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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Apr5g0936
ATGGCCAGGGGATTGAAGAAGCATTTGAAGAGGCTCAATGCCCCAAAGCATTGGATGCTTGACAAATTGGGTGGTGCATTTGCGCCAAAGCCCTCATCTGGACCACACAAATCTAGGGAGTGCCTCCCACTCATACTCATTCTGCGAAACCGGCTGAAGTATGCCCTGACATACCGTGAAGTCATTGCTATTCTGATGCAGCGACATGTCCTTGTTGATGGCAAAGTTAGGACTGACAAGACTTATCCTACTGGTTTCATGGATGTTGTATCAATCCCTAAAACAAATGAGAACTTCCGCCTGCTTTATGACACTAAAGGCCGATTCCGTCTCCACTCAGTGAGGGATGACGAGGCAAAGTTCAAGCTCTGCAAGGTTCGATCAGTGCAGTTTGGGCAAAAAGGTATCCCCTACCTGAACACCTATGATGGTCGCACAATCCGCTACCCAGACCCCCTCATCAGGACCAACGACACCATTAAGCTGGATCTAGAGGAAAACAAGATCGTTGATTTCATCAAGTTCGATGTTGGGAATGTAGTTATGGTGACAGGTGGAAGGAACAGGGGGCGTGTTGGAGTGATCAAGAACAGGGAGAAGCACAAGGGAAGCTTTGAGACAATCCATGTTCAGGATGCTACTGGACATGAATTTGCAACTCGTATGGGCAATGTGTTCACTATTGGCAAGGGTTCAAAACCATGGGTATCACTTCCCAAGGGTAAAGGTATTAAGTTATCAATCATTGAGGAAGCTAGGAAAAGGATTGCCGCCCAACAAGCAGCTACCGCTTAA
795
0.4717
MARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTYPTGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDDEAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIRTNDTIKLDLEENKIVDFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHVQDATGHEFATRMGNVFTIGKGSKPWVSLPKGKGIKLSIIEEARKRIAAQQAATA*
265
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Apr5g0936
264
Hamap
30S ribosomal protein S4e [rps4e].
7
238
IPR000876
GO:0003735|GO:0005840|GO:0006412
Apr5g0936
264
CDD
KOW_RPS4
175
229
IPR041982
-
Apr5g0936
264
Pfam
RS4NT (NUC023) domain
3
39
IPR013843
-
Apr5g0936
264
ProSiteProfiles
S4 RNA-binding domain profile.
42
104
-
-
Apr5g0936
264
SMART
s4_6
42
106
IPR002942
GO:0003723
Apr5g0936
264
SMART
kow_9
174
201
IPR005824
-
Apr5g0936
264
Pfam
40S ribosomal protein S4 C-terminus
212
258
IPR032277
-
Apr5g0936
264
Pfam
S4 domain
47
90
IPR002942
GO:0003723
Apr5g0936
264
PANTHER
40S RIBOSOMAL PROTEIN S4
2
220
-
-
Apr5g0936
264
PANTHER
40S RIBOSOMAL PROTEIN S4
221
264
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Apr5g0936
Apr-Chr5
13803718
13805760
Dispersed/Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Apr5g0936
1
262
Cytoplasmic Ribosomal Protein Gene Family
AT5G58420
91.603
0.0
512
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Apr5g0936
K02987
-
gmx:100811336
503.827
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