Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1056 ATGACAACATCCCCAAACACGCCCCAACAAAACGTTCAGCAATCGTTCGAAGCCTTCTACCAGAAGTGGCTTTCAAGTCAAGAGAATTTACTAGAACGGCTTCTCACGGTGTCCGCAATGCCCGATTCAGCCGCCGAAGTAGAGCGCCGGAGCAGGCTAATCGAAGAGGTGATGTGTCATTACCGGCAATACTTGGAAGAGAAATCGAAGGTGGCGTCCGTGGACGTGTTCCTTCTATTTTCCCCGACGTGGCTTTCTGCGTACGAAGGAGCTTTGCTATGGATTGGGGATTACAAGCCTTCGCTGATTCTCCGTCTGGTAGACGGCGCCGTGGAGGGTTTAACGGCGGAGCAGAGGGAGAGGGTGGAGCGAATGAGGGAAGAGACGAAGAGAGCGGAGAGAGAGGTGTCGGAGGCAATGGCAAGTGTTCAAGAGAGCATGGCGAGTCCGCGCGTGGTAGGACTGGTGAGGGTGTTGGACGGAGAGATAACGGAGTTGGAATCAGCGATTGAGGGGCTGAAGAGGGCACTGGTGAGGGTTTGGAAGAGAGCGGATGAGCTTCGTGCGTCCACGGTGAGGAAGGTGGTGGGGATTCTGAGTCCGCCGCAGACGGTGCAGTTTCTGGCGGCGACGATGCTCTTTCAGATGAGGGTACGGAAGTGGGGTTTGCAGAGAGACGAGGTCGACGGGGGACCCTCCTCTTGA 705 0.5603 MTTSPNTPQQNVQQSFEAFYQKWLSSQENLLERLLTVSAMPDSAAEVERRSRLIEEVMCHYRQYLEEKSKVASVDVFLLFSPTWLSAYEGALLWIGDYKPSLILRLVDGAVEGLTAEQRERVERMREETKRAEREVSEAMASVQESMASPRVVGLVRVLDGEITELESAIEGLKRALVRVWKRADELRASTVRKVVGILSPPQTVQFLAATMLFQMRVRKWGLQRDEVDGGPSS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1056 234 ProSiteProfiles DOG1 domain profile. 13 228 IPR025422 GO:0006351|GO:0043565
Apr5g1056 234 PANTHER TRANSCRIPTION FACTOR HBP-1B 4 227 - -
Apr5g1056 234 Coils Coil 115 142 - -
Apr5g1056 234 PANTHER - 4 227 - -
Apr5g1056 234 Coils Coil 156 176 - -
Apr5g1056 234 Pfam Seed dormancy control 46 107 IPR025422 GO:0006351|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1056 15 219 Calmodulin-binding Proteins AT5G10030 31.553 6.68e-22 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1056 - - aprc:113865861 444.891