LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g0916	ATGGGATTGAGAAACCTGAGCGTATTTGTGCTTTTTATTAAAGAAGGATGGGAAAAAGCGTTCTCTGTTGCAAAGTACCTCTGTTTTCTACATGTTACCAATGCCTATGTGGTCACCCCTGTTCTTACCTATGGTCCTAGCATGCTTCCTACATTTGATTTGACAGAGAGCTTGTTTCTTGGTGAAAGGATATCAACCCGATTTGGTAAAGTTGCTCGTGGAGATATTATAATCTTACGGTCTCCTCAATGCCCTAGAAAGTATATGACGAAACGGTTGGTTGGGATGGAGGGTGATACTGTTACATACCTTTCTAATCCTAAGGACAACGATAAGCATGAGACAGTTGTGGTTCCAAAAGGTCACGTTTGGGTACAGGGAGATAATATCTATAAGAGTAAGGATTCAAGAAATTTTGGTCCTGTTCCTTATGGTCTTATTGAGAGCAAGATGTGCTGGAGGGTATGGCCACTTAAAAATTTTGGACCTGTCTAG	495	0.4101	MGLRNLSVFVLFIKEGWEKAFSVAKYLCFLHVTNAYVVTPVLTYGPSMLPTFDLTESLFLGERISTRFGKVARGDIIILRSPQCPRKYMTKRLVGMEGDTVTYLSNPKDNDKHETVVVPKGHVWVQGDNIYKSKDSRNFGPVPYGLIESKMCWRVWPLKNFGPV*	165

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g0916	164	PANTHER	PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED	1	163	-	-
	Apr5g0916	164	SUPERFAMILY	LexA/Signal peptidase	36	164	IPR036286	-
	Apr5g0916	164	PANTHER	PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN	1	163	-	-
	Apr5g0916	164	CDD	S26_SPase_I	40	150	IPR019533	GO:0004252\|GO:0006465
	Apr5g0916	164	Pfam	Signal peptidase, peptidase S26	23	103	IPR019533	GO:0004252\|GO:0006465
	Apr5g0916	164	Pfam	Signal peptidase, peptidase S26	114	156	IPR019533	GO:0004252\|GO:0006465
	Apr5g0916	164	Gene3D	Umud Fragment, subunit A	33	162	-	-
	Apr5g0916	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	36	52	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Apr5g0916	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	89	101	IPR000223	GO:0006508\|GO:0008236\|GO:0016020
	Apr5g0916	164	PRINTS	Bacterial leader peptidase 1 (S26A) family signature	118	137	IPR000223	GO:0006508\|GO:0008236\|GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g0916	Apr-Chr5	13500617	13501650	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr5g0916	48	164	MADS-box Gene Family	AT1G29960	50.427	8.23e-44	139

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g0916	K09647		-	zju:107413489	224.172

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