Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1076 ATGCCGCAAAAGTCCCAAAACCGGTATTTTGAAATGACCAAAATACCCCTCTTCTTTCTCGAATTTCCTTTCCATTTGTTAATCTTGCTCAGCGTCGCAGTACCCTCCAAAGTAATTTCGCAAACGGCAAGCACCGAACAAACAATTCTACTTACCATCAAAAGCCAACTGGGGGACCCACCGTCGCTCCAGTCGTGGAAACCGTCACCGTCCTCGCCGTGTAACTGGCCGGGAATCCAGTGCACCGGCGGCGTCGTCACGGAGCTGCTCCTTCCCAATAAAAGCATCACCACCCAGAAGCTCCCTTCCGTAATCTGCGACCTCAAGAATCTGAACAAGTTGAACCTCTCCGATAACTCAATCGCCGGCGGGTTTCCGACATGGTTGTACAACTGCTCCAACCTCCGGCAACTCGACTTATCGCAGAATTACTTCGCTGGCGTGATCCCCGGCGACATTGACCGCCTCAAAACGCTCACGCTCCTCAACCTCGGCGGGAACAGCTTCTCCGGCGAAATCCCGGCTGCGATCGGGAACCTGACGGAGCTGCAAACGCTGCACCTTTTCCAGAACAACTTCAACGGAACACTCCCCAAGGAAATCGGGAACTTGTCGAATCTCGAAAATTTGGGTTTGGCTTATAACTTTAAGCTTGTGCCCAAGGAGATACCTTTGGAGTATGGAAACCTGAGGAATTTGAAACTCATGTGGATGCCACAGAGTAACTTGATTGGCGAGGTTCCAGAAAGTTTCGGGAATCTCGTGAATCTGGAACAGTTGGATTTGTCAATAAACAGTTTAACAGGTAGCATTCCTAGGAGTTTGTTCTCGCTAAGGAAGTTGAAGTTTTTGTACCTATATAGAAATAGGTTATCGGGTGTGCTACCCAGTTCGGCGCAGGCTTTGAACTTGATCCAGATTGATTTGGCTTTTAACAATTTGACGGGTTCCATACCCCAAGAATATGGAAAGTTGAAGAATTTGACGATCTTGCACTTGTATTTTAATCAGTTGTCTGGTCAGATACCCACAAGCTTAAGCCTACTTCCAAGTCTTGTGGAATTCAGGGTGTTTGGCAATAAGTTGAATGGAACATTGCCTCCAGAACTAGGCCTGTATTCGAAGCTTGAGTATTTTGAAGTTTCTGATAATCAACTGAGTGGTGGGTTGCCACAACATTTGTGTGCTGGTGGTGCTTTGCTGGGTATGATTGCTTTTTCCAATAATCTTAGTGGGAACTTGCCTGAATGGCTTGGGAATTGTTCTTCTCTTATCAGGGTTCTGCTATCAGATAACAAGTTTGCAGGGGAGGTTCCTTCCGGTTTGTGGACTCTGAGGAACCTCTCAGCCTTGGTGTTGAGCAACAACTCCTTTTCTGGTCAACTTCCAAGTAAACTATCTTCGACTATGTCAAGGCTTGATATTAGAAACAACAACTTTTCAGGTCAGATATCCTCTGGAACCTCAAATCTAGTGGTTTTTGATGCAAGAAACAACATGCTTTCGGGTGAAATCCCAAGGGAATTGACGGGTTCTCGGCTTAATACTCTCATGCTTGATGATAATCAACTTTCTGGTGCACTTCCATCTCAGATAATCTCATGGCAATCACTAAATACTTTGACACTATCAAGAAACAAACTTTCAGGCCCTATCCCCATAGCTATGGCTAGTCTTCCTAACCTGGTTTACTTGGACTTGTCTCAAAATGCCATATCAGGTGAAATCCCACCTCAATTTGACCAATTGAAGTTGATTTTTCTCAACTTGTCCTCCAACCAGCTATCCGGGAACATCCCTGATGAGTTTAATAACCTTGCATTTGGAAAGAGTTTCTTAAACAATCCTCATTTATGTGCTTACAATCCAAAACTCAACCTTTCTAACTGCTTGACCAAAACCCTGCCACCCTCTAGCAATTCGTCTTCAAAACACCTTGTCTTGATTCTTTCCATCACCATCTTTGTGTTGCTGGTCACTGCCTCCTTGATCCTCTATACGTTGAAAAGGCACAGGGGCAAAAGGCACTGCAGGCGTAAAGTTTCAACGTGGAGGCTTACCTCATTCCAGAGGCTTGATCTCACTGAAATAAACCTCTTCTCAAGTTTGACAGATAATAACCTCATAGