Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1055 ATGGCGAATACCGACACTCAACGTAACCACCCTCGCCAACAGCGTCGTTCCAAACCTCGATCAGCGGCTCGACCGGCGGTGAAGCCAAGGGTTCCGCTCAGGTTGTTGCTGCGGATTGCGTCGGTAGCCGGTGGCATTCAGTTTGGGTGGGCCTTGCAGCTTTCTCTTCTCACGCCGTACGTGCAGCAGCTCGGGATCCCGCACGTGTGGGCCAGTATTATATGGCTCTGTGGGCCCCTCTCTGGCCTCCTCGTTCAGCCTCTCGTCGGCCACATGAGCGATCGCTGCACCAGCAAGTTCGGTCGCCGGAGACCGTTTATTTTGGGCGGAGCATTGTCGATTGTCGTCGCCGTTCTCATCATTGGTCATGCCGCCGACGTTGGCTGGTGGCTTGGCGATACTACCAACCATCGCCCCTGGGCTGTCGTCGTTTTCGTTTTCGGCTTCTGGATTTTGGATGTGGCTAACAACGTCACTCAGGGTCCTTGTAGAGCTTTGCTTGGCGATCTCACTGGCAAGGATCATCGAAGAACACGCGTGGCAAATGCTTATTACTCCCTGTTTATGGCTGTTGGTAACATTCTTGGATATGCAGCTGGATCATACAGTGGTTGGTACAAGGTCTTTGCTTTTACAGTTACCCCTGCATGCAATATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTCCTTGACATTGTTTTCATTGCCATCACCACCTATATCAGCATCACAGCAGCTCATGAAGTGCCTTTAAGTTCAAGTGTGGCACAAGATTCTGAAGCAACAGAGGAGTCAGGAACTGCCGGAGAAGCTTTCCTGTGGGAGCTATTTGGGACATTCAGATATTTTTCAACTCCTATATGGACAATACTGTCTGTTACTGCTCTAACATGGATTGCATGGTTTCCATTTCTTCTATTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAGCCAAATGAAGGCACTAATTATGATGATGGAGTTAGAATGGGGGCAATTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACGTCAGTACTCATGGAGAGGCTATGCAGGAAGCGGGGGCCTGGGTTTGTGTGGGGAATCTCAAATATTCTAATGGCTGTCTGCTTTGTTGCAATGCTTGTTGTAACCTATGTGGCAAATAACAGTGGCTATTTAGGCAAAGATCTACCACCAACCAGCATTGTGATAGCTTCATTGATAATCTTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATTCAGTCATTGGGGCTTGGCCAAGGATTGTCAATGGGAGTCCTAAATCTTGCAGTAGTGATCCCACAGATGGTGGTGTCCGTGGGAAGTGGACCATGGGATCAGCTATTTGGTGGAGGAAACTCTCCGGCCTTTGCTGTGGCCGCTGTTGCAGCCATTGTCAGTGGATTCATAGCTGTCTTTGCCATTCCTCGATCTGGTGGTCAAAAGCCTAGAAGCCAAGTGTGA 1518 0.4908 MANTDTQRNHPRQQRRSKPRSAARPAVKPRVPLRLLLRIASVAGGIQFGWALQLSLLTPYVQQLGIPHVWASIIWLCGPLSGLLVQPLVGHMSDRCTSKFGRRRPFILGGALSIVVAVLIIGHAADVGWWLGDTTNHRPWAVVVFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYYSLFMAVGNILGYAAGSYSGWYKVFAFTVTPACNISCANLKSAFFLDIVFIAITTYISITAAHEVPLSSSVAQDSEATEESGTAGEAFLWELFGTFRYFSTPIWTILSVTALTWIAWFPFLLFDTDWMGREIYGGEPNEGTNYDDGVRMGAIGLLLNSVVLGITSVLMERLCRKRGPGFVWGISNILMAVCFVAMLVVTYVANNSGYLGKDLPPTSIVIASLIIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAVVIPQMVVSVGSGPWDQLFGGGNSPAFAVAAVAAIVSGFIAVFAIPRSGGQKPRSQV* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1055 505 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 12 503 - -
Apr5g1055 505 TIGRFAM GPH_sucrose: sucrose/H+ symporter 31 496 IPR005989 GO:0005887|GO:0008515|GO:0015770
Apr5g1055 505 Pfam Major Facilitator Superfamily 46 450 IPR011701 GO:0022857|GO:0055085
Apr5g1055 505 Gene3D MFS general substrate transporter like domains 33 493 IPR036259 -
Apr5g1055 505 MobiDBLite consensus disorder prediction 1 26 - -
Apr5g1055 505 SUPERFAMILY MFS general substrate transporter 34 498 IPR036259 -
Apr5g1055 505 CDD MFS_SLC45_SUC 36 491 - -
Apr5g1055 505 PANTHER SUGAR TRANSPORTER 12 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1055 Apr-Chr5 15198709 15212532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1055 1 501 Sucrose Transporter Gene Family AT1G09960 68.566 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1055 K15378 - gmx:100787939 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1055 5 15198709 15212532 Apr5g1055 5 15198709 15212532 ECH