Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1151 ATGCAAAAAGAAAAGGAAGCAATTATCAAGGAAGGGAAGGATATAGAAATGGAAGGAACTCGTGCAAAGGAGGAAACCCTACCGCCGGGATTTCGATTTCATCCAACAGATGAAGAACTTGTTACTTGCTATCTCGTAAATAAGATATCGGACTCTAATTTTACCGGCAGAGCAATAACTGATGTAGATCTGAACAAATGCGAGCCATGGGAGCTTCCAGGGAAGGCGAAGATGGGAGAAAAAGAATGGTACTTCTTCAGTCTGAGAGATCGTAAGTACCCAACAGGGGTGAGAACCAACAGAGCAACAAACACGGGGTATTGGAAAACCACGGGGAAAGACAAAGAGATCCTTAACAGTGTAACATCGGAGTTGGTTGGCATGAAGAAGACTTTAGTTTTCTACAAAGGAAGAGCTCCTAGAGGAGAGAAAAGTAACTGGGTCATGCATGAATACCGCATTCACTCAAAATCAACCTTCAGAACTAACAAGGATGAATGGGTGGTTTGTCGGGTATTTCAGAAGAGTGGTGGTGCAAAGAAGTACCCTTCATCCAACCATGCAAGAGCAGCGAATCCTTACAGCTTGGAACTAGGACCAAGTATTATACCCCCACCAATGATGCAACTGGGAGACCCAGCTTCTCATTTCCTTTATGGAAGAAATTACATGGCAAGTGCAGATCTAGCTGAAGTAGCAAGGATTTTGAGAGGGGGTGGATCAACCAGTAGTGTTAACGTACCAATGCAGTCTCAGTTTAGCTATCCTGTATCAGCAGCTGGAGGAGAATTCACCATTTCAGGACTTAATTTGAATCTTGGAGGAACAGCAGCAACCACTACACAACCCATTTTGCGGCCAATGCAACCTTCTCCACCTCTTACTCACACAATGGTTCAAGTACATGATGTTAGTTCCAACATGATGACACCTAGCTCTCTTGGTGCGGAGAATAACGCAGGTTTTGCCACAGAAATGAGCAACGCAAATTCTCATGGCAATAGGTATATGGGTATGGACAATTGCATGGATCTAGACAACTATTGGCCTTCCTACTAA 1059 0.4391 MQKEKEAIIKEGKDIEMEGTRAKEETLPPGFRFHPTDEELVTCYLVNKISDSNFTGRAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSVTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSTFRTNKDEWVVCRVFQKSGGAKKYPSSNHARAANPYSLELGPSIIPPPMMQLGDPASHFLYGRNYMASADLAEVARILRGGGSTSSVNVPMQSQFSYPVSAAGGEFTISGLNLNLGGTAATTTQPILRPMQPSPPLTHTMVQVHDVSSNMMTPSSLGAENNAGFATEMSNANSHGNRYMGMDNCMDLDNYWPSY* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1151 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 349 - -
Apr5g1151 352 SUPERFAMILY NAC domain 21 175 IPR036093 GO:0003677|GO:0006355
Apr5g1151 352 Gene3D NAC domain 36 178 IPR036093 GO:0003677|GO:0006355
Apr5g1151 352 ProSiteProfiles NAC domain profile. 27 175 IPR003441 GO:0003677|GO:0006355
Apr5g1151 352 Pfam No apical meristem (NAM) protein 28 154 IPR003441 GO:0003677|GO:0006355
Apr5g1151 352 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 12 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1151 Apr-Chr5 16062735 16065248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1151 21 352 NAC Transcription Factor Family AT2G24430 54.085 4.93e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr5g1151 NAM 3.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1151 - - gmx:100805060 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1151 5 16062735 16065248 Apr5g1151 5 16062735 16065248 ECH