Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0856 ATGGAACAATCAAGATTCTACAAACAGCAACAATGCAATACCAAGGAACCTAGAAAACAGGAGTTCCTGCCTGGATCTCATTCAGTAATGCAGGACCATATGGATGGCATACATACTATTAGAAGACCATCTGAGTATAACAAATCCGATGTTAAACCAGTACTTAATTATTCAATACAAACAGGTGAGGAATTTGCTCTTGAATTTATGCGAGATAGGGTGAATCTCAGAAAGCCTGTGTTTTCAAATGCTAGTGATTCCAATTCCAATTATACAACTGGTTTTATGGAACTGAAAGGCGTTTTAGGCATCAGTCATGCAGCATCTGAAAGTGGGTCAGACATTTCTATGCCCACAAGGGCTGAGAAAGGTCCAACTGAGTTTAACAGACGGAGTGCATCTTTACATGGAGACAGAAACAATTATGGGTCTATTCGATCAATACCAAGAACTTCATTGAATCGGGAGGATAGTCGATTTGTACGTGGGTATGGCTCTTCTGTTGGTTCTGATAGCTCATCAATGATGATGAAGTGTCTCTGTAGCTTTGGTGGTAGAATATTACCACGACCAAGTGATGGAAAACTAAGGTATGTTGGAGGTCAAACTCGTATTCTTTGTATAAGAAAGGACATATCTTGGCAGGAGTTTATGCAGAAAGCTTTGTTAATCTATAATCTGGTTCGAGTATTAAAGTATCAACTTCCTGGGGAAGATCTTGATGCTTTGGTATCAGTATCATCTGATGAGGATTTGCAGAATATGATGGAGGAATGTAATCTTCTAGAAGATAGAGAACGCTCGCAAAAGCTTAGGTTATTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCAGTTTGCTCTCAGTAGCATCGATGATGATTCTGAGGTCCAATATGTTGTTGCTATTAATGGCATGGACTTGGGATCAAGAAACAACTCAACCCCACTTGGTGTTAACTTTTCAACAGATGATATACATGAATTTGACAGGCAAACTATGGAGAGGGGGACTAGTAGAGTTGCTGTAGAATCTGTAGGTGTCAGCAATGCTCCCTTGACTAACAAATCTGACTCTTCATTGACTATTCATTCTTCACAACCAGTTCTACCTACTTCTTCAAATGCTTATGAAACTGATCCACTGTCTTATGGTGACCAAATGATGCAAGTTGGGGAAACTAGTCATCACTATCTTGTTCACCATGGCCTAAATCCCATGCAGAACCCTGTGGTTGGAGAGACTCCTATTCCTATGGCTCCTCATCTGCTGAATAGTCAACAAGGAGTTCTGAATGAAGAATATTCTCCCAGTGGATTACAAATACAAAATTCTGAGTTAACTACAATGCAGGTGAAAAAGACAGGTGATAGTTCAGTTAAACAAGGGAGTGATCCAGTTACCATGCCTGAGGGGCATCTACCTTCATTGCCTGCAACCAAAGAGGTTCAGCACCAAGATTATGAAGAGGCCTCTTCTACATCTAGCAGTGCATTTGTTCCCCCTTATGTTGATTCCCACTCCAATGCAATTGATTTGAGTTGTCTTCATCCTCCTCCAGTTCCTAAAAGAGTTTACTATTCAGAAAGAACTCCGAGGGAGCAAGTAGAGTTGCTGAATCAGTCCTCAAAGTCAGATGACACTCACAGTTCTAAGATTCATGTGTCAGATTTACTTTCTGATGTCAACCAAGAGGATCCAGTAACAGGATCTGGTGACAGCTTGCATGATGGTAAAATGTTAAATCCAACTGAGGAATTGGGTATTACAGCAAAGCCCTTACTAGCAGCAGGCCATACCACTGAAAATGGGTTTTCCAAAAATCAATTGAGCAAACCATCACCAGATGCAAACAGTCTGATTAAGTCAAATCTATCAGAGCTCACAGATTCTGAATTGATGAAGCCGGTTTTACCAAGCAATGAAGGAACTGAAGATGTGGAAACTGAAAATTATCATAAAGATAACCACACCAAATCTTTGGTTGATGAAACTGAATCCAAAATCAAAACCAAAGATGGTAAATCAGATCTCCCTGCTTTGCATCATGTTTTATCTGATAACCATCTTGATGACCCAGCATCCAATCTTCCAGAGATTGATTGGGGTGAAGCCTCCGAGAAGGAATCTAGTGATAGTTGTATTGTTCACGAACTACCTGTTTCTTTAACAAGGAACATAACCAAGGATGTTTATCATGATTTCTCCCCAAATGTGGTTTCCAAACAAGCACAAGGTGACATTCTTATTGATATTGATGATCGATTTCCCCGTGAATTGCTTTCTGATATGTTTTCTAAAGCAATACTTGGAGAAGATTCCTCCAGTCTACATCCACTATCCACAGATGGAGTAGGCTTAAGCATAAATATGGAAAATCATGAACCTAAACGATGGTCATATTTTCAAAAGTTAGCTCTAGAAGGGCTTGATAATGTCTCTCTTATTGATCAGGATCATCTTGCTTTTTCACCTGTGATAGGAAAAGCAGGAGATAATCAAACTCATCTTGCTATGCCACTAACCACTGATGGAGTTCCTCTACATCATGAAGATTCCCACCTCAATTTTGGTGATGAAAATCATGAGGACTTGCATAGAAGAACTGGAACTGAAACCACTGTTTCAAAGTCCAATTATGATCCATCCCAACTCAAGGACTCAGAAAGCATGCAGTTTGATGCTATGATGGAAAATCTGCAAACACAAGAGTCAGAGTTTGAGGATGGCAAGTTTGATACCAAAAATAGCAATCTACCTCCGCTTGCATCTTTAGGAGATATTGATATCAGTACTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGATGCGAGAACTAGGTTCTGGTACATTTGGGACTGTGTATCATGGAAAATGGAGGGGAACAGATGTTGCTATTAAAAGAATAAAGAAGAGCTGCTTCACCGGCCGATCATCTGAGCAAGAGAGACTGACTGTAGAGTTCTGGCGGGAAGCAGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGCATGGACCAGGAGGAACGATGGCCACTGTTGCAGAATACATGGTGGATGGTTCTCTTAGGCGTGTATTACTTCACAAGGATAAGTATCTTGATCGCCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAATTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGGGATTTTGGCTTATCAAAAATTAAACGAAATACCTTGGTTACTGGGGGTGTGCGGGGGACTCTACCTTGGATGGCACCAGAGCTACTGAATGGCAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAAATTCTGACTGGTGAGGAGCCATATGCCAATATGCACTACGGTGCAATTATAGGCGGGATTGTAAATAACACATTAAGGCCAAACATCCCAAGTGACTGTGATCCTGAATGGAGAACACTGATGGAGCAATGTTGGGCACCCAATCCTGCAGCCAGACCATCCTTCACAGAAATTGCCAGTCGCTTGCGCACTATGTCTGCAGCAGCTAGCCAAACCAAAACACAAGGTCACAAGGCATCTAAATGA 3672 0.4082 MEQSRFYKQQQCNTKEPRKQEFLPGSHSVMQDHMDGIHTIRRPSEYNKSDVKPVLNYSIQTGEEFALEFMRDRVNLRKPVFSNASDSNSNYTTGFMELKGVLGISHAASESGSDISMPTRAEKGPTEFNRRSASLHGDRNNYGSIRSIPRTSLNREDSRFVRGYGSSVGSDSSSMMMKCLCSFGGRILPRPSDGKLRYVGGQTRILCIRKDISWQEFMQKALLIYNLVRVLKYQLPGEDLDALVSVSSDEDLQNMMEECNLLEDRERSQKLRLFLFSMSDLEDAQFALSSIDDDSEVQYVVAINGMDLGSRNNSTPLGVNFSTDDIHEFDRQTMERGTSRVAVESVGVSNAPLTNKSDSSLTIHSSQPVLPTSSNAYETDPLSYGDQMMQVGETSHHYLVHHGLNPMQNPVVGETPIPMAPHLLNSQQGVLNEEYSPSGLQIQNSELTTMQVKKTGDSSVKQGSDPVTMPEGHLPSLPATKEVQHQDYEEASSTSSSAFVPPYVDSHSNAIDLSCLHPPPVPKRVYYSERTPREQVELLNQSSKSDDTHSSKIHVSDLLSDVNQEDPVTGSGDSLHDGKMLNPTEELGITAKPLLAAGHTTENGFSKNQLSKPSPDANSLIKSNLSELTDSELMKPVLPSNEGTEDVETENYHKDNHTKSLVDETESKIKTKDGKSDLPALHHVLSDNHLDDPASNLPEIDWGEASEKESSDSCIVHELPVSLTRNITKDVYHDFSPNVVSKQAQGDILIDIDDRFPRELLSDMFSKAILGEDSSSLHPLSTDGVGLSINMENHEPKRWSYFQKLALEGLDNVSLIDQDHLAFSPVIGKAGDNQTHLAMPLTTDGVPLHHEDSHLNFGDENHEDLHRRTGTETTVSKSNYDPSQLKDSESMQFDAMMENLQTQESEFEDGKFDTKNSNLPPLASLGDIDISTVQVIKNEDLEEMRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQHGPGGTMATVAEYMVDGSLRRVLLHKDKYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPNIPSDCDPEWRTLMEQCWAPNPAARPSFTEIASRLRTMSAAASQTKTQGHKASK* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0856 1223 SUPERFAMILY Protein kinase-like (PK-like) 930 1203 IPR011009 -
