Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1022 ATGGGAAAAGATTGTGGAACTTGGATACCGCATCTACAATTTGGATGGCAATCACCAAATTTGAATCCCCTTGATGTGGGGAAGCAAAATGGTATTTCTGCAGCTATGAACCCTGGTGTTAATATGATCTCTATTAATGAGACAATGCCAGCTTTTGCATCCTCTGCACTGCCTTATTTGCAGTTAGGAAATTCCAATGAACCACGTGGTTGGTTTTATGGTTTGCCTCGCTTTAGACAGGGATTTACTCCTGCTACAAACTTCACTGCTGAGGGAAAAACCCCTGATGACCATATTAAGGGTTTTAGGGAGAAAATTGCTCGCTATGGTGGTTCAAGTACCCCTCAGAAACGATTTCTTGTTATTGACCAGACGGGTGGTCAAACAACTATTGTTTATAGTTCTAGGTTTGGGAGTCCCGGAGAGTGCATTGCTTCTTGGCATTCAAATCTGCATGGTGCTAACTATATGAGTAGAAATGGACCTTCTTTTAGAACAGATTTGAATTTGAATCAGAATCCGAATCAGAATCAGAATCATATGATTGAGTCAACTTTGACCGATAAAGTCAATGAGAATCAGGGCACTGGCATTGAAAGTGAGATGCATGAAGACACGGAAGAAATTAATGCATTGCTTTACTCGGACAGTGATGACTATTCTAGTGAGGATGATGATGAAGTTACTAGCACAGGGCATTCTCCCAGCACAATGACCACCCATGATAACCCTGAAATCTTTAGGGAAACTGCAGAAGAAGTTGCGAGCTCCACTGGGAAAACCAGGAAGAGGAAGCTTTTGGATGGTTATAATGATGACATAAAACTCATGGATACCGCCACTTCTCTGAATATGAACAAATCCTCTACGATGGGAGATGATGCAGAATCAAGATGTTCTAGTAACAACAATGAGGAATCCTTTTCTGGCAATAAGAAGATGAAAAGGGAGAAGATACGGAACGTTCTGAGTGCTCTGCATCGCATAATTCCTGGCAGGAAGGATAAGGACCCAGTTATGCTCCTTGATGATGCCATACGTTGCTTGAAATCCTTGAAATACAAGGCTAAAGCACTCGGACTTGATGCCCCGTAA 1095 0.4201 MGKDCGTWIPHLQFGWQSPNLNPLDVGKQNGISAAMNPGVNMISINETMPAFASSALPYLQLGNSNEPRGWFYGLPRFRQGFTPATNFTAEGKTPDDHIKGFREKIARYGGSSTPQKRFLVIDQTGGQTTIVYSSRFGSPGECIASWHSNLHGANYMSRNGPSFRTDLNLNQNPNQNQNHMIESTLTDKVNENQGTGIESEMHEDTEEINALLYSDSDDYSSEDDDEVTSTGHSPSTMTTHDNPEIFRETAEEVASSTGKTRKRKLLDGYNDDIKLMDTATSLNMNKSSTMGDDAESRCSSNNNEESFSGNKKMKREKIRNVLSALHRIIPGRKDKDPVMLLDDAIRCLKSLKYKAKALGLDAP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1022 364 MobiDBLite consensus disorder prediction 285 313 - -
Apr5g1022 364 MobiDBLite consensus disorder prediction 217 246 - -
Apr5g1022 364 MobiDBLite consensus disorder prediction 285 308 - -
Apr5g1022 364 PANTHER TRANSCRIPTION FACTOR BHLH145 1 362 - -
Apr5g1022 364 PANTHER TRANSCRIPTION FACTOR BHLH145 1 362 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1022 Apr-Chr5 14821730 14826012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1022 70 357 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 29.293 2.33e-23 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1022 - - gmx:102668102 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1022 5 14821730 14826012 Apr5g1022 5 14821730 14826012 ECH
Apr9g0986 9 18901555 18905436 Apr5g1022 5 14821730 14826012 PCT