Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0919 ATGAAAAAGAAAATGAAAACGAAAGTGGCATGTTGTTCCGTGTGCCAAACGCGCTACGACGAGGAGGAGCGGGTCCCACTGCTTCTCCAATGCGGCCATGGCTTCTGCCGAGACTGCCTTTCTAGAATGTTCTCCGCTTCAACGGACACCACGCTCACGTGTCCTCCATGCCGCCACGTGTCCCTCGTCGGAAACTCCGTTTACGCGCTTCCCAAAAACTACCCTGTCCTCGCGCTCCTCCGTTCGCCGTCTTCTAACGCCGTGAGGTCCGTTCTTGACTTCGATTTCGATTACACGGACGAAGAAGACGAAGAAGAAGAGGAAGACGGCGGCGTTTTGCGGCGGAGCAGTGCGGCGGCGGTGGTGGCGGCGCACGGGGAAGTGAGGCTGGTGAGGCGGATTGGGGAGGGGAGGAGGGAGGGCGTGGAGACGTGGACGGCGGTGATCGGCGGCGGAGGGCGGCAGAGCGGGCGTAAGGTGGCGGTGAAGAAGGTGGACGCGGTGGAGGAGGTGGAGTGGGTGATGGAGAAGCTTGAGGTTTTGCGAAGGGGCTCAATGTGGTGTAGGAATGTGTGCACGTTTCATGGGGCAATGAGAGTTGGTGATAGTTTGTGTATTGTGATGGACCGGTGTTATGGATCGGTTCAGTCTGAGATGCAACGCAACGAGGGAAGACTCACTCTGGAGCAAGTATTAAGATATGGAGCTGACATTACGCGAGGGATTGCTGAGCTTCATGCTGCAGGCGTTGTTTGCATGAATATAAAACCATCCAATCTTCTTCTCGATTCAAATGGCCATGCAGTGGTTTCTGATTATGGACTTGCTGCAATTCTGAAGAAGCATTCCTGCTGGAAGGCGCAACCTGAGTGTTATGCCTCAAAGACCCACTCCTGTATGGAATGTACAATGCTTAGCCCACATTATACAGCTCCAGAGGCTTGGGGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCAACAGAGTCTGATTCATGGAGTTTTGGCTGTACGCTGGTGGAGATGTGCACAGGTTTTGTTCCTTGGGCTGGTTTAAGTACAGAGGAAATTTATCAAGCAGTTGTCAAGGCGAAGAAACTGCCTCCACAATATGCTAGTGTGGTTGGTGGTGGAATACCTAGTGATTTGTGGAGGATGATTGGAGAGTGCTTGCAGTTTAAACCATCTAAAAGGCCTAGTTTTAATGCAATGTTAACAATATTTCTTCGTCATTTACAGGGAATACCCCGCAGCCCTCCTGCAAGCCCTGACAATGACTTCGTTAAAAGCTTTTCATCAAATGGGATGGAGTTGTCCCCTTTGCCTGAATTAGAAGTTTCTCAGCAAAACCCATTCCATCTTCACCAACTTGTTTCTGCGGGGGATGTCAGAAGTGTTAGGGATCTTCTTGTCAAGGCTGCATCAGATTATGGCAGCAACTACCTATCTTCTCTATTGGAAACTCAAAATGCTGAAGGACAAACCGCTCTCCACTTGGCTTGTAGACGTGGCAGTACAGAACTTGTTGAGGCTATTTTGGAGTATGAAGAGGCAAATGTTGACGTCTTGGACAAAGATGGAGATCCACCTCTTGTTTATGCATTAGCTGCAGGATCCCCGGAATGTGTTCATGGTCTTATTAAAAGAAGTGCTAATGTGAGGTCACGGTTGAAAGATGGCTTTGGCCCTTCTGTTGCTCATGTTTGTGCTTATCATGGCCAACCAGATTGCATGCAAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATCTGTACTGCATATAGCAGTTGCCAAGAAGTACACTGAGTGCGCTCTTGTGATACTGGAAAGTGGAGGCAGTAGATCAATGGCCATCTTGAATTCAAAAAATATGACACCGCTACACTTGTGTGTGGCAACATGGAATGTTGCCGTTGTAAAAAGATGGGTGGGAGTTGCAACATCTGATGAGCTTGCTGAATCAATTGACATACCGAGCTCTGTGGGCACTGCTTTGTGCATGGCTGCTGCCTCTAAGAAAGATCATGAAAGTGAGGGGAGAGAATTGGTGCAAATATTACTTGCTGCAGGAGCAGATCCATATGCTCAAGATTCACAGCGCGGGTGGACAGCTTTGCATATAGCTGTTATGACTGATGATGTTGAATTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGCAATGCGCACAACAGCATACCACTACACATAGCCTTAGCTAGGGGAGCTAAGTCATGTGTTCAACTACTTCTATCTGTTGGGGCAAATTGTAGTTTGCAGGATGATGATGGTAACACTTCTTTCCATATAGCAGCAGATACAGCAAAAAGGATACGTGAAAATCTTGACTGGCTCATTGTTATGCTACGGAATCCTAATGCTGATGTTGTAGTCAGAAACCACAGTGGCAAGACTCTACGTGACATCTTGGAGGTTCTTCCCCGAGAATGGATATCTGAAGATCTGTTAGATGCACTCATGAACAAAGGAGTTTGTCTCTCTCCTACAATATTTGACGTGGGAGACTGGGTGAAGTTTAGAAAAACTTTCATAGCTCCAACAAATGGGTGGGCAGGTGATCGGCAGAAGCTTGTGGGCTTTGTGCAAAAAGTTTCAGACAAGGATAATCTCATTGTTTCATTTTGTTCTGGAGAGTATTGTGTTTTGGCAAATGAAGTTGTAAAAGTCATTCCATTAGACAGGGGACAACATGTTCAGCTTAAAGAGGATGTGAAAGAGCCCAGGTTTGGTTGGCCGGGGCAGTCGCGTGACAGCATTGGGACAGTATTATGTGTTGATGATGATGGGATCATCCGTGTTGGGTTTCCTGGACAATCCAGAGGATGGAAAGCGGACCCAGGAGAGTTGGAACGGGTTGAGGAGTTCAAGGTTGGAGACTGGGTTCGTATTCGCCCTTCTCTTACATCTACAAAGTATGGGTTAGGATCTGTGACACCAGGAAGCACTGGCATTGTATATTGTATCAGACCAGACAGTAGTTTGTTGATAGAACTGAGTTATCTTTCAACTCCATGGCATTGTGAACCAGAGGAGGTTGAACATGTTGTCCCTTTTAGGATCGATGATCAGGTATGTGTGAAGCGATCTGTTGCAGAACCTAGATATGCTTGGGGGGGTGAGACACATCATAGTGTTGGAAAAATAAGAGAGATTGAAAGTGATGGCCTCTTAATAATAGATATACCAAACCGACCTGTTCCATGGCAAGCAGATCCATCAGATATGGAGAAGTTAGAAGATTTTAAGGTTGGAGATTGGGTCAGAGTTAAGGCTTCAGTGTCTGCTCCAAGATATGGATGGGAGGATATTACAAGAAACAGTATTGGAGTAATTCATAGCTTGGAGGACGATGGTGATATGGGTATTGCCTTTTGCTTCAGGAATAAGCTTTTTCCTTGCTCGGTCACTGATGTGGAGAAAGTTCCCCATTTTGAGGTGGGGCAAGAAATTCGTATGATTCCATCTTTGAACCAGCCAAGACTTGGACGGTCAAACGAATCTCCAGCTACTGTTGGAAAAATAGTGAGAATTGATCTGGATGGTGCTCTCAATGTGAGGGTTCCTGGTAGGCGGAGCTTGTGGAAAGTTTCTCCTGGTGATGTGGAACAACTTCCTGGATTTGAAGTTGGTGACTGGGTACGCTCAAAACCAAGCCTGGGAAGCAGATCAAGCTATGACTTGAGTAGTTTTGGAAGAGAAAGTATAGCTGTTGTACATAGTGTACAGGATTCTGGGTACTTGGAGTTGGCTTGCTGTTTCCGTAAGTTGAAGTCATGGACTCATTATACAGAAGTTGAAAAGGTTCCTGGCTTTAAAGTTGGACAATATGTTAGGTTTAGAACTGGTTTGGTGGAACCGAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCACGAGGTGTTTTAATCAGCATTCATGCTGATGGAGAAGTGAAGGTAGCATTCTTTGGTTTGCCTGAATTGTGGAGAGGAGATCCTGCAGACCTGGAAATTGAGCAGACGTTTGAAGTGGGAGAGTGGGTGAGGTTGAAAGATAATGCCAATGATTGGAAATCAATTGGACCAGGTAGTGTTGGTGTTGTACAAGGCATAGGACATGAAGGAGATGAAGGTAACAGAAGTGCTTATGTTGCCTTCTGTGGAGAGCAAGAAAGGTGGGTAGGACCAAGTTCCCATCTTGAAAGAGTTCACAAACTCTTTGTTGGACAGAAGGTTAGAGTTAAACTTAACGTAAAGCAACCAAGATTTGGTTGGTCAGGGCACACTCATGAAAGCATTGGAATGATTCAAACCATCGATGCTGATGGAAAGCTTCGAATATACACACCAGTGGGATCAAAAGCATGGATGTTGGACCCATCAGAAGTGGAGGCGGTTGAACAGAAGGAACTCTGTATTGGAGACTGGGTCAAGGTTAAAGCATCAGTTTCAACCCCAACTCACCAGTGGGGAGAAGTGACTCATTCAAGCATAGGAGTGGTGCATCGGATGGAAAATGAGGATCTGTGGGTGACTTTCTGTTTTATGGAGAGGTTATGGCTTTGTAAGGCAGGGGAAATGGAACAGGTTAGGCCATTTAAAGTGGGAGACAATGTTAGGATCAAAGATGGATTGGTGACCCCACGTTGGGGATGGGGAATGGAGACACATGCCAGTAAGGGACGGGTGGTAGGAGTAGATGCAAATGGCAAGCTAAGAATAAAGTTTCAGTGGAGGGAAGGGAGACCCTGGGTAGGAGACCCTTCTGATATTGTCCTTGATCAGGATTGA 4839 0.4644 