Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0927 ATGGCATTGGAATTGATTGGTGGTGCTCTTCTTTCTGCTTTCATTCAGGCAGCAGTTGACAAGCTGACTTCTGGTCAAGTTTTGGGGTACTTTCGAAGAAGAAAACTTGACGAGGAACTGCTGAAAAGGTTGAAGCTCAAGCTGGTGTGCATCAATGCTCTGGTAGATGATGCAGAACAAAAGCAGGTCACTGTTGTCAGAGATGCTGCCAAAGCTGCTGTGAAAGCATGGCTTGTTGATGTCAATGAAGCTGTGCTTGATGCAGAGGATCTCTTGGATGAAATAGACTATCAAGTCTCCAAATGTGAATTGGAAGCTGATTCTGAATCTCAATCTCAAACCTGTACTTGCAAGGTATGGACATGTTTCAAGGCTTATTCAGTCAGTTCATTCGATAAGAAAATTGAATCCAGGATGAAACAAATCCTTGAAAAACTAGAGTATCTTGCAAACCAAAAGGATGATCTAGGTTTGAAAGAAACTAGAGATTATTGTCTTGGATCAGGTAGTAAAGCGGCAAAAAAATTGGCTTCAACATCTTTGGTGGGTGGAAGTGTTATTTATGGAAGAGATTATGACAAAGAAATTATCCTTAATTGGATGATATCTGACAGTGGGAGTGGTAACCATCCCTCAATACTTTCTGTTGTGGGTATGGGCGGGATGGGTAAGACCATGCTTGCCCAACATGTATACAATGACTCAAAGGTGGAGGAGGCTAAATTTGATGTCAAAGCTTGGGTCTGTGTTTCAGATGAATTTGATGTTTTCAAGCTATCAAAAGCAATTCTTGAGGCAATCACAAAGTCAACAGATGACAGTAGAGACCTAGAAATGGTTCATGGGAGATTGAAAGAAAATTTGGAAGGGAAGAGACTTCTTGTCATTTTGGATGACGTTTGGAACGAAAAACGAGACCTGTGGGAAGCTTTGCAAACTCCTCTTAATTACGGGGCAAAAGAAAGCAAAATTCTTGTGACGACACGCAGTGAGAAAGTTGCTTTAGCCATGCAGTCAAATGAAGTACATCACCTGAAGCAACTGCAAGAAGATCATTGTTGGAAAGTGCTTGCTAAACATGCAGCCATTGATGAAAATTCTCAATTGGATCCCGAGTTTAAGGAGATAGGTATCAAGTTGGTTGAAAAATGCAAAGGACTGCCTCTAGCCTTGAAAACAATTGGAAGTCTCTTACACACGAAATCGTCGGTTTCGGAATGGGAAAGCATATTGACTAGCGAGATATGGAACTTACCAGAAGAACATAACAATATTATCCCAGCTTTGTTGTTGAGCTATCACCACCTTCCCTCTGCTCTCAAGAGATGCTTTGCTTTTTGTGCTTTGTTCCCAAAAGATTACGAGTTTGACAAGGAGGATCTTATTCTGTTATGGATGGCTGAAAACTTTCTCCAATGCTCCCAACAGAGTAAGAGTATGGAAGAAGTTGGCGCACAGTACTTTGATGATATGTTATCAAGGTCCTTTTTTCAAAAATCTCAAAGAAGTAGGGACAATACAACAACGTGTTATGTCATGCACGACCTTCTCAATGACCTGGCCAATTATGTTAGCGGGTATTCTTGTATCGGATTAGAAGTTAAAGAAGCAACAACTATATGTGAGAAGACGCGTCATTTCTCATTTGTAAGTCGCGGCATTGAACATTTCCGTGGGTTTAAGGGTTTGCATGAACCTAGGTTACGTACATTTCTACCTTTACGAAAGAATGCATGTTATGTTTCTTTATGGAAATGTACGATGTCGATGGATGTTTTGTTCTCAAAGTTCAGGTTCCTACGTGTCTTATCTTTTTCGGAAGAAAGGAGTCTTACAGAGGTGCCTGACTCTATATGCAATCTTAAACATCTTCGTTCTCTAGACCTTTCTCATACCAAAATAACGAAGCTTCCTGATTCAACTTGTTCGCTCTATAACTTACAAATACTGAAGCTGCATTCTTGTGAATCATTGGAAGAGCTGCCCTTGAATTTGCATAAACTCACTAAATTGCGTCACCTCGATTTAAGACAAACTGAGTTGAGAAAGATGCCAAAGCATTTGGGGGAATTAGAGAATCTTCAAGTATTGATGAGTTCGTTTTGTCTGGACTACGGCAGCAATTTCAATATCCAGGACCTAGAAAAACTCAATCTTCGTGGAGGCTTGATCATTTCAGGGATGCAGAATATTGTGAATCCCTCGGATGTATCAAAAGCAAATTTTAAGAGTAAAACTCACCTTGTGACGCTGGGGTTAAAATGGAGTGCGAATGATGATGTTTCAGAGAAAGAAAATGATGTACTGGAGGAGCTACAACCTTCCAAATACTTGAAAAAGCTATTAATCAGGAACTATGGCGGAACAAAATTCCCAAGCTGGTTTGGAGATAACTCATTGTGGAATTTGGTGTCATTAAAGTTGAGCAACTGTAAAAACTCTGCTTTGTTGCCTTCCTTTGGACTGTTGCCTTTCTTGGAAATCTTAGTCCTTGAAGATATGGGGAAACTGGAGAAATGGGAATGTAAAAATGTGACGGGTGCTTTTCCACGTCTTCGAAAGCTTTCCATAAAGAATTGTCCTAAGCTGAAGGAGCAGTTGCCAGAGCAACTTCCATGTTTGATGAGACTATATATTACCTCCTGCGAACAGCTTGTGGCTACTCTTCCACGGGCTCCAGTCATTCAAGAATTAACGGTATTAAGTAGTGGAAAGGTGCAAATGGATTATAACCTATTTACTTTGAAAAAACTTTCCATCGATGGAAGCTTCATGCAAGGATCGCTGCTTGAAAGGATTGGACCCACCATATCTGATGCCTCTCTTGAATATTTGGTCCTTTATGATTGCCCAAATGTGAATTTTCCCATTCACCATTGCCACAATTCCCTTGTAAATTTGTCAATCGAGCGTAGCTGTGACTCTCTAACGACCTTTCCGCTTGATCTCTTCCCAAAACTCTATAATCTTAGTCTCGAGTTGCATAATCTACAAATGATTTCACAGGAGCACGCTCACAATCATCTACAGAGGCTGAATATTAGTGACTGCCCTCAATTAAAATCATTGCCTGATGGAGGTTTGTCATCCAGTTTCAAATATCTAAGTCTCTATAATTGCCCCCAAATAATGGCCTCACTAAGAGGGGCTTTGGAAGCCAACAACACCTCTCTAGAAACCTTGTCTATTGGAGGAGTGGATGTGGAGTCTTTTCCTGATGAAGGGTTGCTGCCACTCTCTGTTACTTCTCTAGAAATCCATGATTGTCCAAATCTTAAAAAACTGAACTCCAAGGGTCTCTGCCACCTCTCCTCTCTCAAGTCATTGATTATTGATGACTGTCCCAGCCTCCAATGCTTACCAGAGGAGGGTCTGCCCCAATCCATTTCAAACTTCGAAATTCGAGGCAACTGTCCAATGCTCATACAACGTTGTCAGCAACCAAATGGAGAAGACTGGGGAAAGATTGCTCACACGATTTTTGAATTCCGGGAAACTAACAAGATGAACCGCACGTTCAAAATTACGCATGCTCCAATTCCCATTTGTCAGAAATCACAGTAA 3564 0.4074 MALELIGGALLSAFIQAAVDKLTSGQVLGYFRRRKLDEELLKRLKLKLVCINALVDDAEQKQVTVVRDAAKAAVKAWLVDVNEAVLDAEDLLDEIDYQVSKCELEADSESQSQTCTCKVWTCFKAYSVSSFDKKIESRMKQILEKLEYLANQKDDLGLKETRDYCLGSGSKAAKKLASTSLVGGSVIYGRDYDKEIILNWMISDSGSGNHPSILSVVGMGGMGKTMLAQHVYNDSKVEEAKFDVKAWVCVSDEFDVFKLSKAILEAITKSTDDSRDLEMVHGRLKENLEGKRLLVILDDVWNEKRDLWEALQTPLNYGAKESKILVTTRSEKVALAMQSNEVHHLKQLQEDHCWKVLAKHAAIDENSQLDPEFKEIGIKLVEKCKGLPLALKTIGSLLHTKSSVSEWESILTSEIWNLPEEHNNIIPALLLSYHHLPSALKRCFAFCALFPKDYEFDKEDLILLWMAENFLQCSQQSKSMEEVGAQYFDDMLSRSFFQKSQRSRDNTTTCYVMHDLLNDLANYVSGYSCIGLEVKEATTICEKTRHFSFVSRGIEHFRGFKGLHEPRLRTFLPLRKNACYVSLWKCTMSMDVLFSKFRFLRVLSFSEERSLTEVPDSICNLKHLRSLDLSHTKITKLPDSTCSLYNLQILKLHSCESLEELPLNLHKLTKLRHLDLRQTELRKMPKHLGELENLQVLMSSFCLDYGSNFNIQDLEKLNLRGGLIISGMQNIVNPSDVSKANFKSKTHLVTLGLKWSANDDVSEKENDVLEELQPSKYLKKLLIRNYGGTKFPSWFGDNSLWNLVSLKLSNCKNSALLPSFGLLPFLEILVLEDMGKLEKWECKNVTGAFPRLRKLSIKNCPKLKEQLPEQLPCLMRLYITSCEQLVATLPRAPVIQELTVLSSGKVQMDYNLFTLKKLSIDGSFMQGSLLERIGPTISDASLEYLVLYDCPNVNFPIHHCHNSLVNLSIERSCDSLTTFPLDLFPKLYNLSLELHNLQMISQEHAHNHLQRLNISDCPQLKSLPDGGLSSSFKYLSLYNCPQIMASLRGALEANNTSLETLSIGGVDVESFPDEGLLPLSVTSLEIHDCPNLKKLNSKGLCHLSSLKSLIIDDCPSLQCLPEEGLPQSISNFEIRGNCPMLIQRCQQPNGEDWGKIAHTIFEFRETNKMNRTFKITHAPIPICQKSQ* 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0927 1187 PRINTS Disease resistance protein signature 213 228 - -
Apr5g0927 1187 PRINTS Disease resistance protein signature 287 301 - -
Apr5g0927 1187 PRINTS Disease resistance protein signature 384 398 - -
Apr5g0927 1187 PRINTS Disease resistance protein signature 619 635 - -
Apr5g0927 1187 Pfam Rx N-terminal domain 11 109 IPR041118 -
Apr5g0927 1187 Coils Coil 41 61 - -
Apr5g0927 1187 Gene3D - 432 523 IPR036388 -
Apr5g0927 1187 ProSiteProfiles Leucine-rich repeat profile. 623 644 IPR001611 GO:0005515
Apr5g0927 1187 Gene3D - 15 130 - -
Apr5g0927 1187 PANTHER DISEASE RESISTANCE PROTEIN RP 19 1025 IPR044974 GO:0006952
Apr5g0927 1187 SMART LRR_typ_2 621 644 IPR003591 -
Apr5g0927 1187 SMART LRR_typ_2 668 691 IPR003591 -
Apr5g0927 1187 Gene3D - 347 431 IPR042197 -
Apr5g0927 1187 PANTHER OS05G0414200 PROTEIN 19 1025 - -
Apr5g0927 1187 Gene3D Ribonuclease Inhibitor 1029 1147 IPR032675 -
Apr5g0927 1187 Gene3D Ribonuclease Inhibitor 898 1028 IPR032675 -
Apr5g0927 1187 Gene3D Ribonuclease Inhibitor 585 897 IPR032675 -
Apr5g0927 1187 Gene3D - 169 344 IPR027417 -
Apr5g0927 1187 SUPERFAMILY L domain-like 512 899 - -
Apr5g0927 1187 SUPERFAMILY L domain-like 912 1153 - -
Apr5g0927 1187 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 447 IPR027417 -
Apr5g0927 1187 Pfam NB-ARC domain 210 434 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0927 Apr-Chr5 13665670 13669233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0927 214 408 WRKY Transcription Factor Family AT5G45050 25.000 8.96e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0927 - - aprc:113865347 2001.1