Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1111 ATGGCAATGGCTTCATCCTTAATGTTACCAGCTGCAGCTATAGTGCTACCTTATACCACATCATCATCATCATCATCTACTTCAAGAAGATTTGCTCTCTTTCACCTTGTCACCACTGGTGCTATTGTTCTCCCAAAATCTCAGTTATTTGGTGCAAAAGAATCAGAGCTGTTTAAAGTAGCAGAGGCTAATGCTGTAGAAAAGCTAGAACAACCAGAACAAAATTTGTTTGACTGGGTCAAAAATGACAACCGAAGATTTCTCCATGCTGTGTACCGTGTTGGAGACTTGGATAAGACTATAAAGTTCTACAATGAATGCCTTGGCATGAAGCTACTTAGAAAACGTGACATACCAGAAGACAGATATACTAATGCTTTTCTTGGATATGGACCTGAAAATTCCAATTTTACCGTTGAAATTACTTATAATTATGGAGTGGATAACTACGATATTGGAAATGGTTTTGGTCATTTTGGTGTTGCAGTTGAAGATGTTGCAAAGACCATAGATCTAATAAAAGCAAAAGGGGGAAAGGTTACGAGGGAACCAGGGCCTAGTACAGATGGCAGTACAGTAATTGCTTTCATTGAAGATCCGGATGGTTATAAGTTTGAGCTTTTGGAGAGAAAACCCGGTCCTGAGCCACTATGCCAAGTGATGCTTCAAGTAGGTGATCTTGATCGTGCCATAGCCTTCTATCAAAAAGCTGTTGGCATGAAACTTCTCCGTGAGAGAGACAACCCCGAGAACAAGAACACAGTAGCCATCATGGGCTATGGTCCTGAAGATAAGAATACTGTTCTAGAACTGACATATAACTATGGCGTCACTAATTATGACAAAGGAAATGGTTATGAACAGGTTGCAATAGGCACAAATGATGTCTACAAGACTGCAGAAGCAATCAAATTATGTGGAGGGAAAATTATCCGTGAACCTGGGCCCTTGCCAGGTATCAACACCAAGATCGTAGCTTGCTTGGACCCTGATGGTTTGAAATTGGCGTTTGTTGATAATGTTGATTTTCTGAAGGAACTAGAGTGA 1047 0.405 MAMASSLMLPAAAIVLPYTTSSSSSSTSRRFALFHLVTTGAIVLPKSQLFGAKESELFKVAEANAVEKLEQPEQNLFDWVKNDNRRFLHAVYRVGDLDKTIKFYNECLGMKLLRKRDIPEDRYTNAFLGYGPENSNFTVEITYNYGVDNYDIGNGFGHFGVAVEDVAKTIDLIKAKGGKVTREPGPSTDGSTVIAFIEDPDGYKFELLERKPGPEPLCQVMLQVGDLDRAIAFYQKAVGMKLLRERDNPENKNTVAIMGYGPEDKNTVLELTYNYGVTNYDKGNGYEQVAIGTNDVYKTAEAIKLCGGKIIREPGPLPGINTKIVACLDPDGLKLAFVDNVDFLKELE* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1111 348 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 216 340 IPR037523 -
Apr5g1111 348 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 86 210 IPR037523 -
Apr5g1111 348 TIGRFAM glyox_I: lactoylglutathione lyase 75 219 IPR004361 GO:0004462|GO:0046872
Apr5g1111 348 TIGRFAM glyox_I: lactoylglutathione lyase 217 341 IPR004361 GO:0004462|GO:0046872
Apr5g1111 348 Gene3D - 59 212 IPR029068 -
Apr5g1111 348 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 85 216 IPR029068 -
Apr5g1111 348 CDD GlxI_Ni 88 208 - -
Apr5g1111 348 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 217 340 IPR029068 -
Apr5g1111 348 Gene3D - 213 348 IPR029068 -
Apr5g1111 348 PANTHER LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED 20 348 - -
Apr5g1111 348 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 219 336 IPR004360 -
Apr5g1111 348 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 88 207 IPR004360 -
Apr5g1111 348 ProSitePatterns Glyoxalase I signature 2. 153 165 IPR018146 GO:0004462|GO:0046872
Apr5g1111 348 PANTHER LACTOYLGLUTATHIONE LYASE 20 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1111 Apr-Chr5 15719566 15722479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1111 219 339 Calmodulin-binding Proteins AT1G08110 26.027 2.09e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1111 K01759 - gmx:100810908 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1111 5 15719566 15722479 Apr5g1111 5 15719566 15722479 ECH