Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1057 ATGTTGCGACTCCTTTTTCTTCTCTTCCTCTCATTCTTCTCACTTCTCCCCACCGTCATATCTGACGACCGTCAAATTCTCCTGAAACTAAAATCATCCCTTCAGAACTCAAATTCCAAACTCTTTGACTCATGGAACGACACCAGTTCTGCGTGCAGTTTCGACGGCGTCGTTTGCAACTCCCTTCATTCCGTCACCGAAATCGACCTTTCCCATCGAACGCTATCCGGGGTTCTCCCTTTCGACTCTCTCTGCAACCTTTCATCGCTTCAGAAACTCGCGTTCGGTTTCAACAACTTGCACGGAAGAGTTGCAGAGGAGCTTAGGAACTGCGTTAAGTTGAAGTACTTGGACTTGGGCAACAACCGCTTCTCTGGTCCCTTCCCTGATATATCTCCTCTAAATCAATTGCAGTACCTATATTTGAACCAAAGTGGGTTTTCGGGAGCTTTTCCATGGCAGTCCCTGCTGAACATGACGCAAATGTTGCAGCTAAGTGTCGGAGATAACCCTTTCGATCTCACGCCGTTTCCTTCAGAGGTGGTGAGCCTCAAGAACTTGAATTGGCTCTATCTATCCAATTGCACTCTCGGTGGGAAACTACCGGTTGGGATTGGTAACCTCACGGAGCTTATCGATCTGGAATTCTCCAGCAATTTCATCACCGGCGATTTTCCCGCGGAAATCGGGAACCTTAGGAAACTGTGGCAGCTTGAGTTCTACGACAACTCCTTCACGGGAACGATTCCAATTGGGTTGAGAAACCTCACGGGGCTTAGCAATTTCGATGGGTCCTCGAACAAACTCGAAGGGGATTTGTCTGAGTTGAAGTACTTGAACAATCTGGTTTCGCTTCAACTTTTCGAGAACAATTTGTCTGGGGAGATTCCGGTTGAGTTAAGCGAGTTCAAACGCCTCAAGGCTCTGTCTCTGTACAGGAACAAATTGGTAGGTCCTATTCCTCAGAGAATTGGTTCTTGGGCCGACTTTGATTTCATCGACGTGTCGGAGAATTTCTTGACGGGTCCGATTCCGCCGGACATGTGCAAAATGGGCACGATGACCGCGCTGCTCGTGCTTCAGAACAACCTCACCGGCGAGATTCCGGCGAGTTATTGTAACTGTTTGACCCTGAAACGGTTCAGAGTAAGCAAAAACTCGCTCACCGGCACCGTCCCTCCGGCGATTTGGGGGTTGCCAAACGCGGAAATAATCGATATTGAAGTGAATGAGTTGGAAGGTTCGGTTACTTGGGATATCAAAAACGCGAAAAAACTCGCCAGTATATTAGCCAGGGGGAATCAATTATCCGGTGAATTACCTGAGGAAATCTCAAAAGCGACCTCGTTAGAGAGTATCGACCTGAGTGAGAATCAAATTACGGGGAACATTCCAGAAGCAATTGGCGAGCTTAAACAACTGGGTAGCCTTCATTTACAGTGCAACAAGTTAACCGGCTCCATACCGGAATCGTTAGGTTCCTGTAAATCGCTAAACGACATTGATATAGCAAAAAACTCACTCTCCGGAAAAATCCCATTGTCGTTTGGTTCTTTCCCCGCTCTGAATGCTCTTAACCTGTCAGAAAACGAACTCTCGGGTGAAATCCCGGGGAGCCTAGCGTTCCTCAGGTTGAGCCTCTTTGATTTATCGCATAACCGGTTAACCGGTCCGATTCCACAGGCTCTAACTATTCAAGCTTACAACGGAAGCCTCACCGGAAACCCCGGTTTGTGCAGCGTGGACGCCATTGGCACGTTCCCGCGTTGCTCTGCTTCCTCCGGCATGTCGAAGGACTTGCGTGCACTCATCATTTGCTTCGCGATAGCTTTGTTGTTGTTGCTCTCTTGCTTGGGAATTTACTTGCAGCTGAAGAAGAAGAAGAAGGACGAGGAGAAATACGGAAGAGGAGTGGGAGAGCGTTCGTTGAAGGAAGAATCTTGGGACGTGAAATCCTTCCACGTGTTAAGTTTCACGGAGGGGGAGATTCTAGATTCCATCAAGCAAGAGAATCTCATAGGAAAAGGAGGTTCAGGGAACGTGTACAGAGTCACGCTTTCCAACGGAAAAGAACTCGCGGTAAAGCATATATGGAACACCGATTTCACCACGGGAAAAAGGTCGTGGAGTGGAACTCCGATGCTTGCGAAGAGAAGTGGGAAATCGAAGGAGTTCGACGCGGAGGTGCAGGCTTTGAGCTCGGTGCGCCACGTGAATGTGGTGAAGCTTTATTGCAGCATAACGAGCGAGGATTCGAGTTTGTTGGTGTATGAGTATTTGCCCAATGGGAGCTTGTGGGATCGGCTTCACACGAGTAGGAAGATGGAGCTTGATTGGGAAACGAGGTATGAAATCGCGGTTGGCGCAGCCAAAGGGTTGGAGTATCTGCATCATGGGTGTGAGAGACCTGTAATTCATAGAGATGTTAAGTCTAGTAATATTTTGTTGGACGAGTTTTTGAAACCTAGGATCGCGGATTTCGGACTTGCTAAGATTGTTCAAGCCAACGTTGGCAAAGATTCTACTCACGTCATTGCCGGAACTCACGGTTATATTGCTCCTGAATATGGGTACACGTACAGGGTGAATGAGAAGAGTGACGTGTACAGTTTTGGAGTGGTGTTGATGGAGTTGGTGACGGGTAAGAGGCCAATAGAACCAGAATTTGGAGAAAATAAGGATATTGTGAGTTGGGTGCATATCAAGGCACGGGGGAAAGAGGGGCTTAGGAGTGCGGTGGATTCGAGGATCCCAGAGATGTATAGAGAGGAAGCTTGCAAGGTATTGAGAACAGCGGTTCTGTGCACTGCAACTCTTCCAGCTTTAAGACCCACCATGAGAGCTGTGGTTCAAAAGCTTGAGGATGCTGAGCCTTGTAAATTGGTTGGAATTGTCATTAGCAAAGACGGTAGTGGAAAGAAGATAGGAGTCAACGATAAATAA 