Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0740 ATGTTACCACCTTCAAAAGGGGAGTTTAAAGATATTTATGTGGTCTTTGAGCTCATGGAATCTGATCTCCACCAAGTGATCAAAGCTAATGATGACTTGACCCATGAACATCATCAGTTTTTTCTTTATCAGATGCTGCGAGCGTTGAAGTATATGCATACAGCTAATGTGTATCACAGAGATCTTAAGCCCAGAAACATATTGGCAAACGCAAATTGCAAACTCAAAGTTTGTGATCTTGGATTGGCAAGAGTTTCATTCAATGATACCCCAACAACATTATTTTGGACAGACTATGTGGCTACAAGATGGTACAGAGCCCCAGAATTGTGTGGATCATTTTTTTCTAAGTATACACCGGCAATTGATATATGGAGCATTGGATGCATTTTTGCTGAGTTGCTGCTAGGAAAGCCATTGTTTCCTGGCAAAACTGTTGTGCATCAATTAGATTTGATTACTAATCTTCTTGGGACACCATCAATTGAAACTATTACAGGAGTTCAAAATAATAATGCAAGGAAGTACTTGATGAAAATGCAAAAGAAAAAACCTATGCCATTTGAACATAAATTTCCAAATGCTGATCCATTGGCACTTTGTCTTTTGCAAAGGCTTCTAGCATTCAATCCAAATGATAGGCCAACAGCAGAAGAGGCATTGGCTGATCCTTACTTTAAGGGCTTGGCAAAAGTTGAGAGAGAACCTTCATGTAAACCAATTTCAAAATTAGAATTTGAATTCGAGAGGAGACGAATGCAAAAGGAGGATGTTAAAGAATTAGTATATCGAGAAATATTGGAATATCATCCTCAATTGCTTAAAGATTATATAAATGGAACTGGAGGCACAAACTTTCGATATCCCAGTGAAATAGATCAATTCAGAAAGCAATCTTCTTATTTTGAGGAAAATCATGGTAAAAGTGGACCAATGATTCCTCCAGAAAGGAAGCATGTCTCTCTTCCAAGGTCTACTATTCATTCTAATACGATTCCTCCTAGCACCCAGTCGACCTTTGTTTTGCATGAGAATAGTTTGAGAGAAGAAAGATCAAATATTGGAACTCAATTAAGTGTTTTACAACCTCCACCACAGATGCTAGCAGCTAAACCAGGGAGAGTTGTAGGGCCAATTTTTCACTATGAAGATGATCAGAGAAACATAAAAAATACAAATGATCCAAGGATTATTTACCAAAGTAATTCTCAAGCAATCTCTTCACAATATTTCTTTAGGGATCATACCCCAAACCCAAAGACTACATTAGATATACTCGAGGATTTTTCATACGTCAAGAACCGACTCCCATGCCAAAAATCCAACAGATCAACTAATGATTTCAACACGAACCTATACTATCGGCAAGGTGAGAACAATCATTTACATAAGCGTGTAACATCTTTTGATGCTAAACTACTGCAGGCACAATCATAA 1437 0.3695 MLPPSKGEFKDIYVVFELMESDLHQVIKANDDLTHEHHQFFLYQMLRALKYMHTANVYHRDLKPRNILANANCKLKVCDLGLARVSFNDTPTTLFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLLGKPLFPGKTVVHQLDLITNLLGTPSIETITGVQNNNARKYLMKMQKKKPMPFEHKFPNADPLALCLLQRLLAFNPNDRPTAEEALADPYFKGLAKVEREPSCKPISKLEFEFERRRMQKEDVKELVYREILEYHPQLLKDYINGTGGTNFRYPSEIDQFRKQSSYFEENHGKSGPMIPPERKHVSLPRSTIHSNTIPPSTQSTFVLHENSLREERSNIGTQLSVLQPPPQMLAAKPGRVVGPIFHYEDDQRNIKNTNDPRIIYQSNSQAISSQYFFRDHTPNPKTTLDILEDFSYVKNRLPCQKSNRSTNDFNTNLYYRQGENNHLHKRVTSFDAKLLQAQS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0740 478 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0740 478 Pfam Protein kinase domain 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0740 478 Gene3D Phosphorylase Kinase; domain 1 1 272 - -
Apr5g0740 478 Gene3D Transferase(Phosphotransferase) domain 1 21 249 - -
Apr5g0740 478 SUPERFAMILY Protein kinase-like (PK-like) 9 230 IPR011009 -
Apr5g0740 478 SMART serkin_6 6 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0740 478 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 1 359 - -
Apr5g0740 478 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0740 Apr-Chr5 10257490 10263147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0740 1 478 MAP Kinase Gene Family AT1G53510 60.437 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Apr5g0740 Pkinase 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0740 - K04371 gmx:100800878 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0740 5 10257490 10263147 Apr5g0740 5 10257490 10263147 ECH