Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1092 ATGGCCAAAGGCGCTTCAAATTCTTCAAAGACAAAGTCACTGACATTTATATGCCTCTTCATGTTCATGCTCAATTTCCACTCATCCCATGGTGAAGAAGAGCTTCAGCTTCTGTTATCCTTCAAAGCTTCCATCCACGACCCACTTCACTTTCTCTCCAACTGGGTCACTTCCTCTGCCACTGCCACAGCCACCACTCTTTGCAAGTGGCCCGGCATAACCTGCGACAACAACACTTCCCACGTTAACACTGTTGTGATATCAGGAAAAAACATCACTGGCGAGGTTCCTTCCTCCATTTTTCAACTCCCACACGTTTCAAGCCTCGATCTTTCCAACAATCAGCTTGTTGGGGAAATCACCCTCAATTATTCTCTTTCTTCTCTGTTTCCACTTCGTTACCTTAACCTCAGCAACAACAACCTCACGGGTTCTTTGCCTCGAACCTTGTTTTCCGTGTCATTTTCCAACCTCGAAACTCTGGATCTCTCCAACAACATGTTCTCTGGCAACATACCCGACCAAATTGCATTGCTTTTCAGCCTAAGGTATCTTGATCTTGGAGGAAACGTTTTGGTTGGAAAGATTCCAAATTCCATCACCAACATCACCACTTTACAGTATCTTACGTTGGCTTCAAACCAGTTAGTGGGTGAAATTCCAAAAGATATTGGCCTAATGAAGAACTTGAAGTGGATTTACTTGGGCTACAACAACCTTTCAGGTGAGATACCAAGTAGCATTGGAAACTTATTTTCTTTGAATCACCTTGATCTTGTTTACAACAATCTCACTGGACCAATTCCTCAATCTCTTGGACACCTCACCCAGCTTCAATATCTCTTTCTCTATCAAAACAAGCTAACTGGTCCAATTCCTTCATCCATTTATGAACTGAAAAAGCTCATTTCACTTGATCTAAGTGATAATTCTCTTTTTGGCGAGATTTCTGAGCTTATAGCGCAGCTCCAAAGACTAGAGATTCTTCACCTTTTCTCAAACAACTTCACAGGGGAGATTCCGAAGGCAATTGGATCTTTGCCTCACCTTCAGGTTCTTCAGCTTTGGTCAAACCAATTAACGGGTGGGATTCCAGAAGATCTAGGAAAGCATAGCAACCTCACTGTTTTGGACCTTTCCAGCAACAACCTCGCAGGGAAGATCCCAGAAAACTTATGTAACTCTTCCAATCTCTACAAACTCATCCTCTTCTCAAACTTTCTCCAAGGACAAATCCCACATAGCTTAACCTTTTGCCAAAGCCTACGCAGAGTGCGCCTCCAAAACAACAAGCTCTATGGAAAATTACCATCTGAATTGACCAAACTGCCTCAGATATACTTCTTGGATATCTCTGGCAACGAACTTTCTGGAAGGATCAATGACAGAAAATGGGACATGCCATCGCTTCAAATGCTAAGTTTAGCTAACAACAACTTCTCAGGAGAAATTCCTAACTCTTTCGGGAGTGACAAACTCGAAGGTTTGGACTTATCCAATAACCAATTTTCAGGTTCCATTCCTTCTGGTTTCAGAAACTTATCAGAACTCGTGCAATTGAAGCTAAGCAACAACGAACTCTTTGGGAACATCCCAGAAGAACTCTGTTCGTGCAAGAAGCTTGTGGCATTAGACCTCAGTCACAATCATCTCAGTGGTCAAATTCCGGTCAAACTCTCCGACATGCCGGTTCTTGGCCTCCTCGACTTGTCGGAAAACCAATTATCCGGCGAGATTCCACAGAACTTGGGAAGCGTGGAATCTCTCGTTCAGGTGAATATATCATACAACAACTTTCATGGAAGTTTACCTTCAACCGGTGCTTTCCTTGCCATCAATGCAAGTGCGGTAACCGGCAACGACCTTTGTGACCGTGACGGTGACACATCTAGTCGCTTGCCACCGTGCAAAACCGGTAACCAAAACCCAACTTGGCTTTTCATCATGCTGTGTTTTCTCTCAGCTTTGGTTGCGTTCGCGGCAGCTTCTTTTCTGGTGTTTTTCGTTCGTAGAAGGAAGAGTTTTTCGGAGGTGCGAAGAGTGGAGAATGAAGATGGCACGTGGGAATTGCAGTCTTTTGACTCAAAAGCTTCGAGGGTGATGAAAATGGAGGATGTTTTATCGTCGGTGAAAGAAGGGAAAGTGGTTTCGAAAGGAAAGAACTGGGTTTCCTACGAAGGGAAGTGCATGGGGAATGATGGTGACATGCAATTCGTGGTGGAGGAAATCAGTGACTTGAATTCGCTTCCGTTGAGTTTTTGGGAGGAGATGGTGAAGGTTGGGAAACTTGGGCACCCTAATATTGTTAAGCTTATTGGAATGTGTAGGTCTGGGAAGAGAGGGTACTTATTGTATGAAAACGTGGAGGGGAAGAAATTAAGCGAAGTTGTGAACGGTTTGAGTTGGCAAAGGAGAATGAAAATTGCTGTGGGCGTTGCAAAAGCACTTAAGTTCTTGCATTGTCATGCTTCATCCATGGTTTTGATTGGAGAGGTGTCACCAGAATCGGTTTGGGTGGACAACAATGGCGTTCCTCGCGTCAAACTCAGCCCTCTCGGAATGCCATTTTTGGATGTCAAAGGTTTCGTTTCTTCGCCCTACGTTGCCCAAGAGGCAAGAAAGAGAAAGGACATGACAGAGAAGAGTGAAATATATGGCTTGGGAGTTATGCTGATTGAATTATTGACGGGAAGAAGGTCCATGGACATAGAAGCAGGTAATGGCATGCACAAGACCATTGTGGAGTGGGCCCGCTACTGCTACTCAGACTGTCATCTTGACACGTGGATAGATCCTGTGATGAAGGGTGGAGATGCATTGACCTATCAGAACGACGTCGTTGAGACACTGAATCTGGCCTTGCGTTGTACCACCACTGATCCCACAGCAAGGCCATGCGCAAGAGACGTACTCAAAGCCCTAGAGTCTGTTCACAGCAACACAGCCACTTTTTGCTGA 2958 0.4469 