Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0717 ATGGCCTTTTGGGGAGTGGAAGTAAAACCTGGAAAGCCTTTTACTCATAAATATGATGACTCCAAAGGACGCCTCCATATTTCAATGGCCACTTTGGGTTTGGGGACTGCAACTGCAACAACAAAAAGCACACTGCAGTGCAATGTGGGAAACAAGAGCCCTGTGTATTTATGCTCTCTCTATCCGCGAACCACTGAGTCATTGCAATTAAATTTGGAGCTTGAGGAAGTTGATCAGGTTGTTTTCTCTGTAATTGGCCCTCGGAGCATTCACCTCTGCGGTTACTATCTTGCCACTTCCCGCAATCCCCATGTCATTGATGATTCGGAATCATATGGGGAGGATATTGCAGATACAGAAACTGAGAGATCTGATTACAGTGACGAAGATGAGTATGAGGATAGTTTTATTGATGATGATGGTGTTCCGGAGGTTTACCCATCATCTCCTCTTTCCAACGAAGAGGAAGCTTCTCATGATGACAGACCAAAAGGTAGGAAAGGAAGCCTTCGGCGGCTTAGGAAGAAGTACCACTCGGTAGAGTCAGACGATGATGACTGTCACGAAGAAAAGATAATAGTCAATGACAGTAAGCATGACCAAACCAAAGAAATTGAAAATGAAGATAGCCTACCTATTTCGTCTCTTTATAAGAGTACAGCCACTGGAAAGGCCTTGGACCAGGAAATGGATGATATTGTTGACAGAGGAGCAGGTGATGCCAGCAACAAGAACGGTGAAGATGGTGGAAATAGTATTATCAAATCAAATTTAAAAACTGACAATGTCGTTATAGATATTCAGACGCATAGGGAAGCTGAAAATGTTGGGGATATTAAAAAAATGAGAAAGAAAAAAAAGGGAAAAGAAAAAGAGACTAAGAGTTCCTGTGATGGCCATTCTATCAAACTAGATAACAGTGTAGGAGCTGAGCCAAAAATGGAAAAGGCGACCCAGGATTTTGTGGCAGGAAATGAACAACACCAGCAACATGCTGATCATAAGGAAACTGTTGATCATGGTCTGGATGAAAAGCCAAAGAAGAAAAGGAAAGAGTGGTCAGAGGAGGGAAGGCTTTCGATTGCTAATGGTGTTTATCACGACAATCTTGTTAATTTGCCTCAGAGAATTGAACACAATAAACAGCACACAGTTAATGGCAGGGATGTTAATATTTCGGACAATGTTGCGTTGCCTTCTACCAAAGTGGATCCTGAAAAGAGTAGAACAAAGAGGAAAAAGAAAGAACAGGTAAACAACGGTGACAAAGGATACCATGCAGATATCATCCAAGAGGACAAAGCCAACTCCCATAATCTGATTCATAAATGTTTTGAAGAAAAAGAGCAACATCAGAAGCTAGCTAATGAGAATGGTGTGGACGGCAGTGCTCACAACTCTCCTGATAAAAATCAATTTGAGGATACAAAAGTTAAGAAAAAGAAGAAAAAGAATAAAAGCCAGGGCAGTTTGGAAGTTGTAAACTCTGATATGCCTGTATCTGTTGAGCAGAGTGGCAAGACTGAGATGATGAAGGGGGACAGAAATAAGAGGGCCGATGCAAAGCCTTCCCAGGTTACATCATTGTCAAATGGACTAGTTATTCAAGAGCTAGAGAAGGGGAAAGATGATGGCAAAATTGCTGTGTCAGGGAAAAAGATCAGTGTCTACTACACCGGCAAGTTGAAGGGAAATGAAGTAGTATTTGAGTCAAATGCTGGCCAAGCTCCTTACAAATTTCGCCTTGGTAAAGGACAAGTTATCAAGGGTTGGGATGTTGGCCTTGAAGGCATGCAAGTTGGAGAAAAGAGAAGACTTATAATTCCGCCATCAATGACGTCTACGAGTGATGGACAGAATGCCAAAATACCATCAAATTCGTGGCTGGTTTATGACTTCGAGCTGGTTAAAGTTCATTGA 1920 0.4156 MAFWGVEVKPGKPFTHKYDDSKGRLHISMATLGLGTATATTKSTLQCNVGNKSPVYLCSLYPRTTESLQLNLELEEVDQVVFSVIGPRSIHLCGYYLATSRNPHVIDDSESYGEDIADTETERSDYSDEDEYEDSFIDDDGVPEVYPSSPLSNEEEASHDDRPKGRKGSLRRLRKKYHSVESDDDDCHEEKIIVNDSKHDQTKEIENEDSLPISSLYKSTATGKALDQEMDDIVDRGAGDASNKNGEDGGNSIIKSNLKTDNVVIDIQTHREAENVGDIKKMRKKKKGKEKETKSSCDGHSIKLDNSVGAEPKMEKATQDFVAGNEQHQQHADHKETVDHGLDEKPKKKRKEWSEEGRLSIANGVYHDNLVNLPQRIEHNKQHTVNGRDVNISDNVALPSTKVDPEKSRTKRKKKEQVNNGDKGYHADIIQEDKANSHNLIHKCFEEKEQHQKLANENGVDGSAHNSPDKNQFEDTKVKKKKKKNKSQGSLEVVNSDMPVSVEQSGKTEMMKGDRNKRADAKPSQVTSLSNGLVIQELEKGKDDGKIAVSGKKISVYYTGKLKGNEVVFESNAGQAPYKFRLGKGQVIKGWDVGLEGMQVGEKRRLIIPPSMTSTSDGQNAKIPSNSWLVYDFELVKVH* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0717 639 MobiDBLite consensus disorder prediction 265 281 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 121 140 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 382 398 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 221 355 - -
Apr5g0717 639 SUPERFAMILY FKBP-like 484 638 - -
Apr5g0717 639 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 551 639 IPR001179 GO:0003755
Apr5g0717 639 MobiDBLite consensus disorder prediction 106 188 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 382 428 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 489 503 - -
Apr5g0717 639 Pfam Nucleoplasmin-like domain 3 97 IPR041232 -
Apr5g0717 639 MobiDBLite consensus disorder prediction 327 355 - -
Apr5g0717 639 PANTHER PEPTIDYLPROLYL ISOMERASE 1 256 - -
Apr5g0717 639 PANTHER PEPTIDYLPROLYL ISOMERASE 383 639 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 228 242 - -
Apr5g0717 639 Gene3D Nucleoplasmin core domain 1 101 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 458 525 - -
Apr5g0717 639 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 383 639 - -
Apr5g0717 639 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 256 - -
Apr5g0717 639 MobiDBLite consensus disorder prediction 404 428 - -
Apr5g0717 639 Gene3D - 497 639 IPR046357 GO:0003755
Apr5g0717 639 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 547 636 IPR001179 GO:0003755
Apr5g0717 639 MobiDBLite consensus disorder prediction 245 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0717 Apr-Chr5 9762507 9768903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0717 550 637 Calmodulin-binding Proteins AT3G25230 41.573 1.01e-13 72.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0717 5 9762507 9768903 Apr5g0717 5 9762507 9768903 ECH