Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1023 ATGGCACCCAGTTTTGACTGTGTTTCGAGCCTCCTTTGTACAGAGGATAGCAGTGTTTTCGACGATAGCCATTATGGGGGTACGGTGGAGGGGTACGAGGACACGTGGCGTCCTAGGTACCATGAAAGGAGCCAACACTTTGTTGACGCAGACGGGTTGCCATTGCAGAGTGATGAGTGCTTGGCGTTAATGGTGGAAAAGGAATGCCAACACTGTCCTCGTTCTAATTACTTGAATAAGCTACGAAGTGGGGATTTGGACTTCGGGGCCAGAATGGAGGCCATTGATTGGATTCAAAAGGTCCGAGCGCATTTTGGTTTTGGTCCTCTCTGTGCATACCTATCTATAAATTACTTGGATCGATTCCTTTCTGCTTATGAATTACCAAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTGGCTTGCTTGTCTCTGGCAGCCAAAGTGGAAGAGACTGAAGTTCCGCTATCTCTTGATTTGCAGGTGGGTGAATCAAAGTTTGTATTTGAAGCTAAAACTATACAGAGAATGGAGCTTCTAGTTCTAAGCACACTAAAGTGGAGAATGCAGGCAATTACTCCTTTCTCTTTCCTAGATTATTTCCTTTGCAAGATCAACGGTGATCAAAGCCCATTAAGATCTTCAATTATGCGATCCATCCAACTTATATCAAGCACTGTTAGAGGGATTGACTTCTTGGAATTCAAACCATCAGAAATTGCCGCAGCAGTGGCTGTGTATGTGATGGGAGAAGAAACCCAAACAGTTGACACTGGGAAAACAATTTCTGTTCTGATTCAACACGTAGAAAAGGAGAGATTATTGAAATGTGTTAAAATGATCCACGAGCTGTCATCCAACAGTGCCTCTGCCAAGGATTCCAGTGCTTCCGTCACTTGTGTGCCACATAGCCCAATAGGGGTGTTAGAAGCATTATGTTTCAGCTACAAAAGTGATGACACAAATGCTAGTTCATGTGCAAACTCTTCACATAATAGCCCTGATGCCAAAAGGAGGAAGCTAAACAAAACCTGTGCAGCAGAGCTATTATAG 1056 0.4403 MAPSFDCVSSLLCTEDSSVFDDSHYGGTVEGYEDTWRPRYHERSQHFVDADGLPLQSDECLALMVEKECQHCPRSNYLNKLRSGDLDFGARMEAIDWIQKVRAHFGFGPLCAYLSINYLDRFLSAYELPKGRAWTMQLLAVACLSLAAKVEETEVPLSLDLQVGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFLDYFLCKINGDQSPLRSSIMRSIQLISSTVRGIDFLEFKPSEIAAAVAVYVMGEETQTVDTGKTISVLIQHVEKERLLKCVKMIHELSSNSASAKDSSASVTCVPHSPIGVLEALCFSYKSDDTNASSCANSSHNSPDAKRRKLNKTCAAELL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1023 351 Pfam Cyclin, N-terminal domain 61 190 IPR006671 -
Apr5g1023 351 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 344 - -
Apr5g1023 351 SMART Cyclin_C_2 193 304 IPR004367 -
Apr5g1023 351 SMART cyclin_7 96 184 IPR013763 -
Apr5g1023 351 Pfam Cyclin, C-terminal domain 193 293 IPR004367 -
Apr5g1023 351 PANTHER CYCLINS 1 344 IPR039361 -
Apr5g1023 351 SUPERFAMILY Cyclin-like 55 190 IPR036915 -
Apr5g1023 351 Gene3D - 63 281 - -
Apr5g1023 351 CDD CYCLIN 91 183 IPR013763 -
Apr5g1023 351 ProSitePatterns Cyclins signature. 91 122 IPR006671 -
Apr5g1023 351 Gene3D - 74 191 - -
Apr5g1023 351 SUPERFAMILY Cyclin-like 175 302 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1023 Apr-Chr5 14839892 14841836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1023 64 328 Core Cell Cycle Gene Families AT2G22490 51.471 4.46e-86 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1023 K18810 - gmx:547739 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1023 5 14839892 14841836 Apr5g1023 5 14839892 14841836 ECH