Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0948 ATGGAGTGTTATTTGTCTTTCACTCTTGTTCTTCTATTATGTCTTTACAACATCTCTCTCGCTAAGGCTCTCAACAGGGGCTTCAGTGTTGAACTCATCCACCCTGACTCTCCAAAATCACCATTCTACGATCCCAAAGAAAATGAATACCAAAGAGTTGCCAATGCTTTGCATCGTTCCATCACTCATGCCGACGCAAAAATAGGTGCTGTAGCCAATTTAACAATGCTTAGAGGTGAATACCTCATGAGATATTCATTTGGAACCCCACCGTTCCAACTCTATGGTGTTATAGACACAGCAACTGACATTGTTTGGACGCAATGCAAACCTTGTAAAACGTGTCATTACCAAAGAGCTCCAATGTTCGATCCTTCAAAATCCACAACATACCAAACCATTCCATGCACTTTCGCAACATGCAGGTCTGTGGCATATACAAAATGCAATGAAGAACATTTTTGTGAATATCGTAGGAGGTATGTGGGTGCATATTCACAAGGGTATCTTAGTTCGGAGACTCTCACTTTGGAGTCCACCAATGGAAATCCTATCAAATTTCCTAAATTTGTGATGGGATGTGGACACAACAACACTGCGGGCTTTTATGGGCCAAACACAGGCTTAATAGGCCTTAGTGGTGGGCCTGTGTCCCTCATATCTCAAATAAGTTCTTCAGTAGATGGCAAATTCTCTTATTGTTTGGTGCCAAGGCCTTCCAACATCTCAAGCAAACTTCATTTTGGAGATGATGCTGTGGTTTCTGGTGAAGGGACTGTTTCTACTCCCATAGTCATAAAGGATTCAAAGGGCCTTTATTTTACAACTTTGAAAGGATTCAGTGTGGGAGACAAAAGAATTGAGTTTGGAAACCCCACCTTTGGATCCAATGATGACAAGGGAAACATGTATATTAACACAGCTGTAATCACCACTCTTTTGCCAGATTATATTTACTCAAAATTAGAATCAGCTGTGGCAAATGTGGTTAAATTGGAGCGTGCTCAAGATCCAAATAAAGTACTCAGCCTTTGCTACAAAGGTACCTTTCAACAATTACAGGCTCCTAAAATCACTGCACATTTTAAGGATTCTGCAAATGTTCAGTTGAATACGCACAACACCTTTGTTCAAGTTGCTGAAAATGTTATATGCTTGGCTTTTCAATCAACTGAATATGTTGGAGTCTTAGGAAATCTGGCCCAACGAAATATTTTAGTTGGCTATGATGTCCAAAAGAAAACCATTTCCTTTAAACCTACAGATTGCACCAAGTTATAA 1281 0.4005 MECYLSFTLVLLLCLYNISLAKALNRGFSVELIHPDSPKSPFYDPKENEYQRVANALHRSITHADAKIGAVANLTMLRGEYLMRYSFGTPPFQLYGVIDTATDIVWTQCKPCKTCHYQRAPMFDPSKSTTYQTIPCTFATCRSVAYTKCNEEHFCEYRRRYVGAYSQGYLSSETLTLESTNGNPIKFPKFVMGCGHNNTAGFYGPNTGLIGLSGGPVSLISQISSSVDGKFSYCLVPRPSNISSKLHFGDDAVVSGEGTVSTPIVIKDSKGLYFTTLKGFSVGDKRIEFGNPTFGSNDDKGNMYINTAVITTLLPDYIYSKLESAVANVVKLERAQDPNKVLSLCYKGTFQQLQAPKITAHFKDSANVQLNTHNTFVQVAENVICLAFQSTEYVGVLGNLAQRNILVGYDVQKKTISFKPTDCTKL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0948 426 SUPERFAMILY Acid proteases 76 424 IPR021109 -
Apr5g0948 426 Gene3D Acid Proteases 61 250 IPR021109 -
Apr5g0948 426 ProSiteProfiles Peptidase family A1 domain profile. 81 419 IPR033121 -
Apr5g0948 426 PANTHER ASPARTIC PROTEINASE CDR1-RELATED 6 424 - -
Apr5g0948 426 Gene3D Acid Proteases 255 426 IPR021109 -
Apr5g0948 426 Pfam Xylanase inhibitor C-terminal 273 419 IPR032799 -
Apr5g0948 426 Pfam Xylanase inhibitor N-terminal 81 250 IPR032861 -
Apr5g0948 426 CDD pepsin_A_like_plant 80 423 IPR034161 -
Apr5g0948 426 PANTHER OS07G0603500 PROTEIN-RELATED 6 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0948 Apr-Chr5 13985868 13987148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0948 79 426 Miscellaneous Gene Families AT1G44130 24.074 1.07e-18 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0948 - - gmx:100790081 449.129