Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0921 ATGGAAGAGAAAGAAGAAACGAAGGAAGATGATAACATTAACAACAACGAGGCTTCTTCTCTTCCAAAAGAAGAGAGCGTGAGAAAAGGGTTTTGTGGTGAAAGAGTTAAGAGAGATGAGTGGAGTGAAGGGGCAGTGTCAACACTTCTTTCGGCCTATGAAGCCAAATGGGTACTCAGAAACAGAGCCAAACTCAAAGGCCATGATTGGGAAGACGTCGCAAGGCACGTCTCCTCACGTGCCAACTGCACCAAATCACCCAAGACTTCAACGCAGTGCAAGAACAAGGTCGAGTCTATGAAGAAGAGGTACAGATCAGAGTCAGCGAGTGCGGATCACGCCTCATCTTGGCCTCTCTATTCACGACTTGATCTTCTTCTCCGTGGAACTGGCCCAGTCACGCCCGTCACCGCCGTGCCTCCGCCGTCTCAGTCGCCGTTCGACCCGTCACCACCGCCTCTTCTGTCACCACCGCCACCTCTTGCTGCTGCTTCGGCCCCAATTGCAAATGCGCAAAACTCACCTGGCTCCAATGGCGTTGATAAAATACCCAAGGAAGATGGGTTAGCAACTAAGTCATGTGATGATGAATCTAACAAGAATGCATTGGACACGGATAGCAGCACGCCTGCGCTTTATAGCAAGAAGGAAGAGTTGAGAAGTAACAAGAGGAAGAAGAAAACAGTTGACAACAATGGAAGAAGAAGGAAAGAGTATGTGGAGATAGCAAAAAGCTTAAGATGGTTAGCGGAAGCAATGGTAAGGTCAGAACAAGCAAGAATGGACACAGTGAAAGAGATAGAGAGGATGAGAGTTGAAGCTGAAGCTAAACGAGGGGAAATGGATCTTAAGCGAACCGAAATAATAGCCAACACACAATTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAAAGGTAGTGTTGATTCATCTTTAAGAATTGGAAGAAGTTAA 954 0.4675 MEEKEETKEDDNINNNEASSLPKEESVRKGFCGERVKRDEWSEGAVSTLLSAYEAKWVLRNRAKLKGHDWEDVARHVSSRANCTKSPKTSTQCKNKVESMKKRYRSESASADHASSWPLYSRLDLLLRGTGPVTPVTAVPPPSQSPFDPSPPPLLSPPPPLAAASAPIANAQNSPGSNGVDKIPKEDGLATKSCDDESNKNALDTDSSTPALYSKKEELRSNKRKKKTVDNNGRRRKEYVEIAKSLRWLAEAMVRSEQARMDTVKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGSVDSSLRIGRS* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0921 317 MobiDBLite consensus disorder prediction 95 109 - -
Apr5g0921 317 MobiDBLite consensus disorder prediction 211 232 - -
Apr5g0921 317 MobiDBLite consensus disorder prediction 135 164 - -
Apr5g0921 317 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 14 313 - -
Apr5g0921 317 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 313 IPR044823 -
Apr5g0921 317 MobiDBLite consensus disorder prediction 185 202 - -
Apr5g0921 317 MobiDBLite consensus disorder prediction 81 111 - -
Apr5g0921 317 Gene3D - 41 106 - -
Apr5g0921 317 Pfam Myb/SANT-like DNA-binding domain 38 125 IPR044822 -
Apr5g0921 317 MobiDBLite consensus disorder prediction 1 29 - -
Apr5g0921 317 MobiDBLite consensus disorder prediction 134 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0921 Apr-Chr5 13595517 13615453 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0921 37 299 Trihelix Transcription Factor Family AT3G14180 24.179 2.25e-21 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Apr5g0921 Myb_DNA-bind_4 2.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0921 - - gmx:100784245 437.958