Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0748 ATGGGCCAAGGTGAGCTTATGCCTGGGAACAAGTATAACGGTAACTCAAACCACATTCCGGGTCGTGTAGAGCGGCTTCTGAGAGTGAGAGAATTGAGGAAGAGTAGCAGGGCATGCCATTTGAATGAGTTAGGGGAGAATAATAGCAATAGGATTGGGGTTGGTGCAGAGGGTGGTTGTGAGGAGCAGGTGCGGTTGAGAGAAGAGGAGAAATTGGGTGAAGTGGTTGGTGAAGGGGTTGGAGAAGGGTGTGAGAGGGAAGATGGGAAGGGTTTTAGACAGAGGCTATTGGTTGTGGCTAATAGGTTGCCTGTGTCGGCAGTTAGAAAAGGCGAGGATTCATGGTCTTTGGAGATAAGTGCCGGTGGCCTCGTCAGCGCTCTGTTAGGTGTGAAGGAGTTTGAGGCAAGATGGATAGGATGGGCCGGTGTCAACGTGCCAGATGAGATTGGACAGAAGGCACTTACTAAAGCCTTGGCTGAAAAGAGGTGTATCCCTGTATTTCTTGATGAGGAGATTGTTCATCAATATTATAATGGCTATTGCAACAACATCTTATGGCCCCTATTCCATTACCTTGGCCTACCACAAGAAGACCGCCTTGCCACCACACGTAGTTTCCAGTCTCAGTTTGAGGCATACGAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTCCTTCCCAAATGTTTAAAGAATCATAACAAAAAAATGAAAGTTGGGTGGTTTCTCCACACCCCATTTCCATCTTCTGAAATTCACAGGACACTGCCATCTCGTTCAGAGCTCCTGCATTCTGTTCTTGCTGCTGATTTAGTTGGTTTTCACACTTACGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGAATACTTGGACTTGAGGGTACTCCTTATGGGGTTGAGTATCAAGGGAAGCTCACTCGAGTTGCTGCATTTCCAATTGGGATAGACTCAGAACGATTTATACGTGCTCTTGACCTTCCTCCGGTACAAGATCACATCAAAGAGTTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTGGACATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAGAAATTTTTGGAAGAAAATGCTTATTGGCGTGATAAAGTCGTTCTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCAGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTCGGTCGCATCAATGGCAGATTTGGATCATTGACTACTGTTCCTATACATCACCTGGATCGCTCACTTGACTTTCATGCCCTATGTGCTTTGTATGCTGTTACTGATGTAGCACTAGTAACCTCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTGGCCTGCCAAGAGGAAAAGAAAGGAGTTCTCATTCTTAGTGAATTTGCCGGTGCAGCACAGTCTCTTGGTGCTGGAGCAATTCTTGTTAACCCTTGGAACATTACAGAAGTTGCTGCTGCAATTGCTAGAGCTCTGAATATGCCATCTGCAGAAAGAGAAAAGAGACATAAACATAATTTTCTTCACGTTAAATCACACACTGCTCAAGAATGGGCAGGAACTTTTGTGAGTGAACTAAATGATACTGTTATCGAGGCACAACTAAGGACAAGAGAAGGTCCACCCCGGCTTACAACTGAGACTGCAATTGAACATTATCTGCAGTCGACTAATCGATTGCTCATTTTGGGATTCAGTGGAACTTTAACTGAACCAGTTGAGAAAACAGGTGATCAGATTAAAGAAATGGAGCTTAAGAACTTCAAAGAATATGACATGTGGTTGGCAGCAGAGAATGGAATGTTTTTACTTCCTTCAAAGGGTGAATGGATGACAACAATGCCAGAGCATCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCTCGGTCACATTTTGATTTTGAAGAAAGGGAAACTTCGCTTGTATGGAATTACAAATATGCAGATGTTGAATTTGGGAGACTTCAAGCAAGGGACATGCTGCAGCATCTGTGGACAGGTCCAATTTCTAATGCTTCAGTTGAAGTTGTTCAAGGTAGCCGATCTGTTGAGGTGCGAGCTGTTGGTGTTACAAAGGGAGCAGCTATTGACCGCATTTTGGGTGAGATAGTGCACAGTAAATCCATGACGTCACCAATAGATTATGTTCTTTGCATTGGACATTTCCTGGGGAAGGATGAAGATATTTATTCATTTTTTGAGCCAGATCTTCCTTCTATTGGGGTGGGTCTTCCACGAAGTAAGGTAACAACGGAAGGGGTCAAGTTTCCGGTTGAGAAGAAACAATGTATGAAGATCCCACCCAGCAAAAGTGGATCAAAGCCATCTCAAAATAAGGCACAACGTCAAGTTTCAAATTCTGATAAGAAAACAAATAATAACTATGTCTTCAGTGCATCTCGCAAGCCATCTCCTGAAAAGGCATCATCATGGAACGTTCTTGACCTTAAGAAAGAGAACTACTTCTCATGTGCTGTTGGACGAACCCGAACAAATGCTCGCTACACGCTCGATTCTTCAGACGACGTCGTTTCATTTCTCAAGAAACTAGCAGATGCTTCTTTACCGCAGCGTTAA 