Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0695 ATGGCTTTTCTCCTTAGCCTCAGCCACTTCTTCATCTCCTTGTGTTTCCTTTCTTGTCTTTCAATCATAAACGCACTCTCAACCGTTTCCATTTCGGAGACTTCCACCCAAACATTTATTTGTGTCTTGCAACATTCAAACCAACAAGGACAATCAAATCTCAACTGTACTAGCTTCCCTCCGGCTATTGGACTCCAACTGAACCCCAATATTTCCTACTCGGAGATTGTGGGTGGCAACGGGTTTCTATGTGCATTAAGGCCACCATCTTCTTCTGGCTCCATCATGGGCTGTTGGAGATTCTCTGCCAATGCCACCAATGTTCCCTACAAGCGTATCTACCGTGGACCCGTTATTCAAGACATTGATGCTGGCAGTTCTCACGTTTGTGGTCTTGTAAACAGAACTAACGGCCTTGGCCTAGAGTGTTGGCAATGGAATGGCTTCAATTCAAGCACTAGCATGAACATGTCAATGTTAAGCATTGCTGTGGGAGAGAATTTCGTGTGTGGGTTATCACAAACGGGGGATGTTACTTGCATAGGCACTAATAGTAGAGTTGTTGGGCATGGGCCTACGCCTGGTGGAAATTACTCGGTAGTTGCAGCTGGGTTTAGGCATGCTTGTGCCATCTCTCGTTATGGTAGTTTGGATTGTTGGGGAGAGGTAGAGGGCGAGAAGCCACAGGGGAGGTTCGTTTCCTTGGCGTTGGGGGAGAACAGAAGTTGTGCACTTGGCTCTGATAGAAGAGTTGCTTGTTGGGGATCCAATAACTTCAGCATGCCACAGAGTTTGCAAGACACCTTTTTTGAATCAATTGTAGCAAAGCGAAGTGTTTTCTGTGGAGTTGTGTCTTCAAACTATTCCTTGCTTTGTTGGGGTACTGAAATGTTTGAGTCAAATAGGAAGGTGTTTGATAATGTCTTCCCAGGACCTTGTAGGAATGAGTGTCGCTGTGGACCCTTGTCAAACTCTGCCAAACTCTGTGACTCTCCTTCCATCATTTGCCAGCCTTGTCCCCCCGTGTTTGAATCTCCATTGCAGCCACCACAGTCATCATCACCACCACCACCACCACCCCCCCCCCAAAAAGAAGCATCAGAGAGTGGTTGGAGCAACAAAATGGTGGCATTTCTAGTTGTTGGAATCGTGGGTTGCATTATCTTCTTCCTCGTCTTGGCTTTCTTCCTTTACAGGCACTGCAACTGCAAAAACCGAGGAAGCCGCGTGCATGACTCTGGGCCATTGGACGAGCCAGAAGCTGAAGCTGCGGCTCGAGTTCTTCAAAAGCGGTTGAGCCATGTAATCAGCATGGGAAATGGCAGTTCTTTGGAGGAGTTTTCTCTGCAAGTGCTGCTTCAAGCCACCAACAATTTCTCAGAAGAGAACAAAATTGGAATAGGTAGCTTTGGTTCAGTGTATCATGCCACGCTCGAAGATGGGAAGGAGGTTGCTATCAAGAGAGCTGAAGTCTCCTCCACCTCCTATGCAGTTGTGGGCGGCCAACAAGACAAAGACAATGCCTTTGTGAACGAACTTGAGTCTCTTTCAAGACTCCACCACAAGAACCTGGTCATGCTGTTGGGTTTCTATGAGGACACCAAAGAGCGCATTTTGGTGTACGAGTACATGAACAATGGTAGCCTCAGTGATCATCTTCACAAGCTCCAAAGTTCAGCTCTCATGTCATGGCCACTTCGCATAAAGGTAGCTTTAGATGCTGCCAGAGGCATTGAGTATCTACACAACTACGCCACTCCACCAATCATTCACCGTGACATCAAATCTGCCAACATATTATTGGACGCCAGATGGACGGCCAAAGTCTCTGATTTTGGGCTCTCTCTGATGGGCCCTCATCCCGAAGATGATCATTCACACCTTTCACTTCTTGCTGCTGGCACCGTTGGCTACATGGATCCTGAATACTATAGGCTTCAACATTTGACTCCCAAGACTGACGTGTACAGCTTTGGCGTTGTTTTGCTAGAGCTTCTTTCTGGCCACAAAGCCATCCATAAAAACGAAAATGGGGTGCCCAGAAATGTGGTGGACTTTGTGGTACCCCGCATTGTTCAAGATGAAATTCATAGGGTGTTGGATCCAAGAATGCCACCACCCTCACCCTTTGAGATAGAGGCCGTGGCGTTTGTGGGTTATTTGGCAGTAGATTGCGTTAGGCTAGAAGGTAGAGAGAGACCAACTATGTCTCAGGTTGTAAATAACTTGGAAAGAGCATTAGATGCATGCTTGGCCCAACCAACACTGTCAAGGTCCACTACTGCTGCTTCTTTTGACTAG 