Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr5g0916 | ATGGGATTGAGAAACCTGAGCGTATTTGTGCTTTTTATTAAAGAAGGATGGGAAAAAGCGTTCTCTGTTGCAAAGTACCTCTGTTTTCTACATGTTACCAATGCCTATGTGGTCACCCCTGTTCTTACCTATGGTCCTAGCATGCTTCCTACATTTGATTTGACAGAGAGCTTGTTTCTTGGTGAAAGGATATCAACCCGATTTGGTAAAGTTGCTCGTGGAGATATTATAATCTTACGGTCTCCTCAATGCCCTAGAAAGTATATGACGAAACGGTTGGTTGGGATGGAGGGTGATACTGTTACATACCTTTCTAATCCTAAGGACAACGATAAGCATGAGACAGTTGTGGTTCCAAAAGGTCACGTTTGGGTACAGGGAGATAATATCTATAAGAGTAAGGATTCAAGAAATTTTGGTCCTGTTCCTTATGGTCTTATTGAGAGCAAGATGTGCTGGAGGGTATGGCCACTTAAAAATTTTGGACCTGTCTAG | 495 | 0.4101 | MGLRNLSVFVLFIKEGWEKAFSVAKYLCFLHVTNAYVVTPVLTYGPSMLPTFDLTESLFLGERISTRFGKVARGDIIILRSPQCPRKYMTKRLVGMEGDTVTYLSNPKDNDKHETVVVPKGHVWVQGDNIYKSKDSRNFGPVPYGLIESKMCWRVWPLKNFGPV* | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr5g0916 | 164 | PANTHER | PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED | 1 | 163 | - | - | |
Apr5g0916 | 164 | SUPERFAMILY | LexA/Signal peptidase | 36 | 164 | IPR036286 | - | |
Apr5g0916 | 164 | PANTHER | PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN | 1 | 163 | - | - | |
Apr5g0916 | 164 | CDD | S26_SPase_I | 40 | 150 | IPR019533 | GO:0004252|GO:0006465 | |
Apr5g0916 | 164 | Pfam | Signal peptidase, peptidase S26 | 23 | 103 | IPR019533 | GO:0004252|GO:0006465 | |
Apr5g0916 | 164 | Pfam | Signal peptidase, peptidase S26 | 114 | 156 | IPR019533 | GO:0004252|GO:0006465 | |
Apr5g0916 | 164 | Gene3D | Umud Fragment, subunit A | 33 | 162 | - | - | |
Apr5g0916 | 164 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 36 | 52 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Apr5g0916 | 164 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 89 | 101 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Apr5g0916 | 164 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 118 | 137 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr5g0916 | Apr-Chr5 | 13500617 | 13501650 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr5g0916 | 48 | 164 | MADS-box Gene Family | AT1G29960 | 50.427 | 8.23e-44 | 139 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr5g0916 | K09647 | - | zju:107413489 | 224.172 |