Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0797 ATGGACACGAATAACCCAATTGAGAATTCTTCCAATTCTGAATCTTTCATGTTCAATTCATCATCACACAGAAGTGCCATGTCCATTCAGTCTAGGAGTTCTGGTAGGAACTCAACCCGGGAAGTGACTTTTGGCCACTCAGGATCCAAGCCTGTGAGGTATGGCTCAAAGGGTGCTGATTCTGAAGCTCTCAGTATGTCTCAGAAGGAAATCAGGGATGAGGATGCAAGGTTAGTTTATGTTGATGATCATGAAAGGACAAATGAGAGGTTTGAATTTTCAGGGAATTCAATTCGTACTGGGAAGTACTCCATTTTCACCTTTCTTCCAAGGAACCTGTTTGAACAATTTCATAGAGTTGCTTACATTTACTTCCTTATAATTGCCATTCTTAATCAGCTCCCTCAGCTAGCTGTTTTTGGGAGGGGCGTTTCCATTTTGCCATTGGCCTTTGTGCTTCTTGTTACTGCTGTGAAGGATGCATATGAGGATTGGCGGAGGCACAGGTCAGACAAAGTTGAGAACAATAGGTTAGCATTGGTTTTGGTTAATGGTCAGTTCCAAGAGAAGAAGTGGAAGGATATTAGAGTTGGGGAGGTCATTAAAATCCAGGCAAATGAAACCATTCCTTGTGATATTGTGTTGCTATCAACTAGTGACCCTACTGGGGTTGCTTATGTTCAGACTCTTAATCTTGATGGAGAATCTAATTTGAAGACTAGGTATGCAAAACAAGAAACTCAATCCAAGTTGCCTGAAAAGGAGAGGTTTAATGGATTGATTAAGTGTGAGAAACCCAATAGGAATATCTATGGATTTCATGGTAACATGGAAATTGATGGAAAGAGGTTGTCTCTTGGATCCTCCAATATTCTTCTTAGAGGCTGTGAACTAAAGAATACTAATTGGGCACTTGCTGTAGCAGTGTATTGTGGCCCTGAGACCAAAGCTATGCTCAACAGCTCAGGAGCTCCATCAAAGAGGAGCCTTCTCGAGACTCGCATGAACTCTGAGATCATTATACTTTCTTTCTTTCTAGTAGCTTTGTGTACTGTCACCTCAGTTTGTGCTGCTGTTTGGTTAAAGCACCACAGGGACGAGTTAAATCTCTTGCCATATTATAGGAAACTGGATGTTTCTGAGGGCAAAGAAGAAAGCTATGAATATTATGGATGGGGATTGGAAATCCTTTTCACTTTCCTCATGTCAGTTATAGTGTACCAGGTCATGATCCCTATATCCTTGTACATTTCCATGGAGCTTGTCCGTGTTGGTCAAGCTTATTTCATGACCCGAGACTCCAGAATGTATGATAAGGCAACAAATTCAAGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTAGGTCAAATTAAATATGTCTTTTCTGACAAAACTGGTACACTGACTGAGAACAAGATGGAGTTCCAATGCGCAAGCATATTTGGAATTGATTACAGTTCTGCAAACACCAGTCTCGAGAATGAGCAAGTTGAATACTCTGTTCCAGTGGAAGGAATGATCTTGAAGCCAAAGATGAAGGTGAAAGTTAATCAAGAGCTTTTACATTTATCAAAAAGTGGTTTTCCAAGTAAAGAAGGAAAACATATTTATGATTTCTTTCTAGCACTGGCAGCCTGCAATACCATTGTGCCTCTTGTGGTTGACACATCTGACCCTATGGTCAAGCTGATTGATTATCAAGGGGAATCACCAGATGAACAAGCATTGGCTTTTGCCGCCGCTGCCTATGGTTTTATGCTTATTGAACGAACCTCAGGTCACATAATCATTGATATTCATGGGGAAAGACAAAGATTCAATGTCTTGGGTTTGCATGAATTTGATAGTGATCGGAAAAGGATGTCAGTTATATTGGGGTACAATGACAATTCTGTGAAAATTTTTGTTAAAGGGGCGGATTCATCCATGCTTAGTGTGATAGACAAATCATTGAACACAGATATACTTCAAGCAACTGAAACCCATCTTCAGTCTTATTCCTCGGTTGGTTTGAGGACGCTTGTTATTGGGATGCGGGACTTGAATGCTTCAGAATTTGAGCAATGGCACCTTTCCTTTGAGGCAGCAAGCACTTCTTTGATTGGTAGGGCTGGTATGCTTCGCAAGGTCGCTAACAATGTGGAGAACAATCTCTGCATATTGGGTGCAACTGCCATTGAAGACAAACTGCAGCAAGGAGTGCCAGAATCTATTGAGTCCCTAAGGACTGCAGGTATTAAAGTATGGGTGTTGACTGGGGACAAACAGGAAACTGCCATATCAATTGGATACTCCTCAAAGCTTCTAACAAGCAAAATGACTCAAATCATAATTAACAGCAACAATAGAGAATCATGCAGAAGACGTTTGCAAGACGCCCTTATCATGTCTAGAAAACACATGGCTGTGTCAGGGGTTACCCACAATGCTGAAGGAAGTTCTGATGCTGTTACAACTTCAATAGCCTTGATTATTGATGGTACCAGTCTTGTTTATATTCTTGATAGCGAGTTTGAAGAAGAGCTTTTTCAACTTGCAAGTAAATGTTCTGTTGTTCTCTGTTGCCGAGTGGCTCCACTACAGAAGGCTGGGATTGTCGCCCTTGTGAAGAATAGGACGGATGACATGACATTAGCCATTGGAGATGGTGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGAGTTGGCATCAGTGGACAGGAGGGTCGGCAAGCTGTAATGGCATCAGATTTTGCAATGGGGCAGTTTAGGTTTTTAGTTCCTCTTTTATTGATACATGGGCATTGGAATTACCAACGATTGGGTTACATGATAATATACAACTTTTACAGAAATGCTGTCATTGTCCTTATCCTGTTTTGGTATGTACTCTTCACTGCCTTCACTTTGACAACTGCTATAAACGAATGGAGCAGCATGTTGTATTCAATAATCTATACTTCATTTCCAACTATTGTTGTTGGTATACTTGACAAGGATCTTAGTAAAAGGACACTCCTAAAGTATCCTCAGCTTTATGGGGCAGGGCAGAGACATGAAGCCTACAACAAAAAGTTGTTTTGGCTGTTAATGGCCGATACTTTGTGGCAAAGCATCGCTGTCTTCTTTGCTCCCCTCTTTGCATATTGGGCAAGCACCATAGATATAGGAAGCATAGGAGATCTTTGGACTCTTTCGGTGGTGATTTTGGTTAATTTGCACTTGGCCATGGATGTCATCAGGTGGAATTGGCTTTCTCATGCAGCCATTTGGGGCTCTATCATTGCCACCTTCATTTGCGTCATGGTTATTGATGCTATACCTGCATTTCCTGGTTACTGGGCTTTCTTTCATGCTGCAGGAACTGGATTGTTCTGGTTATGTTTGCTCGGAACTGTGATAGCCGCGTTGCTTCCTCGTTTAGTGGTAAAATTTATTTATCAATATTATTTTCCCAATGACATTCAGATCTCAAGAGAAGCTGAGAAGTTTGGGAATCAAAGAATGCATGGAGATGGACAAATAGAAATGCATCCTATTTCAGATGCTCCACCAAGATGA 3552 0.4108 MDTNNPIENSSNSESFMFNSSSHRSAMSIQSRSSGRNSTREVTFGHSGSKPVRYGSKGADSEALSMSQKEIRDEDARLVYVDDHERTNERFEFSGNSIRTGKYSIFTFLPRNLFEQFHRVAYIYFLIIAILNQLPQLAVFGRGVSILPLAFVLLVTAVKDAYEDWRRHRSDKVENNRLALVLVNGQFQEKKWKDIRVGEVIKIQANETIPCDIVLLSTSDPTGVAYVQTLNLDGESNLKTRYAKQETQSKLPEKERFNGLIKCEKPNRNIYGFHGNMEIDGKRLSLGSSNILLRGCELKNTNWALAVAVYCGPETKAMLNSSGAPSKRSLLETRMNSEIIILSFFLVALCTVTSVCAAVWLKHHRDELNLLPYYRKLDVSEGKEESYEYYGWGLEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMTRDSRMYDKATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIFGIDYSSANTSLENEQVEYSVPVEGMILKPKMKVKVNQELLHLSKSGFPSKEGKHIYDFFLALAACNTIVPLVVDTSDPMVKLIDYQGESPDEQALAFAAAAYGFMLIERTSGHIIIDIHGERQRFNVLGLHEFDSDRKRMSVILGYNDNSVKIFVKGADSSMLSVIDKSLNTDILQATETHLQSYSSVGLRTLVIGMRDLNASEFEQWHLSFEAASTSLIGRAGMLRKVANNVENNLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTSKMTQIIINSNNRESCRRRLQDALIMSRKHMAVSGVTHNAEGSSDAVTTSIALIIDGTSLVYILDSEFEEELFQLASKCSVVLCCRVAPLQKAGIVALVKNRTDDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMIIYNFYRNAVIVLILFWYVLFTAFTLTTAINEWSSMLYSIIYTSFPTIVVGILDKDLSKRTLLKYPQLYGAGQRHEAYNKKLFWLLMADTLWQSIAVFFAPLFAYWASTIDIGSIGDLWTLSVVILVNLHLAMDVIRWNWLSHAAIWGSIIATFICVMVIDAIPAFPGYWAFFHAAGTGLFWLCLLGTVIAALLPRLVVKFIYQYYFPNDIQISREAEKFGNQRMHGDGQIEMHPISDAPPR* 1184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0797 1183 MobiDBLite consensus disorder prediction 1 67 - -
