Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Apr5g1014 | ATGGAAACAAACAGAGCCGAAGCCGAACGCTTGCTCGGAATCGGCGAAAAACTATTGCAGAGCCGTGATCTCTACAGTTCAAGGGACTTTGCCATTCTAGCGCAGGAAACGGAACCGCTTCAAGAAGGTTCAGACCAGATCATCGCCATCGTCGATGTCCTTGTCGCTGCGGAGAAACCCATCAGCAACAACCACCTCGATTGGTACGCTATTCTCCAACTCGATCGCGGTTGTCAAGACCTTGACCTCATCAGAAAAAACTATCGTAGACTCGCCATTCTCCTTCACCCCGACAAGAACCCTTTCTCCCTTGCTGACCAAGCTTTCAAGCTTGTTGCCGATGCATGGGCTGTTTTATCAGACCCTGTCCAAAAGCCCATTTATGATAACGACATCTGCCGGTTTGACCTCTCCGGTTCAGTTCACCACGGTAAGTTACCGGTTCGAAGGGGGAACCCCGGTTTGGACGAATCAGTGAGTTTCTGGACTGCATGTCCCTACTGTTATCGTTTGTACGAGTACCCTAGGGTTTACCAGGGTTGTTGTTTGAGGTGCCAGAATTGCGAAAGATCCTTCCATGGCCTTTCCATTCCGTCTCTGCCTCCACTCGTGCCGGGTCAAGAGGCTTATTATTGTCACTGGGGATTCTTTCCCATGGGCTTCGTGTTTCCAACTTTGGGTTCTGAGGGGCCTGAGTCTTCCGAGGTTCATAATTGGATCCTGCCGCCCGTGGTGAATGCTCCCAATGTAGGGAAACCAGCTGTGGCTGTTGCAAATGGGGGATTGGGATCTGCTCCGCGGAAGCGAGGGAGGCCACGAAAGGTGGTTTGA | 831 | 0.5174 | METNRAEAERLLGIGEKLLQSRDLYSSRDFAILAQETEPLQEGSDQIIAIVDVLVAAEKPISNNHLDWYAILQLDRGCQDLDLIRKNYRRLAILLHPDKNPFSLADQAFKLVADAWAVLSDPVQKPIYDNDICRFDLSGSVHHGKLPVRRGNPGLDESVSFWTACPYCYRLYEYPRVYQGCCLRCQNCERSFHGLSIPSLPPLVPGQEAYYCHWGFFPMGFVFPTLGSEGPESSEVHNWILPPVVNAPNVGKPAVAVANGGLGSAPRKRGRPRKVV* | 277 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Apr5g1014 | 276 | Gene3D | DnaJ domain | 55 | 137 | IPR036869 | - | |
| Apr5g1014 | 276 | ProSiteProfiles | dnaJ domain profile. | 67 | 132 | IPR001623 | - | |
| Apr5g1014 | 276 | PANTHER | CHAPERONE DNAJ-DOMAIN PROTEIN | 1 | 239 | - | - | |
| Apr5g1014 | 276 | CDD | DnaJ | 67 | 121 | IPR001623 | - | |
| Apr5g1014 | 276 | SMART | dnaj_3 | 66 | 124 | IPR001623 | - | |
| Apr5g1014 | 276 | PRINTS | DnaJ domain signature | 69 | 87 | IPR001623 | - | |
| Apr5g1014 | 276 | PRINTS | DnaJ domain signature | 88 | 103 | IPR001623 | - | |
| Apr5g1014 | 276 | PRINTS | DnaJ domain signature | 104 | 124 | IPR001623 | - | |
| Apr5g1014 | 276 | Pfam | DnaJ domain | 67 | 129 | IPR001623 | - | |
| Apr5g1014 | 276 | PANTHER | CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN | 1 | 239 | - | - | |
| Apr5g1014 | 276 | SUPERFAMILY | Chaperone J-domain | 62 | 130 | IPR036869 | - | |
| Apr5g1014 | 276 | ProSitePatterns | Nt-dnaJ domain signature. | 109 | 128 | IPR018253 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Apr5g1014 | Apr-Chr5 | 14744203 | 14745360 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Apr5g1014 | 4 | 273 | SUVH1 or 3-interacting DNAJ domain-containing protein superfamily | AT2G01710 | 48.675 | 1.20e-90 | 271 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Apr5g1014 | - | - | gmx:100802055 | 374.785 |
Event-related genes