Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0825 ATGGCCTTTATTCCTCAGTTCTATTCAAACTACACATTCCCTATTGATCTCACAGCTCTAGTGGTGCCTCCTCTCACTGACAATTCCTCAGTTTTGGGCAATCCAATCATGTGGGCTCAAGATAACAGCTTCAGCACTCCTGTTCATCATAATGGGGCACTTGATTGTCATCTTGTGGATTCCATGCCTTCTTCTGCTTGGCTGCCATCTTTCTCAGAGCAAAATGGGAGTGTTTCAGAATACAAAGTGGGCTTCTATGGTGCCATTGCTGGGTTTCAGAATTTTAGTGATGGATGCCACTCTCAATTTGCTGATTTTGAAGAGGATATTAAGCCACCTGCTTATTCTAATACTGCCACCGAAAACTGGGGACTTGAAGGTAATCAAGCGCCAGCTGGTGAAGAACCTAACATAAAGGTAGAAAGATACTCAGAAGAAGAAAGGAAGGAAAGAATTCTACGATATTTGAAGAAAAGAAATCAAAGGAACTTTAACAAAACCATCAAGTATGCATGTCGAAAAACCTTGGCTGATCGGCGGGTAAGAGTTAGGGGAAGGTTTGCAAGAAACAATGAACTCTCCGAGGAAGACATGGCAAGGAAAAAGCATGAGAATAATCACAAAGAGGACTTTTATGGTGATGATTCAATCCAGTTACAGTTACAGAATGATGATGACGATTGGCTGCAAGAGGCCATGGACTCAATAGAAAACCATGTTCAGCATATAAAGTCAATTCTTATATGCTAA 750 0.412 MAFIPQFYSNYTFPIDLTALVVPPLTDNSSVLGNPIMWAQDNSFSTPVHHNGALDCHLVDSMPSSAWLPSFSEQNGSVSEYKVGFYGAIAGFQNFSDGCHSQFADFEEDIKPPAYSNTATENWGLEGNQAPAGEEPNIKVERYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNELSEEDMARKKHENNHKEDFYGDDSIQLQLQNDDDDWLQEAMDSIENHVQHIKSILIC* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0825 249 PANTHER ACTIVATOR OF SPOMIN::LUC2 1 236 - -
Apr5g0825 249 Pfam CCT motif 148 190 IPR010402 GO:0005515
Apr5g0825 249 ProSiteProfiles CCT domain profile. 148 190 IPR010402 GO:0005515
Apr5g0825 249 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0825 Apr-Chr5 11931342 11933321 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0825 127 197 C2C2-CO-like Transcription Factor Family AT5G24930 38.889 3.61e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr5g0825 CCT 7.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0825 - - vra:106761508 275.404