Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1058 ATGAACCACCCATTCATCACCCTCTTAGTTATTGGACTCATCGTTTCCATACCCAGTAGTACTAGTAGTAGTAGTAGTACTAATTACAGTAACAACCAGTCACAGTTTTTTTCTCTGATGAAAGTCTCTCTCTCAGGAAAACACCCTCTAAATTGGGATGTTGAGAAACCTGTCTGCAGCTTCACAGGAGTTACCTGCAACACTGAGGGTGACGTCATCAATCTTGACCTTTCAGGTTGGTCTTCACTTTCTGGAAAGTTCCCTTCAGATATATGCACTTATCTCCCAGAGTTGCGTGTTCTACGCCTTGGCCACAACAGGTTCAAGTTCCTCACAGACACAATTCTCAACTGTTCCCACTTGGAAGTGCTTGACATGAACCGCATGTACCAAACTGGCACACTCCCAGATTTCTCTTCTTTGAAATCTCTTAAGATTCTCGACTTGTCCTACAACCTCTTCACAGGTGAGTTTCCCATGTCAGTGTTCAACCTCACCAATCTTGAAGTTCTTAACTTCAATGAAAACGGAGGCTTCAACCTGTGGCAGTTACCAACAGATATTGACAGGCTGAGAAATCTTAAGTCTATGGTGTTAACAACGTGCATGGTGCATGGTCAAATTCCAGCATCAATAGGGAACATAACTACTCTTGTTGATCTTGAACTGAGTGGGAATTTCCTCACAGGCCAAATTCCAAAAGAGCTTGGACTATTGAAGAAGTTGGAACAGCTTGAGCTCTACTATAATCAACACCTTGTTGGTAACATACCTGAGGAGCTAGGGAATCTCACAGAGCTAACGGATTTGGATATGTCAGTGAACAAGCTAAGTGGGAGTATTCCTGCATCTGTGTGTAGGCTTCCCAGGCTTCAAGTGTTGCAGCTTTACAACAATAGTCTCACAGGAGAAATCCCAGGTGCGATTGAAAACTCAACAACCTTAAAAATGTTGTCTCTTTATGACAACTTCCTGAGAGGACAAGTTCCCAAGAAACTGGGACAGCACTCGGGAATGATAGTTCTTGATTTGTCAGAAAACAGTTTATCTGGTCCGTTGCCAACTGAGGTTTGCAAGGGAGGTAAACTACTCTACTTTCTTGTTTTGGATAACATGTTTTCTGGTGAGATACCTGAGAGTTATGCAAACTGCATGGCGCTGTTGAGGTTTAGAGTGAGTAATAACCGTTTGGAAGGTTCCATTCCTGAGGGACTTCTTGGTCTACCTCATGTTTCAATTATTGATTTGAGTAACAATAATTTGACTGGTCCAATTCCTGACATTAATGGAAATTCTAAAAACTTGTCTGAACTGTTTCTGCAAAGGAACAGAATTTCAGGTGTCATAACTCCCACAATCTCTCTAGCTATTAACCTTGTCAAGATTGATTTCAGCTATAACCTTTTGTCTGGTCCAATTCCTTCAGAAATTGGCAACCTTAGAAGGCTTAATTTGCTTATGTTGCAAGGGAACAAATTGAGTTCTTCCATACCCGGTTCACTCTCTTCATTGGAGTCTCTCAACCTTCTTGATCTATCCAACAACCTTTTAACTGGGAGCATCCCTGAAAGCCTCTCTGTGTTGCTACCCAATTCCATTAACTTCTCACATAACTTGCTTTCGGGTCCAATTCCTCCCAAATTGATCAAAGGAGGTTTGGTTGAAAGCTTTTCAGGGAATCCTGGTTTGTGTGTGTTACCTGTGTATGCTAATTCATCGGATCAAAACTTTCCCATATGTTCAAGTGCTTACAAGAGTAGAAGGATAAACACCATCTGGGTAGCTGGGGTATCAGTGGTTTTGATCTTTATTGGAGCTGCCTTGTTTCTCAAACGTAGGTGCAGCAACGAGAGAAGTGCAGTGAAACATGAGGATACACTGTCTTCATACTTCTCTTATGAAGTTAAGAGTTTTCACAAGATCACTTTTGACCAAAGGGAGATCATAGAGTCCTTGGTGGATAAGAACATAATGGGGCATGGAGGGTCAGGGACAGTGTACAAGATTGAGTTGAAAAGTGGGGATATTGTTGCAGTGAAGAGATTGTGGAGTCGAAAATCCAAGGATTCAGCTCTAGAGGATCGATTGTTTGTGGACAAAGCATTGAAAGCCGAGGTGGAAACTCTGGGCAGCATAAGACACAAGAACATAGTGAAACTTTATTGCTGCTTTTCCAGCTTGGATTGCAGCTTGTTGGTTTATGAGTACATGCCAAATGGCAATCTTTGGGATTCCCTTCACGAAGGTTGGATCATTTTGGATTGGCCTACTCGTTATAGAATTGCACTGGGGATTGCACAGGGTCTAGCATACCTCCACCATGATTTGGTTCTTCCTATTATCCACCGAGACATCAAGTCAACTAATATCTTGTTAGATGTTGATTACCAGCCCAAGGTAGCAGACTTCGGGATTGCCAAGGTTTTGCAAGCAAGAGGTGGCAAGGATTCAACAACAACTGTTATTGCCGGAACATATGGTTACTTAGCCCCAGAACATGCATATTCATCAAGGGCCACCACCAAGTGTGATGTCTACAGTTTTGGGGTGATTTTGATGGAACTGTTAACTGGGAAGAAGCCAGTGGAGGCAGGATTTGGAGAGAACAGAAATATTGTTTTCTGGGTCTCAAACAAAGTAGAAGGCAAGGAAGGTGCTAGACCAACTGAGGTATTTGACTCCAGACTATGTTGTTCATTCAAAGATGACATGATCAAAGTGTTGCGGATTGCCATTCGCTGCACCTACAAAGCCCCTTCATGTAGACCAACCATGAAAGAGGTGGTTCAGCTTCTTATTGAGGCAGAGCCACGCAATTCCGATTCTTACAAGTTGTCAACCAAAGACATATCAAATCTCACCGTAACAAAGAAACCATTTGAATCATAA 