Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0779 ATGGACTCATCAAGTTCCACACTCTTGCTTCTTGTGCTCACACTAGTCACAATTATGCTTCTTAAAACCATGCTTGGAAAAAAGCATAAGAACAAGCGCAAAGCAAACTCAAACTCAAAGCTTCCACCAGGACCAACTCCTCTTCCAATAATAGGCAACCTGCTAGAGCTAGGAAACAACCCCCACCACTCCCTCGCCCAACTCTCCAACATACACGGCCCAATAATGACCCTTAAATTGGGCCGAGTAACCACCGTAGTAGTATCCTCCGCTGACGTGGCAAGAGAAGTGCTCCAAACGCACGATCACGTTCTCTCTAACAGAACTGTCCCTGACGCCTTAACAGTCCTCAACCACGACCAGTACAGCCTGTCGTTTATGCGCGTGTCGCCGCGGTGGCGCGACCTCAGAAAAATCTGCAACAACCAACTGTTCGCTAACAAAACGCTGGAAGCGAGCCAGCCGCTGAGGCGGAAGAAGCTGCAGGACCTCCTAATCGACATCGGAAAGTGCAGTGAAGTTGGCGAAGCGGTGGACATCGGAAGAGCGGCTTTTAAGACTACAATTAACTTGTTGTCAAACACTTTTTTCTCTGTAGATTTTGTAGGGTCCGCGGAAGAGGCTGGGGAGTATAAGGAGATCGTTGTGAGTATTTTGAAGGAGGTTGGGGCACCCAACTTGTCTGATTTTTTCCCTTCTCTGAGGGTCTTTGACCTTCAAGGGATTCGGAGGCGTTCCGTTGTTGAGGTTAAGAAGGTTTTGAGTATCTTTCGGAGGTTCGTTGGGGAGAGGGTTATAACCAGGGAAAGAGAGGGTGCCGTTGGGAATGACGATGTTCTTGATGCTTTGCTTAATATCTCTCTCGATAATGGCAAGATAGAGATGGATAAAGACGAGATTGAACACTTGCTTCTGAACATATTTGTGGCGGGAACGGACACAACAACATATACACTAGAATGGGCAATGGCAGAGTTAATTCAGAATTCAAAGATAATGTCAAAAGTGGAGAAGGAGCTTGAGCAAGTAATTGGGAAAGGAAAACCTGTGGAAGAAACAGATGTTGCTAGGCTTCCTTACTTACAAGCAGTCATAAAAGAGACCTTCCGTTTGCATCCACCAGTTCCATTGTTGCTTCCTAGAAAGGCTGAGATAGATGTAGAAATTGGTGGCTACATCATCCCAAAAGATGCACAAGTTTTGGTCAATGCATGGGCTATTGGTAGGGATCCAACTAAATGGGAAAACCCATATGTGTTTCTTCCAGAGAGATTTTTGGACTCTGAAACTGACATTAAAGGGCACCACTTTGAGCTCATACCATTTGGATCTGGAAGAAGAATTTGCCCTGGCTTGCCATTGGCTATTAGAATGTTGCCTTTGATGTTGGGATCATTGGTCAATTGCTTTAATTGGAAACTTCAAGATGGCATAAAGCTTGATGACTTGGACAAGGAAGATGAATATGGAATTACCTTGGAAAAATCTCAACCAGTTCGAATTGTTCCAATCAAACTAAGCAACCCTAGCAATTAG 1536 0.4518 MDSSSSTLLLLVLTLVTIMLLKTMLGKKHKNKRKANSNSKLPPGPTPLPIIGNLLELGNNPHHSLAQLSNIHGPIMTLKLGRVTTVVVSSADVAREVLQTHDHVLSNRTVPDALTVLNHDQYSLSFMRVSPRWRDLRKICNNQLFANKTLEASQPLRRKKLQDLLIDIGKCSEVGEAVDIGRAAFKTTINLLSNTFFSVDFVGSAEEAGEYKEIVVSILKEVGAPNLSDFFPSLRVFDLQGIRRRSVVEVKKVLSIFRRFVGERVITREREGAVGNDDVLDALLNISLDNGKIEMDKDEIEHLLLNIFVAGTDTTTYTLEWAMAELIQNSKIMSKVEKELEQVIGKGKPVEETDVARLPYLQAVIKETFRLHPPVPLLLPRKAEIDVEIGGYIIPKDAQVLVNAWAIGRDPTKWENPYVFLPERFLDSETDIKGHHFELIPFGSGRRICPGLPLAIRMLPLMLGSLVNCFNWKLQDGIKLDDLDKEDEYGITLEKSQPVRIVPIKLSNPSN* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0779 511 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 507 - -
Apr5g0779 511 MobiDBLite consensus disorder prediction 27 46 - -
Apr5g0779 511 Pfam Cytochrome P450 42 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Apr5g0779 511 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr5g0779 511 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 507 - -
Apr5g0779 511 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0779 Apr-Chr5 11087224 11089512 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0779 1 505 Cytochrome P450 AT2G45550 44.618 1.91e-163 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0779 - K23810 gmx:100798291 588.956