2943 0.4784 MLRLLFLLFLSFFSLLPTVISDDRQILLKLKSSLQNSNSKLFDSWNDTSSACSFDGVVCNSLHSVTEIDLSHRTLSGVLPFDSLCNLSSLQKLAFGFNNLHGRVAEELRNCVKLKYLDLGNNRFSGPFPDISPLNQLQYLYLNQSGFSGAFPWQSLLNMTQMLQLSVGDNPFDLTPFPSEVVSLKNLNWLYLSNCTLGGKLPVGIGNLTELIDLEFSSNFITGDFPAEIGNLRKLWQLEFYDNSFTGTIPIGLRNLTGLSNFDGSSNKLEGDLSELKYLNNLVSLQLFENNLSGEIPVELSEFKRLKALSLYRNKLVGPIPQRIGSWADFDFIDVSENFLTGPIPPDMCKMGTMTALLVLQNNLTGEIPASYCNCLTLKRFRVSKNSLTGTVPPAIWGLPNAEIIDIEVNELEGSVTWDIKNAKKLASILARGNQLSGELPEEISKATSLESIDLSENQITGNIPEAIGELKQLGSLHLQCNKLTGSIPESLGSCKSLNDIDIAKNSLSGKIPLSFGSFPALNALNLSENELSGEIPGSLAFLRLSLFDLSHNRLTGPIPQALTIQAYNGSLTGNPGLCSVDAIGTFPRCSASSGMSKDLRALIICFAIALLLLLSCLGIYLQLKKKKKDEEKYGRGVGERSLKEESWDVKSFHVLSFTEGEILDSIKQENLIGKGGSGNVYRVTLSNGKELAVKHIWNTDFTTGKRSWSGTPMLAKRSGKSKEFDAEVQALSSVRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVQANVGKDSTHVIAGTHGYIAPEYGYTYRVNEKSDVYSFGVVLMELVTGKRPIEPEFGENKDIVSWVHIKARGKEGLRSAVDSRIPEMYREEACKVLRTAVLCTATLPALRPTMRAVVQKLEDAEPCKLVGIVISKDGSGKKIGVNDK* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1057 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Apr5g1057 980 CDD STKc_IRAK 673 954 - -
Apr5g1057 980 SUPERFAMILY L domain-like 266 588 - -
Apr5g1057 980 SUPERFAMILY Protein kinase-like (PK-like) 657 953 IPR011009 -
Apr5g1057 980 SUPERFAMILY L domain-like 59 365 - -
Apr5g1057 980 Pfam Leucine rich repeat 473 532 IPR001611 GO:0005515
Apr5g1057 980 Pfam Protein kinase domain 669 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1057 980 Gene3D Phosphorylase Kinase; domain 1 651 759 - -
Apr5g1057 980 Gene3D Transferase(Phosphotransferase) domain 1 760 962 - -
Apr5g1057 980 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Apr5g1057 980 Gene3D Ribonuclease Inhibitor 21 175 IPR032675 -
Apr5g1057 980 SMART serkin_6 667 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1057 980 PANTHER UNNAMED PRODUCT 6 973 - -
Apr5g1057 980 ProSiteProfiles Protein kinase domain profile. 667 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g1057 980 Gene3D Ribonuclease Inhibitor 176 276 IPR032675 -
Apr5g1057 980 Gene3D Ribonuclease Inhibitor 277 591 IPR032675 -
Apr5g1057 980 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Apr5g1057 980 PANTHER RECEPTOR-LIKE PROTEIN KINASE HAIKU2 6 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1057 Apr-Chr5 15228416 15232127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1057 5 973 Receptor kinase-like Gene Family AT1G09970 62.602 0.0 1182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr5g1057 Pkinase 4.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1057 - - gmx:100779554 1567.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1057 5 15228416 15232127 Apr5g1057 5 15228416 15232127 ECH