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATTGCTTCAAACCGTCCGGGTGAGTATGTTGCAGTGAAAAAGATTTGGAATTGCAAAGATGTGGATAACAAACTTGAGAAAGAATTCATGGCTGAGGTTGAAATCCTTGGCAATATTCGGCATTCCAATATAGTGAAGCTTTTATGTTGTTATTCGAGTGAGAACTCCAAACTTCTTGTTTATGAATACATGGAAAATCAAAGCCTTGATAAATGGCTTCACGGAAAGAAGAAAATATCAGCGACTGGGTTGAGTTGGCCAACGAGGTTGAAGATTGCCATAGGGGCTGCACAAGGCCTATGTTACATGCACCATGATTGCTCGCCACCCATTATCCACCGAGATGTCAAGTCCAGCAATATACTACTGGACTCAGAGTTCAGGGCTAGAATAGCAGACTTTGGACTCGCCAAGATGTTGGCAAAGCCTGGGGAGCCACACACCATGTCTGCTCTAGCAGGGTCATTTGGCTACATTCCACCAGAATATGCCTATTCAACTAAGATTAACGAAAAAGTGGATGTATATAGCTTTGGGGTTGTACTCCTAGAGCTTGTGACGGGAAGAGAGCCTAATAAAGGAGGTGAGCATGCAGGTAGCCTAGTTGATTGGGCGTGGCAGCATCATAGTGAAGGAAAGTGCCTTTCGGAGGCCTTCGATGAGGATATCAAAGAAACACGTTATGCAGAAGAGATGACTTGTGTCTTCAAATTAGGCCTCGTTTGCACAAGCTCGTTACCTTCGACAAGGCCTTCCGCTATAGAGATTTTGCAAGTCCTTCGTCAGTGTTGTCATTCAGGTTTTGCACGTAAACTACTAGCAACAGAGATTGATATTAGCCCTCTTCTTGCTGAAACAAGGTACATCTCTAGTTACAAGGATAGTAATGCTGTAAGCGAAAACGATGAAAGTAGCTTGTACAGCGTGTAA 3087 0.4477 MPQKSQNRYFEMTKIPLFFLEFPFHLLILLSVAVPSKVISQTASTEQTILLTIKSQLGDPPSLQSWKPSPSSPCNWPGIQCTGGVVTELLLPNKSITTQKLPSVICDLKNLNKLNLSDNSIAGGFPTWLYNCSNLRQLDLSQNYFAGVIPGDIDRLKTLTLLNLGGNSFSGEIPAAIGNLTELQTLHLFQNNFNGTLPKEIGNLSNLENLGLAYNFKLVPKEIPLEYGNLRNLKLMWMPQSNLIGEVPESFGNLVNLEQLDLSINSLTGSIPRSLFSLRKLKFLYLYRNRLSGVLPSSAQALNLIQIDLAFNNLTGSIPQEYGKLKNLTILHLYFNQLSGQIPTSLSLLPSLVEFRVFGNKLNGTLPPELGLYSKLEYFEVSDNQLSGGLPQHLCAGGALLGMIAFSNNLSGNLPEWLGNCSSLIRVLLSDNKFAGEVPSGLWTLRNLSALVLSNNSFSGQLPSKLSSTMSRLDIRNNNFSGQISSGTSNLVVFDARNNMLSGEIPRELTGSRLNTLMLDDNQLSGALPSQIISWQSLNTLTLSRNKLSGPIPIAMASLPNLVYLDLSQNAISGEIPPQFDQLKLIFLNLSSNQLSGNIPDEFNNLAFGKSFLNNPHLCAYNPKLNLSNCLTKTLPPSSNSSSKHLVLILSITIFVLLVTASLILYTLKRHRGKRHCRRKVSTWRLTSFQRLDLTEINLFSSLTDNNLIGSGGFGKVYRIASNRPGEYVAVKKIWNCKDVDNKLEKEFMAEVEILGNIRHSNIVKLLCCYSSENSKLLVYEYMENQSLDKWLHGKKKISATGLSWPTRLKIAIGAAQGLCYMHHDCSPPIIHRDVKSSNILLDSEFRARIADFGLAKMLAKPGEPHTMSALAGSFGYIPPEYAYSTKINEKVDVYSFGVVLLELVTGREPNKGGEHAGSLVDWAWQHHSEGKCLSEAFDEDIKETRYAEEMTCVFKLGLVCTSSLPSTRPSAIEILQVLRQCCHSGFARKLLATEIDISPLLAETRYISSYKDSNAVSENDESSLYSV* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1076 1028 ProSitePatterns Protein kinases ATP-binding region signature. 709 733 IPR017441 GO:0005524
