Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g0921 | ATGGAAGAGAAAGAAGAAACGAAGGAAGATGATAACATTAACAACAACGAGGCTTCTTCTCTTCCAAAAGAAGAGAGCGTGAGAAAAGGGTTTTGTGGTGAAAGAGTTAAGAGAGATGAGTGGAGTGAAGGGGCAGTGTCAACACTTCTTTCGGCCTATGAAGCCAAATGGGTACTCAGAAACAGAGCCAAACTCAAAGGCCATGATTGGGAAGACGTCGCAAGGCACGTCTCCTCACGTGCCAACTGCACCAAATCACCCAAGACTTCAACGCAGTGCAAGAACAAGGTCGAGTCTATGAAGAAGAGGTACAGATCAGAGTCAGCGAGTGCGGATCACGCCTCATCTTGGCCTCTCTATTCACGACTTGATCTTCTTCTCCGTGGAACTGGCCCAGTCACGCCCGTCACCGCCGTGCCTCCGCCGTCTCAGTCGCCGTTCGACCCGTCACCACCGCCTCTTCTGTCACCACCGCCACCTCTTGCTGCTGCTTCGGCCCCAATTGCAAATGCGCAAAACTCACCTGGCTCCAATGGCGTTGATAAAATACCCAAGGAAGATGGGTTAGCAACTAAGTCATGTGATGATGAATCTAACAAGAATGCATTGGACACGGATAGCAGCACGCCTGCGCTTTATAGCAAGAAGGAAGAGTTGAGAAGTAACAAGAGGAAGAAGAAAACAGTTGACAACAATGGAAGAAGAAGGAAAGAGTATGTGGAGATAGCAAAAAGCTTAAGATGGTTAGCGGAAGCAATGGTAAGGTCAGAACAAGCAAGAATGGACACAGTGAAAGAGATAGAGAGGATGAGAGTTGAAGCTGAAGCTAAACGAGGGGAAATGGATCTTAAGCGAACCGAAATAATAGCCAACACACAATTAGAGATTGCTAGGATCTTTGCAAGTGTCAACAAAGGTAGTGTTGATTCATCTTTAAGAATTGGAAGAAGTTAA | 954 | 0.4675 | MEEKEETKEDDNINNNEASSLPKEESVRKGFCGERVKRDEWSEGAVSTLLSAYEAKWVLRNRAKLKGHDWEDVARHVSSRANCTKSPKTSTQCKNKVESMKKRYRSESASADHASSWPLYSRLDLLLRGTGPVTPVTAVPPPSQSPFDPSPPPLLSPPPPLAAASAPIANAQNSPGSNGVDKIPKEDGLATKSCDDESNKNALDTDSSTPALYSKKEELRSNKRKKKTVDNNGRRRKEYVEIAKSLRWLAEAMVRSEQARMDTVKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNKGSVDSSLRIGRS* | 318 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g0921 | 317 | MobiDBLite | consensus disorder prediction | 95 | 109 | - | - | |
Apr5g0921 | 317 | MobiDBLite | consensus disorder prediction | 211 | 232 | - | - | |
Apr5g0921 | 317 | MobiDBLite | consensus disorder prediction | 135 | 164 | - | - | |
Apr5g0921 | 317 | PANTHER | SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR | 14 | 313 | - | - | |
Apr5g0921 | 317 | PANTHER | TRIHELIX TRANSCRIPTION FACTOR ASIL2 | 14 | 313 | IPR044823 | - | |
Apr5g0921 | 317 | MobiDBLite | consensus disorder prediction | 185 | 202 | - | - | |
Apr5g0921 | 317 | MobiDBLite | consensus disorder prediction | 81 | 111 | - | - | |
Apr5g0921 | 317 | Gene3D | - | 41 | 106 | - | - | |
Apr5g0921 | 317 | Pfam | Myb/SANT-like DNA-binding domain | 38 | 125 | IPR044822 | - | |
Apr5g0921 | 317 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Apr5g0921 | 317 | MobiDBLite | consensus disorder prediction | 134 | 232 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g0921 | Apr-Chr5 | 13595517 | 13615453 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g0921 | 37 | 299 | Trihelix Transcription Factor Family | AT3G14180 | 24.179 | 2.25e-21 | 92.0 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | Trihelix | Apr5g0921 | Myb_DNA-bind_4 | 2.1e-19 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g0921 | - | - | gmx:100784245 | 437.958 |