Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0721 ATGGCATCCAATAACCCCTATGAGATCATGGACGATGAGGGCTTTGATTGGGAAGCTGCTGCCAGAGAAATCGACGTAGTTTGCCAAATGACCAGTGACGCAAAGGAAAAGGGAAAGGTTTCTGAGAAGAGAAAGCAATCCACTCTCGATACGTTCGTGTCTATTGCCAATGCCAAGAAGGAAACTCCAACCCCGCAATTCCAAGAAGACGATGAAGGATCTACCTTCTTCCACCACATTGACACGGAGGCAGCCAAAACTTGGATATATCCAATCAATGTTCCTCTCCGTGACTACCAATTTCATATTACTCAGTCTGCACTCTTTTCAAACACATTGGTGACCTTGCCCACAGGACTAGGCAAAACTCTCATTGCAGCCGTTGTTATGTATAACTACTTCAGATGGTTTCCTCAAGGAAAAATAGTCTTTGCTGCTCCTTCTCGACCACTTGTCATGCAGCAGATAGAAGCATGCCATAATATTGAATGGACAGTTGATATGACTGGTCAACTAAGTCCTCCCAAAAGAGCTCAATTTTGGAAAACAAAGCGAGTTTTCTTTGTCACTCCACAAGTGTTGGAAAAGGATATTCATTCCGGTACATGTTTGGTGAAGTACTTGGTATGTTTGGTGGTTGATGAAGCTCATAGAGCAATGGGAAATTACTCTTATTGTGAAGCAGTTCGTGAGTTAATGGCTGTACCAGTGCAGCTGAGAATATTGGCGTTAACTGCAACACCTGGTGCAAAGAAGCAGACCGTCCAGGCTGTCATTGATAATCTGCAAATCTCAAAGCTCGAATATCGTAGTGAAACTGACCATGACGTTATCTCATATGTTCATAATAGGAGGGTAGAGTTAATACAGGTTGCAATGGGCCAAGATGCTGTAGAAATAAACAGTAAGTTTATGGAAGTAATACGCCCTATAGTAGCTAAGCTTACAAATATTGGTGTCATTCAGAATAGAGATTACCGCACTTTGAGCCCTTGTGTATTGCTTGAGATAAGGGAAAAGTTTCGTCAGGGGCCTAGACAAGATCTTTCTCATGTCAATTATGAAGATGTTGAAGGGTATTTTGGAGTTCTTATTACTCTTTATTACATCCATAAGCTGCTTTCAAGTCATGGAATAAGGCCAGCATATGAGATGCTTGAAAGAAAACTGAAGCAAGGGTATTTTGCAAAATTTATGAGTAAAAATGAAGTTATTGTGAAAGCAAGGCAACTGATGCAGCAAAGCTTGTCTCATGGAGCATCAAGTCCCAAGTTGTCGAAAATGCTAGAAGTATTACTGGAGCATTTCAAAACCAATGATCCTCAAAGTTCCAGGGTAATTATCTTCTCCAATTACAGAGAAAGTGTTAGGGATATAATGGATGCACTTGGAGGTATTGGGGAATTAGTCAAAGCTACCCAGTTTATTGGTCAAAGTTCAGGGAAAGCAATGAAAGGTCAGTCCCAAAAAGTTCAACAGGCTGTGCTGAAGAAATTTCGGTCTGGAGCCTACAATGTCATTGTTGCTACATCAATTGGCGAAGAAGGTCTTGATATCATGGAAGTTGATCTTGTCATATCTTTTGATGCTAATATTTCACCACTTAGAATGATTCAGCGAATGGGAAGAACTGGAAGAAAGCATGATGGACGAGTTGTAGTTTTAGCTTGTGAAGGGACAGAGTTGAAGGGCTACTTGCGAAAACAGACAAAGAGCAAGACTATAAGTAAACACATGCGAAATGGGGGAATAAATAGCTTTGACTTTCATCCTAGTCCCAGGATGATTCCCCACATCATTAAACCTGAAGTTCAATATGTTGAGCTGTCCATTGAGAAATTTATTCCTCGTCAAAAGAATGTTAAAGATGACCAACTTCACATTTCTCCATCAAAGGACAAACTCACTGTTGCTGAAAATGATTTACTTGAAGCATATTTTCATCCTACTGGGGAAAACAAATGTAGACTCTCTCTTATTGCCTTTCCCCACTTTCAGACATTTGCTTCTAGAGTGCATAAAGTGAAGCACTCCTGTCAAACATCGATGCTTATAGACATGATGCAGCGTTTACAGGGATCAGTATCATTTCAGGGAGACAGCAAAACTTCTTCACTTCAGGCAGGTCTGTGTTTAGAACATAGTAAGCCAATCGCTGTTACCAAGCTTGATAAAGCTAAAAAAGACAATGAACCATGCACAAGGCACACTATGGGAACGGATGTGATCTCTGTTAATTGTCTAGAGCTGGATTCTTGTCATTTAGAGATTCAGACCAAAGACTTTGTTGATCTAACACTACAAGATAGCATTTTATGTGACTTGGGTAAGCATCAAGAGGAAACATGTGAGGGTGATGAGACAATTCCTGAGACTCCACTTGCTAAGAGAAGCTTGTCAAATGGAGACAATGCTTATGAAATGGTAAATTTTGAGGAGATGGAGACCTCTTTGTTGGTTCCAGATGCATGCACTAATGGCATGAGAGATGAACAACTTAGTCCTCGTTTAACTAATTTTATTAGAAACGGTGTTGTTCCAGAGTCTCCCATTGCAGAAAGAGGTGGTTGTCTTCAAGGAAAATCAAGAAACAAGTCTGTCATACGAGACTTTATTTTGCCTGTTCATCTCCAGGAAGAACAGGATGTTGGTTCTTTAAGTTCTAGGGAAAATAAGAAGGCCATCATTGATAATGGCACCAGTAAGCAGGTCTGTACTTCCCCTGTTGTTAATGAAACTCAGTCACCTTTACTTGAGCTGAAAAATTGTGCTGTTAGAAGACGACGAATCTTCCTTTCTCCAACTGAGGAAGGCCATACTCATTTCACGGACCCTAGCTTCAGTGAAGAATCACATGCAGCTTGTGGTGAAATGTCTGTAAGCATTAAACCTGCACGCAAGTTTAAAAGGTTGCGGAAAGCTGAAGATACTGAAAGTAATATGAACCTGAAAAACAATAAGCTTTTTGCTTCAAGAGCAAACTTTCTCAAATCATCTTCTGCCTGCAATCCCGCACAACATGAGCATGGCCAAGGTAAAAGGAAATCGACACACAATGTGAGAGACTTCATTGAGGAGGAAGCTGAGGTATCTTCAGGTGCCTGTGTATCTAACGATGAAGATGACGATGATGGCAATTCATTGGACAGCTTCATAGATGACAGGACCAACCCTACAGCAGCCAGTCAGCCTGAAGCTTGTAGATTGGACATGATGGCAATTTACAGGCGTTCTTTACTCAGTCAAACACCGTGTAATGGACGGCTTGATTTTTCTTCCAACTTCAGTCCTGACCATGTCATTATGGAAGCCAGTATTAGTGAAAGTGGGGATTCTTCAGGCAAGACCGTGACTTATTTCCAGACAAAGCCAACCAATCAGTCAGCTAATAGGACTTCGGAATCTGTTTGTATCGACCAGATAACCTCAGAAGCACTACCTTCAACTTGTTCACCAACTGGAACCGGGACAGAGATAAGAAGTAGCAAACGAAGATTGGCATTTTATCATTCTGGGCGCTTCCCAAATATGAACCTTGAACGAGAATTTGCACTTCAATCAAAGAAAGAAATAGTGGATGCCGATACGACTACAGATATTCTATGTGATGATCAATTTTATAATGACCTTAATCTTGACGAGTTGGAGGCGCAAGCTACTTCTCTTCTTAAACGGAAATTAGATTTGTCAATTCAGAAGCAAGATACAGTGTCTCACACATCCAACCTTGATACTTTTAGGTCTCCATCATTTGACCTTGGGATATGA 3768 0.409 MASNNPYEIMDDEGFDWEAAAREIDVVCQMTSDAKEKGKVSEKRKQSTLDTFVSIANAKKETPTPQFQEDDEGSTFFHHIDTEAAKTWIYPINVPLRDYQFHITQSALFSNTLVTLPTGLGKTLIAAVVMYNYFRWFPQGKIVFAAPSRPLVMQQIEACHNIEWTVDMTGQLSPPKRAQFWKTKRVFFVTPQVLEKDIHSGTCLVKYLVCLVVDEAHRAMGNYSYCEAVRELMAVPVQLRILALTATPGAKKQTVQAVIDNLQISKLEYRSETDHDVISYVHNRRVELIQVAMGQDAVEINSKFMEVIRPIVAKLTNIGVIQNRDYRTLSPCVLLEIREKFRQGPRQDLSHVNYEDVEGYFGVLITLYYIHKLLSSHGIRPAYEMLERKLKQGYFAKFMSKNEVIVKARQLMQQSLSHGASSPKLSKMLEVLLEHFKTNDPQSSRVIIFSNYRESVRDIMDALGGIGELVKATQFIGQSSGKAMKGQSQKVQQAVLKKFRSGAYNVIVATSIGEEGLDIMEVDLVISFDANISPLRMIQRMGRTGRKHDGRVVVLACEGTELKGYLRKQTKSKTISKHMRNGGINSFDFHPSPRMIPHIIKPEVQYVELSIEKFIPRQKNVKDDQLHISPSKDKLTVAENDLLEAYFHPTGENKCRLSLIAFPHFQTFASRVHKVKHSCQTSMLIDMMQRLQGSVSFQGDSKTSSLQAGLCLEHSKPIAVTKLDKAKKDNEPCTRHTMGTDVISVNCLELDSCHLEIQTKDFVDLTLQDSILCDLGKHQEETCEGDETIPETPLAKRSLSNGDNAYEMVNFEEMETSLLVPDACTNGMRDEQLSPRLTNFIRNGVVPESPIAERGGCLQGKSRNKSVIRDFILPVHLQEEQDVGSLSSRENKKAIIDNGTSKQVCTSPVVNETQSPLLELKNCAVRRRRIFLSPTEEGHTHFTDPSFSEESHAACGEMSVSIKPARKFKRLRKAEDTESNMNLKNNKLFASRANFLKSSSACNPAQHEHGQGKRKSTHNVRDFIEEEAEVSSGACVSNDEDDDDGNSLDSFIDDRTNPTAASQPEACRLDMMAIYRRSLLSQTPCNGRLDFSSNFSPDHVIMEASISESGDSSGKTVTYFQTKPTNQSANRTSESVCIDQITSEALPSTCSPTGTGTEIRSSKRRLAFYHSGRFPNMNLEREFALQSKKEIVDADTTTDILCDDQFYNDLNLDELEAQATSLLKRKLDLSIQKQDTVSHTSNLDTFRSPSFDLGI* 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0721 1255 CDD FANCM_ID 298 412 - -
Apr5g0721 1255 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 424 595 IPR001650 -
Apr5g0721 1255 SMART helicmild6 458 548 IPR001650 -
Apr5g0721 1255 Coils Coil 1212 1232 - -
Apr5g0721 1255 SMART ultradead3 92 287 IPR014001 -
Apr5g0721 1255 Pfam Type III restriction enzyme, res subunit 109 248 IPR006935 GO:0003677|GO:0005524|GO:0016787
Apr5g0721 1255 Pfam Helicase conserved C-terminal domain 431 547 IPR001650 -
Apr5g0721 1255 Gene3D hef helicase domain 295 415 - -
Apr5g0721 1255 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 561 IPR027417 -
Apr5g0721 1255 Gene3D - 416 582 IPR027417 -
Apr5g0721 1255 Gene3D - 92 281 IPR027417 -
Apr5g0721 1255 CDD SF2_C_FANCM_Hef 422 556 - -
Apr5g0721 1255 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 14 1222 - -
Apr5g0721 1255 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 103 266 IPR014001 -
Apr5g0721 1255 MobiDBLite consensus disorder prediction 1029 1063 - -
Apr5g0721 1255 CDD DEXDc_FANCM 94 270 IPR044749 GO:0005524
Apr5g0721 1255 PANTHER FANCONI ANEMIA GROUP M PROTEIN 14 1222 IPR039686 GO:0006281|GO:0043138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0721 Apr-Chr5 9787118 9807555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0721 379 546 Eukaryotic Initiation Factors Gene Family AT3G13920 26.923 9.23e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0721 K10896 - gmx:100820078 1816.97