Apr5g1076 1028 SMART serkin_6 703 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1076 1028 Gene3D Ribonuclease Inhibitor 43 196 IPR032675 -
Apr5g1076 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Apr5g1076 1028 SUPERFAMILY L domain-like 50 391 - -
Apr5g1076 1028 Gene3D Transferase(Phosphotransferase) domain 1 784 991 - -
Apr5g1076 1028 Gene3D Ribonuclease Inhibitor 197 301 IPR032675 -
Apr5g1076 1028 Gene3D Ribonuclease Inhibitor 302 395 IPR032675 -
Apr5g1076 1028 Pfam Leucine rich repeat N-terminal domain 46 81 IPR013210 -
Apr5g1076 1028 Pfam Leucine rich repeat 110 168 IPR001611 GO:0005515
Apr5g1076 1028 Pfam Leucine rich repeat 248 291 IPR001611 GO:0005515
Apr5g1076 1028 Pfam Leucine rich repeat 512 572 IPR001611 GO:0005515
Apr5g1076 1028 Gene3D Ribonuclease Inhibitor 396 469 IPR032675 -
Apr5g1076 1028 Gene3D Phosphorylase Kinase; domain 1 710 783 - -
Apr5g1076 1028 SUPERFAMILY L domain-like 407 619 - -
Apr5g1076 1028 SMART LRR_typ_2 325 349 IPR003591 -
Apr5g1076 1028 SMART LRR_typ_2 254 278 IPR003591 -
Apr5g1076 1028 SMART LRR_typ_2 445 469 IPR003591 -
Apr5g1076 1028 SMART LRR_typ_2 559 582 IPR003591 -
Apr5g1076 1028 SMART LRR_typ_2 108 132 IPR003591 -
Apr5g1076 1028 SMART LRR_typ_2 180 204 IPR003591 -
Apr5g1076 1028 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 27 990 - -
Apr5g1076 1028 Pfam Protein kinase domain 705 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1076 1028 ProSiteProfiles Protein kinase domain profile. 703 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1076 1028 Gene3D Ribonuclease Inhibitor 470 709 IPR032675 -
Apr5g1076 1028 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 27 990 - -
Apr5g1076 1028 SUPERFAMILY Protein kinase-like (PK-like) 697 979 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1076 Apr-Chr5 15423697 15427357 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1076 32 1021 Receptor kinase-like Gene Family AT5G25930 54.200 0.0 1025
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr5g1076 Pkinase 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1076 K00924 - gmx:100782466 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1076 5 15423697 15427357 Apr5g1076 5 15423697 15427357 ECH