2301 0.4728 MAFLLSLSHFFISLCFLSCLSIINALSTVSISETSTQTFICVLQHSNQQGQSNLNCTSFPPAIGLQLNPNISYSEIVGGNGFLCALRPPSSSGSIMGCWRFSANATNVPYKRIYRGPVIQDIDAGSSHVCGLVNRTNGLGLECWQWNGFNSSTSMNMSMLSIAVGENFVCGLSQTGDVTCIGTNSRVVGHGPTPGGNYSVVAAGFRHACAISRYGSLDCWGEVEGEKPQGRFVSLALGENRSCALGSDRRVACWGSNNFSMPQSLQDTFFESIVAKRSVFCGVVSSNYSLLCWGTEMFESNRKVFDNVFPGPCRNECRCGPLSNSAKLCDSPSIICQPCPPVFESPLQPPQSSSPPPPPPPPQKEASESGWSNKMVAFLVVGIVGCIIFFLVLAFFLYRHCNCKNRGSRVHDSGPLDEPEAEAAARVLQKRLSHVISMGNGSSLEEFSLQVLLQATNNFSEENKIGIGSFGSVYHATLEDGKEVAIKRAEVSSTSYAVVGGQQDKDNAFVNELESLSRLHHKNLVMLLGFYEDTKERILVYEYMNNGSLSDHLHKLQSSALMSWPLRIKVALDAARGIEYLHNYATPPIIHRDIKSANILLDARWTAKVSDFGLSLMGPHPEDDHSHLSLLAAGTVGYMDPEYYRLQHLTPKTDVYSFGVVLLELLSGHKAIHKNENGVPRNVVDFVVPRIVQDEIHRVLDPRMPPPSPFEIEAVAFVGYLAVDCVRLEGRERPTMSQVVNNLERALDACLAQPTLSRSTTAASFD* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0695 766 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 3 754 IPR044815 GO:0004674
Apr5g0695 766 MobiDBLite consensus disorder prediction 347 365 - -
Apr5g0695 766 CDD STKc_IRAK 465 745 - -
Apr5g0695 766 Pfam Protein kinase domain 460 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0695 766 Gene3D Phosphorylase Kinase; domain 1 420 543 - -
Apr5g0695 766 ProSitePatterns Protein kinases ATP-binding region signature. 465 487 IPR017441 GO:0005524
Apr5g0695 766 SUPERFAMILY Protein kinase-like (PK-like) 434 743 IPR011009 -
Apr5g0695 766 PANTHER OJ000114_01.11 PROTEIN 3 754 - -
Apr5g0695 766 MobiDBLite consensus disorder prediction 347 368 - -
Apr5g0695 766 Gene3D Transferase(Phosphotransferase) domain 1 544 757 - -
Apr5g0695 766 Gene3D - 226 304 IPR009091 -
Apr5g0695 766 Gene3D - 116 225 IPR009091 -
Apr5g0695 766 ProSiteProfiles Protein kinase domain profile. 459 756 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0695 766 SUPERFAMILY RCC1/BLIP-II 110 296 IPR009091 -
Apr5g0695 766 SMART serkin_6 459 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0695 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0695 Apr-Chr5 9486542 9489813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0695 25 761 Receptor kinase-like Gene Family AT5G47850 50.460 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Apr5g0695 Pkinase 5.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0695 - - pvu:PHAVU_011G003100g 1154.04