MAKGASNSSKTKSLTFICLFMFMLNFHSSHGEEELQLLLSFKASIHDPLHFLSNWVTSSATATATTLCKWPGITCDNNTSHVNTVVISGKNITGEVPSSIFQLPHVSSLDLSNNQLVGEITLNYSLSSLFPLRYLNLSNNNLTGSLPRTLFSVSFSNLETLDLSNNMFSGNIPDQIALLFSLRYLDLGGNVLVGKIPNSITNITTLQYLTLASNQLVGEIPKDIGLMKNLKWIYLGYNNLSGEIPSSIGNLFSLNHLDLVYNNLTGPIPQSLGHLTQLQYLFLYQNKLTGPIPSSIYELKKLISLDLSDNSLFGEISELIAQLQRLEILHLFSNNFTGEIPKAIGSLPHLQVLQLWSNQLTGGIPEDLGKHSNLTVLDLSSNNLAGKIPENLCNSSNLYKLILFSNFLQGQIPHSLTFCQSLRRVRLQNNKLYGKLPSELTKLPQIYFLDISGNELSGRINDRKWDMPSLQMLSLANNNFSGEIPNSFGSDKLEGLDLSNNQFSGSIPSGFRNLSELVQLKLSNNELFGNIPEELCSCKKLVALDLSHNHLSGQIPVKLSDMPVLGLLDLSENQLSGEIPQNLGSVESLVQVNISYNNFHGSLPSTGAFLAINASAVTGNDLCDRDGDTSSRLPPCKTGNQNPTWLFIMLCFLSALVAFAAASFLVFFVRRRKSFSEVRRVENEDGTWELQSFDSKASRVMKMEDVLSSVKEGKVVSKGKNWVSYEGKCMGNDGDMQFVVEEISDLNSLPLSFWEEMVKVGKLGHPNIVKLIGMCRSGKRGYLLYENVEGKKLSEVVNGLSWQRRMKIAVGVAKALKFLHCHASSMVLIGEVSPESVWVDNNGVPRVKLSPLGMPFLDVKGFVSSPYVAQEARKRKDMTEKSEIYGLGVMLIELLTGRRSMDIEAGNGMHKTIVEWARYCYSDCHLDTWIDPVMKGGDALTYQNDVVETLNLALRCTTTDPTARPCARDVLKALESVHSNTATFC* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1092 985 PANTHER - 9 978 - -
Apr5g1092 985 Pfam Leucine Rich Repeat 229 251 IPR001611 GO:0005515
Apr5g1092 985 Pfam Protein kinase domain 752 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1092 985 Gene3D Ribonuclease Inhibitor 198 320 IPR032675 -
Apr5g1092 985 SUPERFAMILY L domain-like 308 604 - -
Apr5g1092 985 Gene3D Ribonuclease Inhibitor 31 197 IPR032675 -
Apr5g1092 985 SMART LRR_typ_2 227 251 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 155 179 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 347 371 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 467 490 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 492 513 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 562 586 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 275 299 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 514 538 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 372 395 IPR003591 -
Apr5g1092 985 SMART LRR_typ_2 129 153 IPR003591 -
Apr5g1092 985 Pfam Leucine rich repeat N-terminal domain 33 76 IPR013210 -
Apr5g1092 985 SMART LRR_sd22_2 227 253 - -
Apr5g1092 985 SMART LRR_sd22_2 490 516 - -
Apr5g1092 985 SMART LRR_sd22_2 155 174 - -
Apr5g1092 985 SMART LRR_sd22_2 275 301 - -
Apr5g1092 985 SMART LRR_sd22_2 371 394 - -
Apr5g1092 985 SMART LRR_sd22_2 179 205 - -
Apr5g1092 985 Gene3D Ribonuclease Inhibitor 321 643 IPR032675 -
Apr5g1092 985 SUPERFAMILY RNI-like 79 385 - -
Apr5g1092 985 SUPERFAMILY Protein kinase-like (PK-like) 713 978 IPR011009 -
Apr5g1092 985 Gene3D Transferase(Phosphotransferase) domain 1 787 983 - -
Apr5g1092 985 ProSiteProfiles Protein kinase domain profile. 664 981 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1092 985 Gene3D Phosphorylase Kinase; domain 1 675 786 - -
Apr5g1092 985 Pfam Leucine rich repeat 492 551 IPR001611 GO:0005515
Apr5g1092 985 Pfam Leucine rich repeat 325 384 IPR001611 GO:0005515
Apr5g1092 985 Pfam Leucine rich repeat 254 312 IPR001611 GO:0005515
Apr5g1092 985 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Apr5g1092 985 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 978 - -
Apr5g1092 985 ProSiteProfiles Leucine-rich repeat profile. 157 179 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1092 Apr-Chr5 15547304 15551623 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1092 19 975 Receptor kinase-like Gene Family AT2G25790 52.844 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Apr5g1092 Pkinase 1.8e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1092 - - gmx:100777118 1536.16