Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0928 ATGGCATTGGAATTGATTGGTAGCGCTCTTCTTTCTGCTTTCATTCAGGCAGCAGTTGACAAGCTGACTTCTGGTCAAGTTTTGGAGTACTTTGGAAGAAGAAAACTTGATGATGAACTGCTGAACAGGTTGAAGCTCGAGCTGGTGTGCATCAATGCACTGGTTGATGATGCAGAACAAAAGCAGGTCACTGTAGTCAGAGATGCTGCCAAAGTTGCTGTGAAAGCATGGCTTGTTGATGTCAATGAAGCTGTTCTTGATGCAGAGGATCTCCTGGATGAAATAGACTATCAAGTCTCCAAATGTGAATTGGAAGCTGATTCTGAATCTCAATCTCAAACCTGTACTTCCAATGTATGGGCATGTTTCAAGGCTCATTCTGTCAGTTCATTCGATAGGGAAATTGAATCCAGGATGAAAAAAATCCTTGAAAAACTAGAGTATCTTGCAAACCAAAAGGATGATCTAGGTTTGAACGAGGCTAGAAATTCTGGTGTTGGATCAGGTAGTAAAGGGTCAAAAAAATTGCCTTCAACATCTTTGGTGGGTGGAAGTGTTATTTATGGAAGAGATTATGACAAAGAAATTATCCTTAATTGGATGATATCTGACAGTGGGAGTGGTAACCATCCCTCAATACTTTCTGTTGTGGGTATGGGCGGGATAGGTAAGACCGTGCTTGCCCAACATGTATACAATGACTCAAAGGTGGAGGCTAAATTTGAAATCAAAGCTTGGGTCTGTGTTTCAGATGAATTTGATGTTTTTAAGCTATCAAAAGCAATTCTTGAGGCAATCACAAAGTCAACAGATGACAGCAGAGACCTAGAAATGGTTCATGGGAGATTGAAAGAAAATTTGGAAGGGAAGAGATTTCTTGTCATTTTGGATGACGTTTGGAACGAAAAACAAGACCTGTGGGAAGCTTTGCAAACTCCTCTTAATTACGGGGCAAAAGAAAGCAAAATTCTTGTGACGACACGCAGTGAGAAAGTTGCTTTAGCCATGCAGTCAAATGAAGTACATCACCTGAAGCAACTGCAAGAAGATCATTGTTGGAAAGTGCTTGCTAAACATGCAGCCATTGATGAAAATTCTCAATTGGATCCCGAGTTTAAGGAGATAGGTATCAAGTTGGTTGAAAAATGCAAAGGACTGCCTCTAGCCTTGAAAACAATTGGAAGTCTCTTACACACGAAATCGTCGGTTTCGGAATGGGAAAGCATATTGACTAGCGAGATATGGAACTTACCAGAAGAACATAACAATATTATCCCAGCTTTGTTGTTGAGCTATCACCACCTTCCCTCTGCTCTCAAGAGATGCTTTGCTTTTTGTGCTTTGTTCCCAAAAGATTACGAGTTTGACAAGGAGGATCTTATTCTGTTATGGATGGCTGAAAACTTTCTCCAATGCCCCCAACAGAGTAAGAGTATGGAAGAAGTTGGCGCACAGTACTTTGATGATCTGTTATCAAGGTCCTTTTTTCAACAATATCCAAGAAGTTGGGAAGATACAACAATCTCGTATTATGTCATGCACGACCTTCTCAATGACCTGACAAATTATGTAAGCGGGGATTCTTGTATCAGATTAGAAGCGAAAGAAGCACCAACTATATCTGAGAAGACACGTCATTTCTCATTTGTAAGTCACGACATTGAACATTTTCGCAGGTTTAATGGTTTGCATAGACCTAGGTTACGTACATTTCTACCTCTACCAAAGAATACATATTTTCCTTCATGGAATTGTGAGATGTCGATAGATGATTTGTTCTCAAAGTTCAGGTTTCTACGTGTCTTATCGTTTTCGAAAGAACTGAATCTTACAAAGGTGCCTGACTCTATATGCAATCTTAAACATCTTCGTTCTCTAGACCTTTCTCATACCAAAATAACAAAGCTTCCTGATTCAACTTGTTCGCTCTATAACTTACAAATACTGAAGCTGCGTTTTTGTGAATCATTGGAAGAGCTGCCCTTGAATTTGCATAAACTCACTAAATTGCGTCACCTCGATTTAAGAAAAACTAAGTTGAGAAAGATGCCAATGCATTTGGGGGAATTAGAGAATCTTCAAGTATTGATGAGTTCGTTTTGTGTGGATAATGGGAGCAATTTCAATATCCAGGACCTAGAAAAACTCAATCTTCGTGGAGACTTGATCATTTCAGGGATGCAGAATATTGTGAATCCCTCGGATGTATCAAAAGCAAATTTTAAGAGTAAAACTCACCTTGTGAGGCTGGAGTTAAACTGGAGGGAGAATGATGATGTTTCAGAGAAAGAAAATGATGTACTGGGGGAGCTACAACCTTCCAAATACTTGAAAGGGCTATCAGTGGTGAACTATGGCGGAACAAAATTGCCAAGTTGGTTTGGAGATAACTCATTGTGGAATATGGTGTCATTAAAGTTGAGCAACTGTAAAAGCTGTGCTTTGTTGCCTTCGCTTGGAGTGTTGCCTTTCTTGGAAACCATAGTCCTTGAAGATATGAGGAAACTAGAGAAATGGGAATGTAAAACTGTGACGGGTGCTTTTCCACGTCTTCGAGAGCTTTACATAAATAAATGTCCTAAGCTGAAGGAGCAGTTGCCAGAGCAACTTCCTTGTTTGATGAAACTAAATATTACATCCTGCCAACAACTTGTGGCTACTCTTCCACGGGCTCCAGTCATTCAAGAATTAGAGCTATGTAAGTGTGGAAAGATGCAAATGGATTATAACCCATCTACTTTGAAAAAACTCTCCATCTATGGAAGCTTCATGCAAGTATCGCTGCTTGAAAGGATTGGACCCACCATATCTGATGCCTCTCTTGAATATTTGGTCCTTCATGATTGCCCAAATGTGAATTTTCCCATTCATCATTGCCACAATTCCCTTGTATATTTGTCAATCAAGAGTAGCTGTGACTCTCTAACGACCTTTCCGCTTGATCTCTTCCCAAAACTCTATTCTCTTCATCTCCAGTTTCATAATCTACAAATGATTTCACAGGAGCACGCTCACAATCATCTACAGATTCTGAATATTAGCGAGTGCCCTCAATTAAAATCATTGCCTGATGGAGGTTTGTCATCCAGTTTCAATTATCTAAAACTCTGGAATTGTTACCAAATAATGGCCTCACTAAGAGGGGCTTTGGAAGCCAACAACACTTCTCTAGAAACCTTGTCTTTTGGAAAAGTGGATGTGGAGTCTTTTCCTGATGAAGGGTTGCTGCCACTCTCTGTTACTTCTCTAGAAATCCATGATTGCCCAAATCTTAAAAAACTGAACTACAAGGGTCTCTGCCACCTCTCCTCTCTCAAGTCATTGATTATTGATGACTGTCCCAGCCTCCAATGCTTACCAGAGGAGGGTCTGCCCCAATCCATTTCAACCTTCAAAATTCGAGGCAAGTGTCCAATGCTCATACAACGTTGTCAGCAACCAAATGGAGAAGACTGGGGAAAGATTGCTCACTTACAACGTCTATGGATTCCGAGAAAGTAA 3501 0.4027 MALELIGSALLSAFIQAAVDKLTSGQVLEYFGRRKLDDELLNRLKLELVCINALVDDAEQKQVTVVRDAAKVAVKAWLVDVNEAVLDAEDLLDEIDYQVSKCELEADSESQSQTCTSNVWACFKAHSVSSFDREIESRMKKILEKLEYLANQKDDLGLNEARNSGVGSGSKGSKKLPSTSLVGGSVIYGRDYDKEIILNWMISDSGSGNHPSILSVVGMGGIGKTVLAQHVYNDSKVEAKFEIKAWVCVSDEFDVFKLSKAILEAITKSTDDSRDLEMVHGRLKENLEGKRFLVILDDVWNEKQDLWEALQTPLNYGAKESKILVTTRSEKVALAMQSNEVHHLKQLQEDHCWKVLAKHAAIDENSQLDPEFKEIGIKLVEKCKGLPLALKTIGSLLHTKSSVSEWESILTSEIWNLPEEHNNIIPALLLSYHHLPSALKRCFAFCALFPKDYEFDKEDLILLWMAENFLQCPQQSKSMEEVGAQYFDDLLSRSFFQQYPRSWEDTTISYYVMHDLLNDLTNYVSGDSCIRLEAKEAPTISEKTRHFSFVSHDIEHFRRFNGLHRPRLRTFLPLPKNTYFPSWNCEMSIDDLFSKFRFLRVLSFSKELNLTKVPDSICNLKHLRSLDLSHTKITKLPDSTCSLYNLQILKLRFCESLEELPLNLHKLTKLRHLDLRKTKLRKMPMHLGELENLQVLMSSFCVDNGSNFNIQDLEKLNLRGDLIISGMQNIVNPSDVSKANFKSKTHLVRLELNWRENDDVSEKENDVLGELQPSKYLKGLSVVNYGGTKLPSWFGDNSLWNMVSLKLSNCKSCALLPSLGVLPFLETIVLEDMRKLEKWECKTVTGAFPRLRELYINKCPKLKEQLPEQLPCLMKLNITSCQQLVATLPRAPVIQELELCKCGKMQMDYNPSTLKKLSIYGSFMQVSLLERIGPTISDASLEYLVLHDCPNVNFPIHHCHNSLVYLSIKSSCDSLTTFPLDLFPKLYSLHLQFHNLQMISQEHAHNHLQILNISECPQLKSLPDGGLSSSFNYLKLWNCYQIMASLRGALEANNTSLETLSFGKVDVESFPDEGLLPLSVTSLEIHDCPNLKKLNYKGLCHLSSLKSLIIDDCPSLQCLPEEGLPQSISTFKIRGKCPMLIQRCQQPNGEDWGKIAHLQRLWIPRK* 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0928 1166 Gene3D Ribonuclease Inhibitor 528 702 IPR032675 -
Apr5g0928 1166 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 446 IPR027417 -
Apr5g0928 1166 Coils Coil 41 61 - -
Apr5g0928 1166 Pfam Rx N-terminal domain 14 109 IPR041118 -
Apr5g0928 1166 PANTHER OS05G0414200 PROTEIN 21 1024 - -
Apr5g0928 1166 Pfam NB-ARC domain 210 433 IPR002182 GO:0043531
Apr5g0928 1166 PRINTS Disease resistance protein signature 213 228 - -
Apr5g0928 1166 PRINTS Disease resistance protein signature 286 300 - -
Apr5g0928 1166 PRINTS Disease resistance protein signature 383 397 - -
Apr5g0928 1166 PRINTS Disease resistance protein signature 618 634 - -
Apr5g0928 1166 ProSiteProfiles Leucine-rich repeat profile. 622 643 IPR001611 GO:0005515
Apr5g0928 1166 PANTHER DISEASE RESISTANCE PROTEIN RP 21 1024 IPR044974 GO:0006952
Apr5g0928 1166 SUPERFAMILY L domain-like 512 886 - -
Apr5g0928 1166 Gene3D - 346 430 IPR042197 -
Apr5g0928 1166 Gene3D Ribonuclease Inhibitor 706 898 IPR032675 -
Apr5g0928 1166 SUPERFAMILY RNI-like 782 1138 - -
Apr5g0928 1166 Gene3D - 15 155 - -
Apr5g0928 1166 Gene3D Ribonuclease Inhibitor 907 1160 IPR032675 -
Apr5g0928 1166 SMART LRR_typ_2 620 643 IPR003591 -
Apr5g0928 1166 SMART LRR_typ_2 667 690 IPR003591 -
Apr5g0928 1166 Gene3D - 431 523 IPR036388 -
Apr5g0928 1166 Gene3D - 173 343 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0928 Apr-Chr5 13682919 13686419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0928 214 893 WRKY Transcription Factor Family AT5G45050 23.910 4.52e-15 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0928 - - aprc:113865347 2008.42