Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1032 ATGAAAGGGGAATACGTAGAGCAACAACATTCTAAGACCGAAACGCCTACTATGTTCTCAAAGCTTCAACCTCAACCCTTCTCTCACAACCCTTTCCAACTCTCCACGGAAGAAGATAACCGGGCCGCCGCCACACCCAACACTGCCCATAAGCCCAACTCCTCTGGCGACGGTGCCACCATTGAGGTTGTCAGAAGGCCCAGGGGCCGTCCGCCCGGCTCCAAAAATAAGCCCAAGCCACCCGTTATCATTACCCGTGACCCTGAACCCGCTATGAGCCCTTACATTCTCGAAGTATCTGGAGGAAACGACGTCGTCGAGGCCATCGCGCACTTCAGTCGCCGCAAGAACATGGGCATCTGCGTCCTCACCGGTTCCGGAACCGTTGCTAACGTCTCTCTCCGTCAACCGTCCACCACTACCGGCGCCACCGTTACTTTTCACGGCCGTTTCGATATTCTCTCCGTTTCCGCCACCTTCCTCCCCCAACAATCCGGTGCGTCGCCGGCGGTTCCCAACGGTTTCGCCATCTCCCTCGCCGGACCTCAGGGGCAGATCGTCGGAGGACTTGTCGCCGGGGGGTTGATGGCTGCGGGGACGGTGTTCGTCATAGCCGCTTCGTTCAACAACCCAGCGTATCACAGGCTGCCGCCGGAGGAAGAGGGTCGGAACTCGGCCTCCGCCGGCGAGGGACATTCGCCGCCGGTTTCGGGGGGCGAAAGTGGGCATGCCCAAGCCGAGTCTTGTGGAATGTCCATGTACAGCTGTCAAAACTATCCCTCAGATGTGATTTGGGCTCCGACAGCAAGACCACCACCGCCGCCACCTTATTGA 834 0.5887 MKGEYVEQQHSKTETPTMFSKLQPQPFSHNPFQLSTEEDNRAAATPNTAHKPNSSGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPAMSPYILEVSGGNDVVEAIAHFSRRKNMGICVLTGSGTVANVSLRQPSTTTGATVTFHGRFDILSVSATFLPQQSGASPAVPNGFAISLAGPQGQIVGGLVAGGLMAAGTVFVIAASFNNPAYHRLPPEEEGRNSASAGEGHSPPVSGGESGHAQAESCGMSMYSCQNYPSDVIWAPTARPPPPPPY* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1032 277 MobiDBLite consensus disorder prediction 1 88 - -
Apr5g1032 277 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 210 IPR005175 -
Apr5g1032 277 Gene3D - 93 230 - -
Apr5g1032 277 ProSiteProfiles PPC domain profile profile. 89 229 IPR005175 -
Apr5g1032 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 9 276 - -
Apr5g1032 277 MobiDBLite consensus disorder prediction 213 247 - -
Apr5g1032 277 MobiDBLite consensus disorder prediction 10 55 - -
Apr5g1032 277 CDD DUF296 94 208 IPR005175 -
Apr5g1032 277 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 224 - -
Apr5g1032 277 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 276 IPR014476 GO:0003680
Apr5g1032 277 PIRSF ESCAROLA 6 269 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1032 Apr-Chr5 14918517 14920424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1032 1 274 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 60.764 4.25e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1032 - - gmx:100815772 430.639