Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0916 ATGGGATTGAGAAACCTGAGCGTATTTGTGCTTTTTATTAAAGAAGGATGGGAAAAAGCGTTCTCTGTTGCAAAGTACCTCTGTTTTCTACATGTTACCAATGCCTATGTGGTCACCCCTGTTCTTACCTATGGTCCTAGCATGCTTCCTACATTTGATTTGACAGAGAGCTTGTTTCTTGGTGAAAGGATATCAACCCGATTTGGTAAAGTTGCTCGTGGAGATATTATAATCTTACGGTCTCCTCAATGCCCTAGAAAGTATATGACGAAACGGTTGGTTGGGATGGAGGGTGATACTGTTACATACCTTTCTAATCCTAAGGACAACGATAAGCATGAGACAGTTGTGGTTCCAAAAGGTCACGTTTGGGTACAGGGAGATAATATCTATAAGAGTAAGGATTCAAGAAATTTTGGTCCTGTTCCTTATGGTCTTATTGAGAGCAAGATGTGCTGGAGGGTATGGCCACTTAAAAATTTTGGACCTGTCTAG 495 0.4101 MGLRNLSVFVLFIKEGWEKAFSVAKYLCFLHVTNAYVVTPVLTYGPSMLPTFDLTESLFLGERISTRFGKVARGDIIILRSPQCPRKYMTKRLVGMEGDTVTYLSNPKDNDKHETVVVPKGHVWVQGDNIYKSKDSRNFGPVPYGLIESKMCWRVWPLKNFGPV* 165
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0916 164 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 1 163 - -
Apr5g0916 164 SUPERFAMILY LexA/Signal peptidase 36 164 IPR036286 -
Apr5g0916 164 PANTHER PEPTIDASE S24/S26A/S26B/S26C FAMILY PROTEIN 1 163 - -
Apr5g0916 164 CDD S26_SPase_I 40 150 IPR019533 GO:0004252|GO:0006465
Apr5g0916 164 Pfam Signal peptidase, peptidase S26 23 103 IPR019533 GO:0004252|GO:0006465
Apr5g0916 164 Pfam Signal peptidase, peptidase S26 114 156 IPR019533 GO:0004252|GO:0006465
Apr5g0916 164 Gene3D Umud Fragment, subunit A 33 162 - -
Apr5g0916 164 PRINTS Bacterial leader peptidase 1 (S26A) family signature 36 52 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr5g0916 164 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Apr5g0916 164 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Apr5g0916 Apr-Chr5 13500617 13501650 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0916 48 164 MADS-box Gene Family AT1G29960 50.427 8.23e-44 139
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0916 K09647 - zju:107413489 224.172