MKKKMKTKVACCSVCQTRYDEEERVPLLLQCGHGFCRDCLSRMFSASTDTTLTCPPCRHVSLVGNSVYALPKNYPVLALLRSPSSNAVRSVLDFDFDYTDEEDEEEEEDGGVLRRSSAAAVVAAHGEVRLVRRIGEGRREGVETWTAVIGGGGRQSGRKVAVKKVDAVEEVEWVMEKLEVLRRGSMWCRNVCTFHGAMRVGDSLCIVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADITRGIAELHAAGVVCMNIKPSNLLLDSNGHAVVSDYGLAAILKKHSCWKAQPECYASKTHSCMECTMLSPHYTAPEAWGEPVKKSLNLFWDDAIGISTESDSWSFGCTLVEMCTGFVPWAGLSTEEIYQAVVKAKKLPPQYASVVGGGIPSDLWRMIGECLQFKPSKRPSFNAMLTIFLRHLQGIPRSPPASPDNDFVKSFSSNGMELSPLPELEVSQQNPFHLHQLVSAGDVRSVRDLLVKAASDYGSNYLSSLLETQNAEGQTALHLACRRGSTELVEAILEYEEANVDVLDKDGDPPLVYALAAGSPECVHGLIKRSANVRSRLKDGFGPSVAHVCAYHGQPDCMQELLLAGADPNAVDDEGESVLHIAVAKKYTECALVILESGGSRSMAILNSKNMTPLHLCVATWNVAVVKRWVGVATSDELAESIDIPSSVGTALCMAAASKKDHESEGRELVQILLAAGADPYAQDSQRGWTALHIAVMTDDVELVKVILAAGVDVNIRNAHNSIPLHIALARGAKSCVQLLLSVGANCSLQDDDGNTSFHIAADTAKRIRENLDWLIVMLRNPNADVVVRNHSGKTLRDILEVLPREWISEDLLDALMNKGVCLSPTIFDVGDWVKFRKTFIAPTNGWAGDRQKLVGFVQKVSDKDNLIVSFCSGEYCVLANEVVKVIPLDRGQHVQLKEDVKEPRFGWPGQSRDSIGTVLCVDDDGIIRVGFPGQSRGWKADPGELERVEEFKVGDWVRIRPSLTSTKYGLGSVTPGSTGIVYCIRPDSSLLIELSYLSTPWHCEPEEVEHVVPFRIDDQVCVKRSVAEPRYAWGGETHHSVGKIREIESDGLLIIDIPNRPVPWQADPSDMEKLEDFKVGDWVRVKASVSAPRYGWEDITRNSIGVIHSLEDDGDMGIAFCFRNKLFPCSVTDVEKVPHFEVGQEIRMIPSLNQPRLGRSNESPATVGKIVRIDLDGALNVRVPGRRSLWKVSPGDVEQLPGFEVGDWVRSKPSLGSRSSYDLSSFGRESIAVVHSVQDSGYLELACCFRKLKSWTHYTEVEKVPGFKVGQYVRFRTGLVEPRWGWRGAQPESRGVLISIHADGEVKVAFFGLPELWRGDPADLEIEQTFEVGEWVRLKDNANDWKSIGPGSVGVVQGIGHEGDEGNRSAYVAFCGEQERWVGPSSHLERVHKLFVGQKVRVKLNVKQPRFGWSGHTHESIGMIQTIDADGKLRIYTPVGSKAWMLDPSEVEAVEQKELCIGDWVKVKASVSTPTHQWGEVTHSSIGVVHRMENEDLWVTFCFMERLWLCKAGEMEQVRPFKVGDNVRIKDGLVTPRWGWGMETHASKGRVVGVDANGKLRIKFQWREGRPWVGDPSDIVLDQD* 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0919 1612 ProSiteProfiles Ankyrin repeat region circular profile. 714 745 - -
Apr5g0919 1612 ProSiteProfiles Ankyrin repeat region circular profile. 499 521 - -
Apr5g0919 1612 Pfam Protein kinase domain 148 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0919 1612 SMART ring_2 12 57 IPR001841 -
Apr5g0919 1612 Gene3D - 654 753 IPR036770 -
Apr5g0919 1612 ProSiteProfiles Protein kinase domain profile. 128 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0919 1612 ProSiteProfiles Ankyrin repeat profile. 714 746 IPR002110 GO:0005515
Apr5g0919 1612 Gene3D - 449 653 IPR036770 -
Apr5g0919 1612 PRINTS Ankyrin repeat signature 500 515 IPR002110 GO:0005515
Apr5g0919 1612 PRINTS Ankyrin repeat signature 730 744 IPR002110 GO:0005515
Apr5g0919 1612 Pfam Mind bomb SH3 repeat domain 1488 1606 IPR040847 -
Apr5g0919 1612 Pfam Mind bomb SH3 repeat domain 855 973 IPR040847 -
Apr5g0919 1612 Pfam Mind bomb SH3 repeat domain 1231 1352 IPR040847 -
Apr5g0919 1612 Pfam Mind bomb SH3 repeat domain 1358 1479 IPR040847 -
