Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0989 ATGAGGAAAAAAAGGAAAGGAACTGAGGCTGATGCATCCGCGGATTTGCCTGTTATTTTGCCTTCGAATCATGGCTCTGCTTCGTCCAATTTGAAATCCCATTACTCTCTGGAAGATTGTTCTCGGTTGAAGAAGAGGTGTAAAGAAGATGCTGACACTGAGCCAGCTGCTTCCTATAAAAGTAGGCTTGCTGGAATTGCTACTGCTCCGCCTTGTGGGACGTCATCTTTGATCACGCCGGGAAGAGGTCTCAAGAGAAAGATAGGTTGCATTGATGTCGCTACCCAGATGGGCAGGAAGAAAAAGATTGAGGATGATTATGTATCTGGTGAAACGATTGGGCAAGGCAAGTTTGGATCTGTTTGGTTGTGTCGGTCCAGGGTTAGTGGAGCAGAATATGCATGTAAGACTCTGAGGAAGGGGGAAGAGACGGTTCATCGAGAGGTTGAGATAATGCAACACTTGTCTGGACATTCTGGGGTTGTGACTCTGCAAGCAGTTTATGAAGAAGCTGAATGCTTTCATCTTGTGATGGAGTTGTGCTCTGGGGGACGACTCATTGATCGAATGTTTAAGGATGGTCCATATTCAGAACAGCGGGCTGCTAATATACTCAAAGAAGTGATGTTAGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCCGAAAATATTCTGCTTACTGCTTCTGGAAAAATAAAGCTTGCAGATTTTGGCTTGGCTATGAGAATTTCAGAAGGTCAGAACTTGACTGGTTTGGCTGGAAGCCCTGCCTATGTTGCCCCAGAAGTATTGTTAGGCAGATACTCTGAGAAGGTTGATATATGGAGTGCTGGAGTGCTCCTTCATGCGCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTAGAAGCTGTTTTTGAGGCTATTAAGACTGTCAAATTAAATTTCCAAACTGGGATGTGGGAATCAATATCTAAACCTGCACGAGACCTTATTGGGAGAATGTTGACAAGGGATATTTCAGCAAGGATATCAGCTGACGAAGCACTTAGGCATCCATGGATATTGTTCTACACAGCGCATTCATTGACCATGTTGCCCATCAAAACAAAATTGAAGAACCAAATTGGTGCAGCATGCCAACAACTTGTTGCTGCACCTGAACAAAGGTTGGGAGGAAACATGATAGGTAATTGCTCACTTAGCGAGGTTTCATCCTCTGAAAGTTGCAATTCAGATGATCAAGATGATTGTGTGTTGATTGATGCACTTGCCACTGCAATTTCACATGTGAGGATATCCGAACCAAAGAGGAGCAGGTTGTGTGGTCCCGCAGGTCCTATAGTTCAGCAAGGTTCATCTAACATGAAGGCTAACAACCTCTGTAAAGCATTTTGA 1398 0.4399 MRKKRKGTEADASADLPVILPSNHGSASSNLKSHYSLEDCSRLKKRCKEDADTEPAASYKSRLAGIATAPPCGTSSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSRVSGAEYACKTLRKGEETVHREVEIMQHLSGHSGVVTLQAVYEEAECFHLVMELCSGGRLIDRMFKDGPYSEQRAANILKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLNFQTGMWESISKPARDLIGRMLTRDISARISADEALRHPWILFYTAHSLTMLPIKTKLKNQIGAACQQLVAAPEQRLGGNMIGNCSLSEVSSSESCNSDDQDDCVLIDALATAISHVRISEPKRSRLCGPAGPIVQQGSSNMKANNLCKAF* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0989 465 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 457 - -
Apr5g0989 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Apr5g0989 465 MobiDBLite consensus disorder prediction 1 30 - -
Apr5g0989 465 Gene3D Transferase(Phosphotransferase) domain 1 98 401 - -
Apr5g0989 465 CDD STKc_CAMK 106 354 - -
Apr5g0989 465 ProSiteProfiles Protein kinase domain profile. 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0989 465 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Apr5g0989 465 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 24 457 - -
Apr5g0989 465 SUPERFAMILY Protein kinase-like (PK-like) 104 370 IPR011009 -
Apr5g0989 465 Pfam Protein kinase domain 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0989 465 SMART serkin_6 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0989 Apr-Chr5 14457785 14461425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0989 99 355 EF-hand Containing Proteins AT4G35310 43.820 2.71e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr5g0989 Pkinase 1.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0989 - - gmx:100812729 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0989 5 14457785 14461425 Apr5g0989 5 14457785 14461425 ECH
Apr9g0975 9 18740035 18743665 Apr5g0989 5 14457785 14461425 PCT