2706 0.4313 MGQGELMPGNKYNGNSNHIPGRVERLLRVRELRKSSRACHLNELGENNSNRIGVGAEGGCEEQVRLREEEKLGEVVGEGVGEGCEREDGKGFRQRLLVVANRLPVSAVRKGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYEKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKNHNKKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPPVQDHIKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGSLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEEKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIARALNMPSAEREKRHKHNFLHVKSHTAQEWAGTFVSELNDTVIEAQLRTREGPPRLTTETAIEHYLQSTNRLLILGFSGTLTEPVEKTGDQIKEMELKNFKEYDMWLAAENGMFLLPSKGEWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDIYSFFEPDLPSIGVGLPRSKVTTEGVKFPVEKKQCMKIPPSKSGSKPSQNKAQRQVSNSDKKTNNNYVFSASRKPSPEKASSWNVLDLKKENYFSCAVGRTRTNARYTLDSSDDVVSFLKKLADASLPQR* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0748 901 Pfam Trehalose-phosphatase 610 784 IPR003337 GO:0003824|GO:0005992
Apr5g0748 901 SUPERFAMILY HAD-like 592 894 IPR036412 -
Apr5g0748 901 Gene3D - 649 731 - -
Apr5g0748 901 MobiDBLite consensus disorder prediction 812 850 - -
Apr5g0748 901 CDD GT20_TPS 95 560 IPR001830 GO:0003824|GO:0005992
Apr5g0748 901 Gene3D Glycogen Phosphorylase B; 87 341 - -
Apr5g0748 901 Gene3D - 617 786 IPR023214 -
Apr5g0748 901 Pfam Glycosyltransferase family 20 95 560 IPR001830 GO:0003824|GO:0005992
Apr5g0748 901 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 45 618 - -
Apr5g0748 901 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 619 894 - -
Apr5g0748 901 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 95 560 IPR012766 GO:0003825|GO:0005992
Apr5g0748 901 MobiDBLite consensus disorder prediction 807 853 - -
Apr5g0748 901 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 45 618 IPR001830 GO:0003824|GO:0005992
Apr5g0748 901 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 619 894 IPR001830 GO:0003824|GO:0005992
Apr5g0748 901 Gene3D Glycogen Phosphorylase B; 342 545 - -
Apr5g0748 901 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 94 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0748 Apr-Chr5 10399021 10420319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0748 7 897 Trehalose Biosynthesis Gene Families AT1G78580 74.737 0.0 1393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0748 K16055 - gmx:100797320 1551.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr2g0500 2 5793141 5812789 Apr5g0748 5 10399021 10420319 ECH
Apr5g0748 5 10399021 10420319 Apr5g0748 5 10399021 10420319 ECH