Apr5g0919 1612 Pfam Mind bomb SH3 repeat domain 979 1099 IPR040847 -
Apr5g0919 1612 Pfam Mind bomb SH3 repeat domain 1105 1225 IPR040847 -
Apr5g0919 1612 Pfam RING-type zinc-finger 12 55 IPR027370 -
Apr5g0919 1612 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 6 1611 - -
Apr5g0919 1612 ProSiteProfiles Ankyrin repeat region circular profile. 747 779 - -
Apr5g0919 1612 Gene3D - 754 830 IPR036770 -
Apr5g0919 1612 SUPERFAMILY Ankyrin repeat 495 791 IPR036770 -
Apr5g0919 1612 SMART ANK_2a 636 665 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 533 562 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 601 630 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 780 815 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 714 743 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 568 597 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 674 709 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 747 776 IPR002110 GO:0005515
Apr5g0919 1612 SMART ANK_2a 499 529 IPR002110 GO:0005515
Apr5g0919 1612 ProSiteProfiles Ankyrin repeat profile. 499 532 IPR002110 GO:0005515
Apr5g0919 1612 Pfam Ankyrin repeats (3 copies) 574 647 IPR002110 GO:0005515
Apr5g0919 1612 Pfam Ankyrin repeats (3 copies) 461 561 IPR002110 GO:0005515
Apr5g0919 1612 ProSiteProfiles Ankyrin repeat profile. 568 600 IPR002110 GO:0005515
Apr5g0919 1612 ProSiteProfiles Zinc finger RING-type profile. 12 58 IPR001841 -
Apr5g0919 1612 ProSiteProfiles Ankyrin repeat profile. 747 779 IPR002110 GO:0005515
Apr5g0919 1612 CDD RING-HC_ScPSH1_like 11 58 - -
Apr5g0919 1612 ProSitePatterns Zinc finger RING-type signature. 31 40 IPR017907 -
Apr5g0919 1612 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 6 1611 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Apr5g0919 1612 Gene3D Transferase(Phosphotransferase) domain 1 108 417 - -
Apr5g0919 1612 SUPERFAMILY RING/U-box 11 62 - -
Apr5g0919 1612 SUPERFAMILY Protein kinase-like (PK-like) 149 419 IPR011009 -
Apr5g0919 1612 Pfam Ankyrin repeats (many copies) 751 789 IPR002110 GO:0005515
Apr5g0919 1612 Pfam Ankyrin repeats (many copies) 677 733 IPR002110 GO:0005515
Apr5g0919 1612 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 89 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0919 Apr-Chr5 13539321 13557740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0919 124 424 MAP Kinase Kinase Kinase AT1G63700 27.010 7.39e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Apr5g0919 Pkinase 1.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0919 K16279 - gmx:100783181 2815.02