Apr5g0856 1223 MobiDBLite consensus disorder prediction 109 148 - -
Apr5g0856 1223 PANTHER SERINE-THREONINE PROTEIN KINASE 96 1223 - -
Apr5g0856 1223 Gene3D Phosphorylase Kinase; domain 1 934 1028 - -
Apr5g0856 1223 Pfam Protein tyrosine and serine/threonine kinase 942 1204 IPR001245 GO:0004672|GO:0006468
Apr5g0856 1223 SMART PB1_new 191 278 IPR000270 GO:0005515
Apr5g0856 1223 MobiDBLite consensus disorder prediction 1 17 - -
Apr5g0856 1223 MobiDBLite consensus disorder prediction 646 674 - -
Apr5g0856 1223 ProSitePatterns Protein kinases ATP-binding region signature. 947 972 IPR017441 GO:0005524
Apr5g0856 1223 CDD PB1_UP2 180 276 - -
Apr5g0856 1223 Gene3D - 195 278 - -
Apr5g0856 1223 MobiDBLite consensus disorder prediction 627 674 - -
Apr5g0856 1223 SUPERFAMILY CAD & PB1 domains 192 280 - -
Apr5g0856 1223 SMART serkin_6 941 1210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0856 1223 ProSiteProfiles Protein kinase domain profile. 941 1207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0856 1223 Gene3D Transferase(Phosphotransferase) domain 1 1029 1223 - -
Apr5g0856 1223 MobiDBLite consensus disorder prediction 1 28 - -
Apr5g0856 1223 MobiDBLite consensus disorder prediction 452 477 - -
Apr5g0856 1223 MobiDBLite consensus disorder prediction 601 620 - -
Apr5g0856 1223 PANTHER - 96 1223 - -
Apr5g0856 1223 PRINTS Tyrosine kinase catalytic domain signature 1023 1036 IPR001245 GO:0004672|GO:0006468
Apr5g0856 1223 PRINTS Tyrosine kinase catalytic domain signature 1060 1078 IPR001245 GO:0004672|GO:0006468
Apr5g0856 1223 PRINTS Tyrosine kinase catalytic domain signature 1131 1153 IPR001245 GO:0004672|GO:0006468
Apr5g0856 1223 PRINTS Tyrosine kinase catalytic domain signature 1175 1197 IPR001245 GO:0004672|GO:0006468
Apr5g0856 1223 CDD STKc_MAP3K-like 947 1204 - -
Apr5g0856 1223 Pfam PB1 domain 193 276 IPR000270 GO:0005515
Apr5g0856 1223 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1066 1078 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0856 Apr-Chr5 12530821 12546939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0856 1 1133 MAP Kinase Kinase Kinase AT1G79570 41.859 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Apr5g0856 PK_Tyr_Ser-Thr 3.2e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0856 - - gmx:100817937 2005.72