Coil 180 200 - -
Apr5g1154 287 MobiDBLite consensus disorder prediction 66 99 - -
Apr5g1154 287 Coils Coil 131 165 - -
Apr5g1154 287 PANTHER BZIP TRANSCRIPTION FACTOR 1 287 - -
Apr5g1154 287 SMART brlzneu 118 182 IPR004827 GO:0003700|GO:0006355
Apr5g1154 287 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 125 140 IPR004827 GO:0003700|GO:0006355
Apr5g1154 287 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 120 183 IPR004827 GO:0003700|GO:0006355
Apr5g1154 287 Gene3D - 121 177 - -
Apr5g1154 287 Pfam bZIP transcription factor 121 166 IPR004827 GO:0003700|GO:0006355
Apr5g1154 287 SUPERFAMILY Leucine zipper domain 122 172 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1154 Apr-Chr5 16081851 16087515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1154 36 287 bZIP Transcription Factor Family AT5G24800 48.679 1.54e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr5g1154 bZIP_1 2e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1154 K25784 - gmx:780555 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1154 5 16081851 16087515 Apr5g1154 5 16081851 16087515 ECH