Apr5g0797 1183 SUPERFAMILY Calcium ATPase, transmembrane domain M 90 1149 IPR023298 -
Apr5g0797 1183 Pfam Phospholipid-translocating P-type ATPase C-terminal 910 1150 IPR032630 -
Apr5g0797 1183 Gene3D - 150 320 - -
Apr5g0797 1183 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 469 735 IPR023299 GO:0000166
Apr5g0797 1183 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 395 485 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0797 1183 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 144 249 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0797 1183 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 853 968 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Apr5g0797 1183 SFLD Haloacid Dehalogenase 447 933 - -
Apr5g0797 1183 SFLD p-type atpase 447 933 IPR044492 -
Apr5g0797 1183 SUPERFAMILY Calcium ATPase, transduction domain A 176 317 IPR008250 -
Apr5g0797 1183 MobiDBLite consensus disorder prediction 1 45 - -
Apr5g0797 1183 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 13 1183 - -
Apr5g0797 1183 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 13 1183 - -
Apr5g0797 1183 Pfam Cation transport ATPase (P-type) 572 647 - -
Apr5g0797 1183 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 93 1157 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Apr5g0797 1183 Pfam E1-E2 ATPase 179 419 - -
Apr5g0797 1183 Gene3D - 719 922 IPR023214 -
Apr5g0797 1183 PRINTS P-type cation-transporting ATPase superfamily signature 463 477 - -
Apr5g0797 1183 PRINTS P-type cation-transporting ATPase superfamily signature 882 901 - -
Apr5g0797 1183 CDD P-type_ATPase_APLT_Dnf-like 95 1042 - -
Apr5g0797 1183 ProSitePatterns E1-E2 ATPases phosphorylation site. 465 471 IPR018303 -
Apr5g0797 1183 Pfam Phospholipid-translocating ATPase N-terminal 79 144 IPR032631 -
Apr5g0797 1183 SUPERFAMILY HAD-like 450 923 IPR036412 -
Apr5g0797 1183 Gene3D - 562 701 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0797 Apr-Chr5 11470158 11476484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0797 23 1183 Primary Pumps ATPases AT5G04930 70.644 0.0 1736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0797 K14802 - gmx:100784988 2053.87