Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0891 ATGGCATCCTCAAATTCACCATGTGCAGCATGCAAGTTCTTGCGCCGCAAATGCCAACCCGAGTGTGCATTTGCACCATACTTTCCACCTGACCAACCTCAAAAGTTTGCAAATGTTCATAGAATTTTCGGGGCAAGCAATGTCACAAAGCTTCTCAATGACTTGCACCCTCACCAACGTGAAGATGCGGTTAATTCCCTTGCTTATGAAGCTGAGATGAGACTCCGTGACCCTGTTTATGGTTGTGTAGGAGTCATATCACTCCTTCAACACCAACTTCGCCAGCTTCAAATGGACCTTTATTGTGCCAAATCAGAACTCTCTAGGTACCAAAATTTGAGCATCACCACCAACCATAGCCTCATTGCTTCTGAGTCTGCGGCCACAGCCTACCACCACCACCAGAACACGACCGGTAGTGGCCTTGGCCGTGACCATCACTATCACCATCACCACCACCATCAGTTCTTTCCAAGGGAACAATACCAACAACAAGTGGTTAGAAGCTTTGATGCAGGGAACAACTATGATGCAAGTCTCTTGGCCATGAACATATCAGCTAGCTTAGGGCAACTCAACCACCTTCAACATCAAAGTGCTGCCGGTGGCGGCGATGACCGCCGCACCGCCAACCGCTCCTAG 642 0.4907 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNHSLIASESAATAYHHHQNTTGSGLGRDHHYHHHHHHQFFPREQYQQQVVRSFDAGNNYDASLLAMNISASLGQLNHLQHQSAAGGGDDRRTANRS* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0891 213 MobiDBLite consensus disorder prediction 133 152 - -
Apr5g0891 213 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Apr5g0891 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 176 - -
Apr5g0891 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 176 - -
Apr5g0891 213 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0891 Apr-Chr5 13090108 13090749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0891 2 213 AS2 family AT1G65620 63.850 1.33e-80 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr5g0891 LOB 2.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0891 - - gmx:100806890 381.333