Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0999 ATGCCTCACAGAACCACTTACTTTTTCCCGCGCCAGTTTCCTGAGCGAGGTTTGGATGAATCTTCCAAACAGCTATTAGATCACGAGAAAAAGAAAATCGTCAACTCAATCAAATCTGAAACCTATGCCGTTGAAAGCGACACTCATAAAAAGTCACTTTCACCGAGCAAGGACGACGTCGTTCTCTCATCGGGGAAACACTCCGCCGTTTCCGACCTCTTCGCCGCCGGCGACAAGTTCCGAACCAAGCACAAGCCGATTGCGGCTTTCTGCGACTGGTTGATCGACAAGAAAGCCAACCACTCCGGCCACCATCACCACCACCACCACCACCACCACCACCATCATCAACTCAAGCCTTACGTTGAGGAAGACCATGACCTCCTTCTTCCACCGCCGGCGCCGGAGACCGCCGTGAAGGACGCCGCCCTCGACCAAAGCTTCGACCGGCAGGTTTCGCTTCCGCGGCTCTCGAGCGGGAGTAGCTATGCTGGAAGCTTGTTTTCGGGGACGACGTTGGATTGCAACTTTTCGAGCGACATTAAGGAGGAAACGTCGTCGTCTCGCATCTCCACCAAAACGATCACAACTATCCCTGCTCCGAGGCAGAAGGAGGATGAAGAAGAGGAACAAAGCAAAGAGAAGTTGGCGAAGAAGTCCAAAGAAAGTTACATCTTGCAGCTCACGTTAGCGAAGAGACTCACTTGCTTGGCCAGCCTCGTAACCGAACCTGTTCTCACCCCAGGAACCGAAACATGGGATGCTGAATCTGTTTCTTATCGTCTTTGGGTGAGTGGGTGTTTGTCGTACACAGATAAGATATCTGATGGGTTTTATAACATATTGGGGATGAATCCGTATCTGTGGGTGATGTGCAATGATGTGGAAGAAGGTAGAAGGATACCGACTTTGATGGCGCTTAAAGCTGTTGAACCAAGCGAGACTTCTATGGAGGTGGTGCTTATTGATAGACACGAGGACTCTCGACTCAAGCTGCTTCAAGATAAAGCGCAAGAGTTGTATTGTGCTTCCGAGAACACTTTGGTGTTGGTGGAACAGCTAGGAAAACTAGTTGCCATTTATATGGGGGGTACGTTCCCAGTGGAGCAAGGAGATCTTCACAAGCGCTGGAAATTGGTGAGTAAGAAGTTGAGGAATTTTCACAAGTGTGTTGTGCTTCCTATTGGTAGCCTATCTACCGGGCTTTGTAGGCACCGGGCAATTCTCTTCAAGAGATTGGCAGATTATATAGGTTTGCCTTGTCGCATAGCTCGTGGTTGCAAGTATTGTGTTGCAGATCATAGATCCTCCTGCCTAGTCAAGATTAAAGATGACAAGCAGCTCTCAAGGGAATATGTGGTCGACCTAGTTGGGGATCCAGGAAATGTCCACGGGCCAGATTCCTCAATTAATGGAGCATATGTTTCTTCAATGCCTTCTCCATTTCAAATTTCTCATTTGAAAGAATCACAATCACCTTATATGGATGATGCAGCAAGTTCTCAATCTCTAAGTTTCAATCACGGATCTGTTAATCCTGAAAGTCTTCCATATTCAGGCTGTGGACAGAATGATCAACAAGTTAAGGAATCCGATTTACTGATAAATCAGAAGGGTTCAGTTTACGCTTCAGTTGATCAAATCTTTGAAGGAACAGAACCTTCTCTAATTTCTTTTGGTTTAAAAAGGAATGAGGAGGAGTGTGAAGTTCTAAGTTCAGTTTTGCCTACCATCCATGAAGATGTTTCTAAAGGTCTTCATACTGCCATTGAAGAAGCATCATTACATGAATATCAGAGGCTTAGTGAAGATTCAATTATAGTACAAGAAACTTCCAACAGTGACATCATTGTAACTGGAAGTTCTGTTGTAAAAAGTGCTTTCAAGCAATCTGTACTTACTTCATCCAGCCAGTCCGAACTGAAAGACAATAGAATAGAAAACCAGGGTTGTTTACCTGCTGGGAATATTCCAAGATATGTAAATCTTGAACCATCACTTGCAATGGACTGGCTTGAGATTTCATGGGATGATTTACGAATTAAAGAGCGAGTTGGTGCTGGCTCATTTGGGACGGTGCACCGTGCTGAATGGCATGGATCAGATGTTGCAGTCAAGGTTTTAACAGTTCAAGATTTCCATGATGATCAGTTGAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGTGTTCGTCATCCAAATGTGGTGCTCTTCATGGGTGCAGTTACAAAACGCCCCCATCTATCTATAGTGACAGAGTATTTGCCTAGGGGTAGTTTATACCGCCTGATACACAGGCCAGCATCTGGTGAAATTCTGGATAATAGGAGAAGATTACGGATGGCTTTGGATGTGGCTAAAGGGATCAATTATCTCCACTGTTTGAAACCTCCAATTGTGCACTGGGATCTCAAATCCCCAAACTTGTTGGTGGATAAAAATTGGACTGTGAAGGTTTGTGATTTTGGACTGTCCAGATTTAAGGCAAACACTTTCATACCATCAAAATCTGTTGCCGGAACACCTGAGTGGATGGCTCCTGAATTTCTTCGTGGGGAACCTTCCAATGAGAAATCTGATGTATACAGTTTTGGAGTTATCCTGTGGGAACTTGTGACCATGGAACAACCATGGAGTGGACTTAGCCCTGCTCAGGTGGTTGGAGCTGTTGCTTTCCAGAATAGGAGGCTTACTATCCCTCCAAACATTTCCCCAGCATTGGCCTCTCTCATGGAATCTTGTTGGGCTGATGACCCTAGTGAACGCCCATCTTTCGCTGGCATAGTTGAGTCACTAAAGAAGTTGCTGAAGTCTCCAGCAGAGGTGATAAAAATGGGAGATACATAA 2850 0.454 