Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0807 ATGGCAGATTCAACCCCTCTTCTGAGTTCAAAGTCAGAGGCAGAAGAAGCACAGCCAGGAAAAGAAGACGATCCTTCTCTGGCCTCCACCATCGAAATTTGCATAGGCGAATTCAATTGGCACCAGTTCTTGCAATCCGTTCTTGTCTCCTTCGCTTGGATCTTCGATGCTCAACAAACCTTCATCACCGTCTTCACCGACGCGCAACCACCTTGGCGCTGCACCCAACAAGGCGCCACACCATGCACCGCAGATAGCAACATATGCAGCCTTCCGAGGGATTCGTGGGCCTGGAATGGGCCCTCAGAAGCCTCCATTGTTTCAGAGTGGGCCTTGGAGTGTGAGAATTCCATCATAACGGGCCTCCCTGCTTCGTTTTTCTTTGTTGGGTGCTTAGTGGGTGGGCTTCTGCTGGCCACGCTTGCTGACTCATCGCTTGGGCGCAAGAACATGCTCCTTTACTCATGTCTCATGATGTCTCTCTCTTCCTTCCTCGTCACCTTCTCTACCAATGTTTGGATCTACTCAGCTCTCAAGTTTCTAATTGGATTTAGCCGAGCCACCATCGGAACCTCAGCTCTTGTGCTAGCTTCGGAGCTCGTTGGAAAACGCTGGCGTGGCCAGATTAGTGCCATTGGCTTCTTTTGTTTCACTGTAGGGTTCTTGTCCTTACCCGCCATGGCATACGCAAACAGGAATTCTTCGTGGAGAAACCTCTATCTGTGGACTTCTATTTCAACCATTTTCTATTGCATATTGGTCAAGTTGTTAGTTAGTGAGTCCCCTAGATGGCTTCTTGTGCGAGGAATGAAAGAAGAAGCCGTGGCTACTTTAAAATGCATCACATCAATCACGCAAAGTAACCTGAATTTGACCATCAATAGCATGTCCCACAAGGAAGAAACTTGGAACGAGAATTTCTTTTCGGCCCTCAAAATTTTGATGGAAAAGAAATGGTCTTCAAGAAGATTATTAGCGATTATGGCCATGGGAATTGGCATTGGATTGGTCTATTATGGCATGCCACTAGGCCTTGAAGTGTTATCCTTCGACCTTTATTTAAGTGTCACATTCAATGCCTTATCTGAGGTGCCATCAGCCTTGATCACCTTCTTTCTTATAGACAAGTTCAATAGGAGAAGTGCACTCCTCTTTTTCACTATCCTAAGTGGCATTTTTAGTGTAATGTCAATCATGGAAGGGAAGCTATGGACCAATTTGCAAATTTGGTTTGAGTTAGTATCCTTTTTCAGTGCTTGTGCTTCTTTTAACATTTACTTAATATACACCACAGAGTTGTTCCCAACTTGTGTGAGGAATTCAGCACTGTCAATGGCAAGGTTAGCGGTGGTATTTGGTGGCACGTTTAGTCCTTTGTTGGTGGGTGCTGGAAGAGGGAATAAGTTCTTATGCTATGGGGTTTTTGGGTTGGTGATAGGTTGTAGTGGGGTGTTTGGAATATTCCTGCCAGAGACAAAGGGGAGAGCACTGTGTGATACATTGGATGAAGAAGAAAACAAAGAGAAAACAGCTTCTGATATATTGGCTTAA 1551 0.4545 MADSTPLLSSKSEAEEAQPGKEDDPSLASTIEICIGEFNWHQFLQSVLVSFAWIFDAQQTFITVFTDAQPPWRCTQQGATPCTADSNICSLPRDSWAWNGPSEASIVSEWALECENSIITGLPASFFFVGCLVGGLLLATLADSSLGRKNMLLYSCLMMSLSSFLVTFSTNVWIYSALKFLIGFSRATIGTSALVLASELVGKRWRGQISAIGFFCFTVGFLSLPAMAYANRNSSWRNLYLWTSISTIFYCILVKLLVSESPRWLLVRGMKEEAVATLKCITSITQSNLNLTINSMSHKEETWNENFFSALKILMEKKWSSRRLLAIMAMGIGIGLVYYGMPLGLEVLSFDLYLSVTFNALSEVPSALITFFLIDKFNRRSALLFFTILSGIFSVMSIMEGKLWTNLQIWFELVSFFSACASFNIYLIYTTELFPTCVRNSALSMARLAVVFGGTFSPLLVGAGRGNKFLCYGVFGLVIGCSGVFGIFLPETKGRALCDTLDEEENKEKTASDILA* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0807 516 MobiDBLite consensus disorder prediction 1 25 - -
Apr5g0807 516 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 510 - -
Apr5g0807 516 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 3 22 510 - -
Apr5g0807 516 Pfam Sugar (and other) transporter 114 497 IPR005828 GO:0016021|GO:0022857|GO:0055085
Apr5g0807 516 Gene3D MFS general substrate transporter like domains 43 504 IPR036259 -
Apr5g0807 516 ProSiteProfiles Major facilitator superfamily (MFS) profile. 45 494 IPR020846 GO:0022857
Apr5g0807 516 SUPERFAMILY MFS general substrate transporter 117 497 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0807 Apr-Chr5 11608999 11611304 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0807 1 507 Organic Solute Cotransporters AT1G16390 60.234 0.0 604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0807 - - gmx:100812722 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0807 5 11608999 11611304 Apr5g0807 5 11608999 11611304 ECH