2889 0.4233 MNHPFITLLVIGLIVSIPSSTSSSSSTNYSNNQSQFFSLMKVSLSGKHPLNWDVEKPVCSFTGVTCNTEGDVINLDLSGWSSLSGKFPSDICTYLPELRVLRLGHNRFKFLTDTILNCSHLEVLDMNRMYQTGTLPDFSSLKSLKILDLSYNLFTGEFPMSVFNLTNLEVLNFNENGGFNLWQLPTDIDRLRNLKSMVLTTCMVHGQIPASIGNITTLVDLELSGNFLTGQIPKELGLLKKLEQLELYYNQHLVGNIPEELGNLTELTDLDMSVNKLSGSIPASVCRLPRLQVLQLYNNSLTGEIPGAIENSTTLKMLSLYDNFLRGQVPKKLGQHSGMIVLDLSENSLSGPLPTEVCKGGKLLYFLVLDNMFSGEIPESYANCMALLRFRVSNNRLEGSIPEGLLGLPHVSIIDLSNNNLTGPIPDINGNSKNLSELFLQRNRISGVITPTISLAINLVKIDFSYNLLSGPIPSEIGNLRRLNLLMLQGNKLSSSIPGSLSSLESLNLLDLSNNLLTGSIPESLSVLLPNSINFSHNLLSGPIPPKLIKGGLVESFSGNPGLCVLPVYANSSDQNFPICSSAYKSRRINTIWVAGVSVVLIFIGAALFLKRRCSNERSAVKHEDTLSSYFSYEVKSFHKITFDQREIIESLVDKNIMGHGGSGTVYKIELKSGDIVAVKRLWSRKSKDSALEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFSSLDCSLLVYEYMPNGNLWDSLHEGWIILDWPTRYRIALGIAQGLAYLHHDLVLPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEHAYSSRATTKCDVYSFGVILMELLTGKKPVEAGFGENRNIVFWVSNKVEGKEGARPTEVFDSRLCCSFKDDMIKVLRIAIRCTYKAPSCRPTMKEVVQLLIEAEPRNSDSYKLSTKDISNLTVTKKPFES* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1058 962 Gene3D Ribonuclease Inhibitor 30 179 IPR032675 -
Apr5g1058 962 SMART LRR_typ_2 408 431 IPR003591 -
Apr5g1058 962 SMART LRR_typ_2 95 118 IPR003591 -
Apr5g1058 962 SMART LRR_typ_2 165 191 IPR003591 -
Apr5g1058 962 SMART LRR_typ_2 288 312 IPR003591 -
Apr5g1058 962 SMART LRR_typ_2 504 528 IPR003591 -
Apr5g1058 962 SMART LRR_typ_2 480 503 IPR003591 -
Apr5g1058 962 Gene3D Phosphorylase Kinase; domain 1 634 736 - -
Apr5g1058 962 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR1 9 944 - -
Apr5g1058 962 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 944 - -
Apr5g1058 962 SUPERFAMILY L domain-like 71 359 - -
Apr5g1058 962 SUPERFAMILY L domain-like 257 568 - -
Apr5g1058 962 Gene3D Ribonuclease Inhibitor 291 575 IPR032675 -
Apr5g1058 962 ProSitePatterns Serine/Threonine protein kinases active-site signature. 780 792 IPR008271 GO:0004672|GO:0006468
Apr5g1058 962 SUPERFAMILY Protein kinase-like (PK-like) 632 932 IPR011009 -
Apr5g1058 962 Gene3D Ribonuclease Inhibitor 180 284 IPR032675 -
Apr5g1058 962 SMART serkin_6 652 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1058 962 ProSiteProfiles Protein kinase domain profile. 652 939 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1058 962 Pfam Protein kinase domain 654 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1058 962 Gene3D Transferase(Phosphotransferase) domain 1 737 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1058 Apr-Chr5 15241849 15246758 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1058 30 938 Receptor kinase-like Gene Family AT5G49660 65.577 0.0 1204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr5g1058 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1058 - - gmx:100808284 1610.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1058 5 15241849 15246758 Apr5g1058 5 15241849 15246758 ECH