MPHRTTYFFPRQFPERGLDESSKQLLDHEKKKIVNSIKSETYAVESDTHKKSLSPSKDDVVLSSGKHSAVSDLFAAGDKFRTKHKPIAAFCDWLIDKKANHSGHHHHHHHHHHHHHQLKPYVEEDHDLLLPPPAPETAVKDAALDQSFDRQVSLPRLSSGSSYAGSLFSGTTLDCNFSSDIKEETSSSRISTKTITTIPAPRQKEDEEEEQSKEKLAKKSKESYILQLTLAKRLTCLASLVTEPVLTPGTETWDAESVSYRLWVSGCLSYTDKISDGFYNILGMNPYLWVMCNDVEEGRRIPTLMALKAVEPSETSMEVVLIDRHEDSRLKLLQDKAQELYCASENTLVLVEQLGKLVAIYMGGTFPVEQGDLHKRWKLVSKKLRNFHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCVADHRSSCLVKIKDDKQLSREYVVDLVGDPGNVHGPDSSINGAYVSSMPSPFQISHLKESQSPYMDDAASSQSLSFNHGSVNPESLPYSGCGQNDQQVKESDLLINQKGSVYASVDQIFEGTEPSLISFGLKRNEEECEVLSSVLPTIHEDVSKGLHTAIEEASLHEYQRLSEDSIIVQETSNSDIIVTGSSVVKSAFKQSVLTSSSQSELKDNRIENQGCLPAGNIPRYVNLEPSLAMDWLEISWDDLRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPASGEILDNRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFIPSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMEQPWSGLSPAQVVGAVAFQNRRLTIPPNISPALASLMESCWADDPSERPSFAGIVESLKKLLKSPAEVIKMGDT* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0999 949 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 121 947 - -
Apr5g0999 949 SUPERFAMILY Protein kinase-like (PK-like) 656 932 IPR011009 -
Apr5g0999 949 CDD STKc_MAP3K-like 685 933 - -
Apr5g0999 949 Pfam Ethylene-responsive protein kinase Le-CTR1 255 463 - -
Apr5g0999 949 Gene3D Phosphorylase Kinase; domain 1 672 756 - -
Apr5g0999 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Apr5g0999 949 MobiDBLite consensus disorder prediction 101 117 - -
Apr5g0999 949 MobiDBLite consensus disorder prediction 101 120 - -
Apr5g0999 949 Coils Coil 202 222 - -
Apr5g0999 949 ProSitePatterns Protein kinases ATP-binding region signature. 685 706 IPR017441 GO:0005524
Apr5g0999 949 PRINTS Tyrosine kinase catalytic domain signature 753 766 IPR001245 GO:0004672|GO:0006468
Apr5g0999 949 PRINTS Tyrosine kinase catalytic domain signature 794 812 IPR001245 GO:0004672|GO:0006468
Apr5g0999 949 PRINTS Tyrosine kinase catalytic domain signature 860 882 IPR001245 GO:0004672|GO:0006468
Apr5g0999 949 PRINTS Tyrosine kinase catalytic domain signature 904 926 IPR001245 GO:0004672|GO:0006468
Apr5g0999 949 ProSiteProfiles Protein kinase domain profile. 679 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0999 949 SMART serkin_6 679 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0999 949 Gene3D Transferase(Phosphotransferase) domain 1 758 945 - -
Apr5g0999 949 Pfam Protein tyrosine and serine/threonine kinase 679 933 IPR001245 GO:0004672|GO:0006468
Apr5g0999 949 PANTHER SERINE/THREONINE-PROTEIN KINASE CTR1-LIKE ISOFORM X1 121 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0999 Apr-Chr5 14619189 14627790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0999 1 947 MAP Kinase Kinase Kinase AT4G24480 57.669 0.0 1088
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr5g0999 PK_Tyr_Ser-Thr 1.5e-65 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0999 5 14619189 14627790 Apr5g0999 5 14619189 14627790 ECH
Apr9g1011 9 19271455 19279928 Apr5g0999 5 14619189 14627790 PCT
Apr9g1703 9 26243242 26249350 Apr5g0999 5 14619189 14627790 PCT