Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0988 ATGGAAGGAGAATCGCTCACGTTACTAGGGTTCTGGGCTAGTCCATTTGCCCTCAGGGTTAAGTGGGCTCTTGAACTGAAAGGGATTCAGTACCAATATGTGGAAGAAGATCTCATCAACAAGAGTGCCATGCTACTGCAGTATAACCCTGTCTACAAGAAAATACCGGTTCTTGTTCATGACGGCAAGCCCCTGGCAGAATCACTAGTGATTCTTGAATATATTGACGAGACCTGGAAGCAAAATCCTCTTCTTCCACATGAACCTTATGAAAGGGCCAAAGCACGATTCTGGTCCACTTTCGTTGATGAAAAGTGTGTGCCAGCTTTTATGGCCACCTTTTCCAAAGGAGGGGAGGAACAACAGAAGGCAGCACCAGAAGCTCGAGAGAATCTAAAGACCCTTGAAGGTGGACTCGAAGGAAAACGCTACTTTGGAGGTGAAAAAATAGGCTTTGCTGATATTGCTATCGGCTGGCTTGGAATCTGGGTTCGAATAGTGGAGGAAATTGTGGGCATAAACCTAATTGATAAAGAGTCAAAGCTTAATGCTTGGTTCGACGATTTTCTTGACTATCCTGGTATCAAAGAATGTGTGCCGCCCCGTGATAAACTACTAAACCACAACAAGGCCTTCCACGAAGCCTTGACATCTTCCTCCACCTGA 666 0.455 MEGESLTLLGFWASPFALRVKWALELKGIQYQYVEEDLINKSAMLLQYNPVYKKIPVLVHDGKPLAESLVILEYIDETWKQNPLLPHEPYERAKARFWSTFVDEKCVPAFMATFSKGGEEQQKAAPEARENLKTLEGGLEGKRYFGGEKIGFADIAIGWLGIWVRIVEEIVGINLIDKESKLNAWFDDFLDYPGIKECVPPRDKLLNHNKAFHEALTSSST* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0988 221 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 218 IPR045073 -
Apr5g0988 221 Gene3D Glutaredoxin 1 84 - -
Apr5g0988 221 PANTHER - 4 218 - -
Apr5g0988 221 SFLD Main (cytGST) 2 219 - -
Apr5g0988 221 Gene3D - 85 220 - -
Apr5g0988 221 CDD GST_N_Tau 6 79 - -
Apr5g0988 221 Pfam Glutathione S-transferase, C-terminal domain 104 190 IPR004046 -
Apr5g0988 221 SUPERFAMILY GST C-terminal domain-like 77 214 IPR036282 -
Apr5g0988 221 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Apr5g0988 221 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Apr5g0988 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Apr5g0988 221 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Apr5g0988 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 212 IPR010987 -
Apr5g0988 221 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0988 Apr-Chr5 14453286 14454264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0988 3 220 Glutathione S-transferase Gene Family AT2G29420 47.273 4.35e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0988 K00799 - gmx:100813267 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0988 5 14453286 14454264 Apr5g0988 5 14453286 14454264 ECH