LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g1005	ATGTTTCAATCACCAATGCCAGAAAAGAAGAACAAAAAGGTCTCTTTCACGGAGGAAGATGCTGCTACACTCATTCAGAGGTATGACGCAACGACGGTGCTAGCGTTGCTTCAAGAAGTGGCGGCACATTGCCCTAACTCCAAAATTGATTGGAATGAGTTGGTGAAGAAAACCTCGACGGGTATATCTAATGCTAGGGAGTACCAAATGCTGTGGCGTCACTTAGCTTATCGTGAAGCCTTGCCTGAAAATTTCGACGACGGGGTTGAACCTCTGGATGATGATAGTGACCTAGAGTGTGAGCTAGAAGCATTACCCCTAGTAAGTGTGGAATCTTCAGCGGAGGCTACAGCATGTGTGAAGGTAATGATTGCTTCTTGTACTCTAAGTGAATCTACCCCAAGTAGCTCAACAATAGAGGCTCCGTTGACTATAAATGTTCCAGTTTGCCATTCATCTAGAACTCCCATTGAAAGTTCTCAGCCCTCTAATTTGATGCAAGGGTCAAGCATTATTTTTCCAGTTACTGTTCAGAGACAGACACTGCCAACTGTATCATCATCAGATGGTATAGAATCTAAGGGATTAGTTGGTGGTAACATGGCTTCCAAAAGAAAAAGAAAAGCATGGTCAGAGGAAGAGGACATGCAGCTACGAGCTGCAGTTCAGAGATGCGGTGAAGGGAATTGGGCAACAATGGCAAAACTAGACAACTTTCCTATCAAGAGAAGTCCTACACAGTTGGCTCAGAGGTGGAGCATTTTACGAAAGAAAGATGGCTGCACCAATCCAGGAACCATCTCAACCAGCACACAGTATACTACTGCTGAACAGCTAGCAACTCGACACTCTTTATCTTTAGCCCTTGATATGCCATTCAAAAAGTTAACTGCTCCTGGAGTGACTGATCCTGCTAAGACATCCACATTAGTTAAAAATCAAGTGCAGATTAGAAATACTACAGAGACAGTTGCCACTAGTTCTGTACCACCTCAAGCTTTGTTGAGATCTTCTGAATCCTCTGCAAAATCCAAATTAGTTGAAAAACCAGTCTTGAAGTGCAATCCAATTTCAGAACCTGCGGTGAAATCTATTACAGCTGGGACACAAATTGAGTCCCGTCCAAACACTATGTCACAATTGACGGTTGCTCAAGTAAGAAACACTGAAGATACTAAGCCTGCAGCTAGCTCTTCGACAAAGTCATCCATTTCTGTCATTTTGCCTTCTGACCCGAAGGACAAACCTGTTACCTCTGTGGCTGATGAAATTCCATTGAAGCAAGATGTTAATCCCGCCGAAGAATTCCGAGTTTCTGATCCTAGCTCCACACCAAAAGAGAAGGTACAACAAAATGGGGCTCCTAAATGTATTACTGAAAGCCAGGTTGATAGCACCTTGGAGGAGGAAAGATTGAATTTAGGTCAAGAGAAGAGTGTGCCTCTTGTTAAAATTACAAGCAATGATGAAGCTTTAAAAGATAAAGGAATTCCAGGAGCGTGTGAAGAGCAAGGAAATGTTAAGAATTCAAAGGCGACTGAGAATAGCAACCAACACAAGGAGAGTCAAGATTTAAATGAAGATAAGAGGATGAATTCACTTAACGAAAGCTCGAATGATCAAAACACGAATGGTAAACATGTAAATTTGCCAGCACAAGATGTTTGCAGCAAAAGTCTGGATATGCCGAGGTAG	1695	0.426	MFQSPMPEKKNKKVSFTEEDAATLIQRYDATTVLALLQEVAAHCPNSKIDWNELVKKTSTGISNAREYQMLWRHLAYREALPENFDDGVEPLDDDSDLECELEALPLVSVESSAEATACVKVMIASCTLSESTPSSSTIEAPLTINVPVCHSSRTPIESSQPSNLMQGSSIIFPVTVQRQTLPTVSSSDGIESKGLVGGNMASKRKRKAWSEEEDMQLRAAVQRCGEGNWATMAKLDNFPIKRSPTQLAQRWSILRKKDGCTNPGTISTSTQYTTAEQLATRHSLSLALDMPFKKLTAPGVTDPAKTSTLVKNQVQIRNTTETVATSSVPPQALLRSSESSAKSKLVEKPVLKCNPISEPAVKSITAGTQIESRPNTMSQLTVAQVRNTEDTKPAASSSTKSSISVILPSDPKDKPVTSVADEIPLKQDVNPAEEFRVSDPSSTPKEKVQQNGAPKCITESQVDSTLEEERLNLGQEKSVPLVKITSNDEALKDKGIPGACEEQGNVKNSKATENSNQHKESQDLNEDKRMNSLNESSNDQNTNGKHVNLPAQDVCSKSLDMPR*	565

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g1005	564	MobiDBLite	consensus disorder prediction	322	341	-	-
	Apr5g1005	564	CDD	SANT_TRF	208	257	-	-
	Apr5g1005	564	ProSiteProfiles	Myb-type HTH DNA-binding domain profile.	202	260	IPR017930	-
	Apr5g1005	564	MobiDBLite	consensus disorder prediction	443	462	-	-
	Apr5g1005	564	Gene3D	-	200	261	-	-
	Apr5g1005	564	Pfam	Myb-like DNA-binding domain	207	252	IPR001005	-
	Apr5g1005	564	ProSiteProfiles	Myb-like domain profile.	202	256	IPR001005	-
	Apr5g1005	564	SUPERFAMILY	Homeodomain-like	205	258	IPR009057	-
	Apr5g1005	564	MobiDBLite	consensus disorder prediction	535	550	-	-
	Apr5g1005	564	MobiDBLite	consensus disorder prediction	322	347	-	-
	Apr5g1005	564	MobiDBLite	consensus disorder prediction	388	564	-	-
	Apr5g1005	564	PANTHER	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	413	561	-	-
	Apr5g1005	564	PANTHER	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	6	413	-	-
	Apr5g1005	564	SMART	sant	206	258	IPR001005	-
	Apr5g1005	564	MobiDBLite	consensus disorder prediction	514	534	-	-
	Apr5g1005	564	MobiDBLite	consensus disorder prediction	388	407	-	-
	Apr5g1005	564	PANTHER	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	6	413	-	-
	Apr5g1005	564	PANTHER	HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN	413	561	-	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Apr5g1005		Myb_DNA-binding	1.7e-08	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g1005	-		-	gmx:100805773	743.806

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr5g1005	5	14664635	14671261	Apr5g1005	5	14664635	14671261	ECH