Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1025 ATGGCTGCGGTGCCGGAAAACCTAAACAGAGAACAATACGTGTACCTTGCGAAGTTGTCGGAGCAAGCGGAGAGGTACGAGGAGATGGTGGAGTTCATGCAGAAGGTGGTGGTGGGGTGGACCCCAGCTTCGGAATTGAGTGTGGAGGAGAGGAACCTGTTGTCTGTGGCCTACAAAAACGTGATCGGGTCTCAGCGAGCGGCGTGGAGGATTGTGTCTTCCATTGAACAGAAGGAAGAGGGTCGCAAGAACGATGACCACGTGGCACTTGTCAAGGAATATAGATCCAAGGTGGAGAATGAGCTGACTCAGGTTTGTGCTAGTATCCTCAAACTCTTGGAGTCCAATCTTGTTCCCTCTGCCTCCGCTAGCGAGTCCAAGGTTTTCTATTTGAAAATGAAAGGCGATTATCATCGCTATTTAGCAGAGTTTAAGGTTGGGGATGAGAGGAAAACCGCTGCTGAGGATACGATGTTGTCTTACAAGGCTGCCCAGGATATTGCTTATGTGGATCTTCCCCCTACTCACCCCATAAGACTGGGTCTGGCTCTTAATTTCTCTGTCTTCTATTATGAAATTCTCAACCAGTCTGATAAAGCATGTGGGATGGCTAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAAGACAGCACTCTCATAATGCAACTTCTAAGAGACAACCTCACCCTTTGGACTTCTGATGTCCAGGACCAGCTAGATGAGCCCTGA 756 0.4868 MAAVPENLNREQYVYLAKLSEQAERYEEMVEFMQKVVVGWTPASELSVEERNLLSVAYKNVIGSQRAAWRIVSSIEQKEEGRKNDDHVALVKEYRSKVENELTQVCASILKLLESNLVPSASASESKVFYLKMKGDYHRYLAEFKVGDERKTAAEDTMLSYKAAQDIAYVDLPPTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1025 251 ProSitePatterns 14-3-3 proteins signature 2. 223 242 IPR023409 -
Apr5g1025 251 PRINTS 14-3-3 protein zeta signature 45 74 IPR000308 -
Apr5g1025 251 PRINTS 14-3-3 protein zeta signature 94 118 IPR000308 -
Apr5g1025 251 PRINTS 14-3-3 protein zeta signature 125 147 IPR000308 -
Apr5g1025 251 PRINTS 14-3-3 protein zeta signature 160 186 IPR000308 -
Apr5g1025 251 PRINTS 14-3-3 protein zeta signature 187 213 IPR000308 -
Apr5g1025 251 PRINTS 14-3-3 protein zeta signature 214 243 IPR000308 -
Apr5g1025 251 PANTHER 14-3-3 PROTEIN 4 250 IPR000308 -
Apr5g1025 251 PANTHER 14-3-3 PROTEIN 10 4 250 - -
Apr5g1025 251 SUPERFAMILY 14-3-3 protein 8 243 IPR036815 -
Apr5g1025 251 Gene3D - 1 250 IPR036815 -
Apr5g1025 251 PIRSF 14-3-3 5 250 IPR000308 -
Apr5g1025 251 SMART 1433_4 10 250 IPR023410 -
Apr5g1025 251 Coils Coil 16 36 - -
Apr5g1025 251 Pfam 14-3-3 protein 16 241 IPR023410 -
Apr5g1025 251 ProSitePatterns 14-3-3 proteins signature 1. 51 61 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1025 Apr-Chr5 14859251 14861919 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1025 7 245 14-3-3 family AT5G10450 84.519 2.18e-153 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1025 K06630 - gmx:100818967 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1025 5 14859251 14861919 Apr5g1025 5 14859251 14861919 ECH