Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0926 ATGGCATTGGAATTAATTGGTGGTGCTCTTCTTTCTGCTTTCATTCAGGCAGCAGTTAACAAGCTGACTTCTGGTCAAGTTTTGGAGTACTTTCGAAGAAGAAAACTTGACGAGGAACTGCTGAACAGACTGAAGCTCAAGCTACTGTGCATCAATGCTCTGGTAGATGATGCAGAACAAAAGCAGGTCACTGTAGTCAGAGATGCTGCCAAAGTTGCTGTCAAAGCATGGCTTGTTGATGTCAATGAAGCTGTTCTTGATGCAGAGGATCTCTTGGATGAAATAGACTATCAAATCTCCAAATGTGAATTGGAAGCTGATTCTGAATCTCAATCTCAAACCTGTACTTGCAAGGTATGGACACGTTTCAAGGCTTATTCTGTCAGTTCATTCGATAAGAAAATTGAAACCAGGATGAAACAAATCCTTGAAAAACTAGAGTATCTTGCAAACCAAAAGGATGATCTAGGTTTGAAAGAGGCTAGAGATTCTGGCGTTGGATCAGGTAGTAAAGGGTCAAAAAAATTGGCTTCAACATCTTTGGTGGGTGGAAGTGTTATTTATGGAAGAGATTATGACAAAGAAATTATCCTTAATTGGATGATATCTGACAGTGGGAGTGGTAACCATCCCTCAATACTTTCTGTTGTGGGTATGGGCGGGATGGGTAAGACCATGCTTGCCCAACATGTATACAATGACTCAAAGGTGGAGGAGGCTAAATTTGATATCAAAGCTTGGGTCTGTGTTTCAGATGAATTTGATGTTTTCAAGCTATCAAAAGCAATTCTTGAGGCAATCACAAAGTCAAAAGATGACAGTGGAGACCTAGAAATGGTTCATGGAAGATTGAAAGAAAATTTGGAAGGGAAGAGATTTCTTGTCATTTTGGATGACGTTTGGAACGAAAAACGAGACCTGTGGGAAGCTTTGCAAACTCCTCTTAATTACGGGGCAAAAGAAAGCAAAATTCTTGTGACGACACGCAGTGAGAAAGTTGCTTTAGCCATGCAGTCAAATGAAGTACATCACCTAAAGCAAATACAAGAAGATCATTGCTGGAAAGTGCTTGCTAGACATGCATTCATTGATGAAAATTCTCAATTGGATCCCGAGTTTAAGGAGATAGGTATGAAGTTGGTTGAAAAATGCAAAGGACTGCCTCTAGCCTTGAAAACAATTGGAAGTCTCTTACACACAAAATCGTCGGTTTCGGAATGGGAAAGTGTACTGACAAGCGAGATATGGAGCTTACCAGAAGAACATAACAATATTATCCCAGCTTTGTTGTTGAGCTATCACCACCTTCCCTCTGCTCTCAAGAGATGCTTTGCTTTTTGTAGTTTGTTCCCAAAAGATTACGAGTTTGACAAGGAGGATCTTATTCTGTTATGGATGGCTGAAAACTTTCTCCAATGCCACCAACAGAGTAAGAGTATGGAAGAAGTTGGCGCACAGTACTTTGATGATCTGTTATCAAGGTCCTTTTTTCAACAAACCCAAAGAAGTAGGTCCAATACAACAACGTGTTATGTCATGCACGACCTTCTCAATGACCTGGCAAATTATGTTAGCGGGGATTCTTGTATCAGATTAGAAGCGAAAGAAGCACCAACTATATCTGAAAAGACACGTCATTTCTCATTTGTAAGTTACCGCATTGAACATTTTCACGGGTTTAAGGGTTTGCATGAACCTAGGTTACGTACATTTCTACCTTTACCAAAGAATGCATATTATGTTTCTTCATGGAAAAGTACGATGTCGATAGATAATTTGTTCTCAAAGTTCAGGTTCCTACGTGTCTTATCTTTTTTGAAAGAAGGGAGTCTTACAGAGGTGCCTGACTCTATATGCAATCTTAAACATCTTCGTTCTCTAGACCTTTCTCATACCAAAATAACAAAGCTTCCTGATTCAACTTGTTCTCTCTATAACTTACAAATACTGAAGCTGCATTCTTGTGAATCATTGGAAGAGCTGCCCTTGAATTTGCATAAACTCACAAAATTGCGTCACCTCGATTTAATAAAAACTAAGTTGAGAAAGATGCCAAAGCATTTGGGGGAATTAGAGAATCTTCAAGTATTGATGAGTTCTTTTTGTGTGGACAATGGCAGCAATTTCAATATCCAGGACCTAGAAAAACTCAATCTTCGTGGAGACTTGATCATTTCAGGGATGCAGAATATTGTGAATCCCTCGGATGTATCAAAAGCAAATTTCAAGAGTAAAACTCACCTTTTGAGGCTGGAGTTAAAATGGATTGAGAATAATGATGTTTCAGAGAAAGAAAATGATGTACTGGAGGAACTACAACCTTCCAAATACTTGAAAGGGCTATTAGTGGAGAACTATGGCGGAACAAAATTGCCAAGCTGGTTTGGAGATAACTCGTTGTGGAATAATATGGTGTCATTAAAGTTGAGCAAATGTAAAAGCTTTGCTTTGTTGCCTTCGCTTGGACTGTTGCCTTTCTTGGAAATCTTAGTCCTTGAAGATATGCGGAAACTGGAGAAATGGGAATGTAAAACTGTGACGGATGCTTTTCCACGTCTTCGAGAGCTTTCCATAGAGAAATGTCCGAAGCTGAAGGAGCACTTGCCAGAGCAACTTCCTTGTTTGATGAAACTAAATATTACATCCTGCGAAGAGCTTGTGGCTGCTCTTCCTAGGGCTCCAGTCATTCAAGAATTATCGCTATGGGGTTGTGGAAAGATGCAAATGTATTATAACCCATCTACTTTGAAAAAACTCATCATCTATGGAAGCTTCATGCAAGGATCGCTGCTTGAAAGGATTGGACCCACCATATCTGATGCCTCTCTTGAATCGTTGGCCCTTCATAATTGCCCAAATTTGAATTTTCCCATCCACCGTTGCCACAATTCCCTTGTATATTTGTCAATCAGGGGTAGCTGTGACTCTCTAAGCACCTTTCCGCTTGATCTCTTCCCAAAACTCTATTCTCTTAGTCTCGAGTTTTATAATCTACAGATGATTTCACAGGAGCACGCTCACAATCATCTACAGATTCTGAATATTAGTGAGTGCCCTCAATTAAAATCATTGCCTGATGGAGGTTTGTCATCCAGTTTCAAATATCTAAGACTCTGGAATTGCTACCAAATAATGCCCTCACTAAGAGGGGCTTTGGAAGCCAACAACACCTGTCTAGAAATCTTGTCTATTGGAGAAGTGGATGTGGAGTCTTTTCCCGATGAAGGGTTGCTGCCGCTCTCTGTTACTTCTCTAGAAATCCATGATTGTCCAAATCTTAAAAAACTGAACTACAAGGGTCTCTGCCACCTCTCGCCTCTCAAGTCATTGATTATTGATGACTGTCCCAGCCTCCAATGCTTACCAGAGGAGGGTCTGCCCCGATCCATTTCAACCTTCGAAATTCGAGGCAACTGTCCAATGCTCATACAACGTTGTCAGCAACCAAATGGAGAAGACTGGGGAAAGATTGCTCACATACAAGATTTAGTGATTCCGAGGAAACGAACAAGATGA 3516 0.4036 MALELIGGALLSAFIQAAVNKLTSGQVLEYFRRRKLDEELLNRLKLKLLCINALVDDAEQKQVTVVRDAAKVAVKAWLVDVNEAVLDAEDLLDEIDYQISKCELEADSESQSQTCTCKVWTRFKAYSVSSFDKKIETRMKQILEKLEYLANQKDDLGLKEARDSGVGSGSKGSKKLASTSLVGGSVIYGRDYDKEIILNWMISDSGSGNHPSILSVVGMGGMGKTMLAQHVYNDSKVEEAKFDIKAWVCVSDEFDVFKLSKAILEAITKSKDDSGDLEMVHGRLKENLEGKRFLVILDDVWNEKRDLWEALQTPLNYGAKESKILVTTRSEKVALAMQSNEVHHLKQIQEDHCWKVLARHAFIDENSQLDPEFKEIGMKLVEKCKGLPLALKTIGSLLHTKSSVSEWESVLTSEIWSLPEEHNNIIPALLLSYHHLPSALKRCFAFCSLFPKDYEFDKEDLILLWMAENFLQCHQQSKSMEEVGAQYFDDLLSRSFFQQTQRSRSNTTTCYVMHDLLNDLANYVSGDSCIRLEAKEAPTISEKTRHFSFVSYRIEHFHGFKGLHEPRLRTFLPLPKNAYYVSSWKSTMSIDNLFSKFRFLRVLSFLKEGSLTEVPDSICNLKHLRSLDLSHTKITKLPDSTCSLYNLQILKLHSCESLEELPLNLHKLTKLRHLDLIKTKLRKMPKHLGELENLQVLMSSFCVDNGSNFNIQDLEKLNLRGDLIISGMQNIVNPSDVSKANFKSKTHLLRLELKWIENNDVSEKENDVLEELQPSKYLKGLLVENYGGTKLPSWFGDNSLWNNMVSLKLSKCKSFALLPSLGLLPFLEILVLEDMRKLEKWECKTVTDAFPRLRELSIEKCPKLKEHLPEQLPCLMKLNITSCEELVAALPRAPVIQELSLWGCGKMQMYYNPSTLKKLIIYGSFMQGSLLERIGPTISDASLESLALHNCPNLNFPIHRCHNSLVYLSIRGSCDSLSTFPLDLFPKLYSLSLEFYNLQMISQEHAHNHLQILNISECPQLKSLPDGGLSSSFKYLRLWNCYQIMPSLRGALEANNTCLEILSIGEVDVESFPDEGLLPLSVTSLEIHDCPNLKKLNYKGLCHLSPLKSLIIDDCPSLQCLPEEGLPRSISTFEIRGNCPMLIQRCQQPNGEDWGKIAHIQDLVIPRKRTR* 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0926 1171 Gene3D Ribonuclease Inhibitor 709 895 IPR032675 -
Apr5g0926 1171 Coils Coil 41 61 - -
Apr5g0926 1171 Pfam Rx N-terminal domain 14 109 IPR041118 -
Apr5g0926 1171 SUPERFAMILY L domain-like 939 1157 - -
Apr5g0926 1171 Gene3D - 15 130 - -
Apr5g0926 1171 PRINTS Disease resistance protein signature 213 228 - -
Apr5g0926 1171 PRINTS Disease resistance protein signature 287 301 - -
Apr5g0926 1171 PRINTS Disease resistance protein signature 384 398 - -
Apr5g0926 1171 PRINTS Disease resistance protein signature 619 635 - -
Apr5g0926 1171 Gene3D Ribonuclease Inhibitor 528 705 IPR032675 -
Apr5g0926 1171 ProSiteProfiles Leucine-rich repeat profile. 623 644 IPR001611 GO:0005515
Apr5g0926 1171 Gene3D - 432 523 IPR036388 -
Apr5g0926 1171 Gene3D - 347 431 IPR042197 -
Apr5g0926 1171 PANTHER DISEASE RESISTANCE PROTEIN RP 20 1026 IPR044974 GO:0006952
Apr5g0926 1171 PANTHER OS05G0414200 PROTEIN 20 1026 - -
Apr5g0926 1171 SMART LRR_typ_2 621 644 IPR003591 -
Apr5g0926 1171 SMART LRR_typ_2 668 691 IPR003591 -
Apr5g0926 1171 Pfam NB-ARC domain 210 434 IPR002182 GO:0043531
Apr5g0926 1171 SUPERFAMILY L domain-like 512 886 - -
Apr5g0926 1171 Gene3D - 171 344 IPR027417 -
Apr5g0926 1171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 447 IPR027417 -
Apr5g0926 1171 Gene3D Ribonuclease Inhibitor 896 1161 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0926 Apr-Chr5 13658783 13662298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0926 214 868 WRKY Transcription Factor Family AT5G45050 22.707 3.43e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0926 - - aprc:113865347 2017.28