Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0694 ATGGCCAACATTCCACGTTTCTTTCACTCTTTCCAGTTCTTGGCAGTGCTGTTACTCAATTCCTTCTACTCTATTTTCCCGCCTTGTGTGTCACTAACTTTGGAAACCAAAGCGCTTCTTCAGTTCAAGAGCCATTTGAAGGACTCCTTCAATTCCTTGGATTCATGGAATGAATCAGACTCCCCATGTGGATTTTATGGAATTACATGTGATCCAGTTTCTGGGAGAGTCACAGAAATCTCACTAGAGAATAAGTCCCTCTCTGGTGACATTTTCCCATCACTCCCAGTTCTGCAGAGTCTGCAAGTTCTGTCACTGCCATTCAATTTACTTTCTGGAAAGCTTCCATCAGAAATAACCAGCTGCAGCAACCTCAGAGTGTTGAATTTAACTGGAAATAAGTTGGTTGGAGCAATCCCAGACCTGTCAGGGCTGAGAAACCTGCAGGTTCTAGACCTTTCAGCAAACTACTTTTCTGGAATCATCCCCAGCTGGTTGGGGAATCTTACTGGACTGGTTTCACTGGGTCTTGGGGAGAATGACTACAGTGAGGGTGAGATTCCAGAGACTATTGGAAATCTGAAGAACTTGACCTGGCTCTATCTTGGTGGTTCACATTTGATAGGAGAGATTCCAGAATCAATGTATGAAATGAAGGCATTGGAGACACTGGATATTTCAAGAAACAAGATCTCTGGCAAACTTTCTAGATCAATTTCCAAGTTAGAGAATATTTACAAGATTGAGCTCTTCTCTAATAATTTGACAGGAGAAGTTCCAGCTGAGCTTGCAAACCTCACTAATCTGAGGGAGATTGACATTTCTGCAAATAACATGTATGGTAGTTTGCCAGAGGAAATTGGTAATATGAAGAACTTGGTTGTTTTTCAACTATATGAAAACAGATTTTCTGGAGAACTTCCCGCAGGATTTGGGGATATGCAACATCTCATTGGGTTCTCAGCTTATAGAAACGCCTTCACTGGGATTATTCCAGAAAACTTTGGCCGGTTTTCGCCACTTGAAAGTATTGACATATCTGAGAATCAATTTTCAGGTGATTTCCCAAAGTTCTTGTGTGAAAACAGGAAGTTGAGATTTTTGCTTGCATTGCAAAACAATTTCTCTGGTACTTTTCCGGAGTCTTATGCTGCATGCAAATCTCTGAAGAGATTTAGGATCAGTAATAACCAGTTATCTGGGAAAATTCCAAATGAGGTTTGGGCACTTCCATTTGTACAAATAATTGATTTGGCTTATAATGATTTCACTGGCGTGGTACCTTCAGAAATTGGGTTATCTACTAGCTTAAGTCAGATAGTTTTGATGATGAACAGGTTTTCAGGTAAGCTCCCATCAGAGCTTGGTAAGCTAGTGAACTTGGAGAAGCTTTATTTTAGCAACAATAATTTCTCCGGTGAAATACCACCTGAAATTGGTTATCTGAAGCAGTTATCCTCTTTGCATCTAGAAGAGAATTCATTAACTGGATCAATTCCCACAGAACTGGGTCATTGTGCAAGGCTGGTGGACTTGAATCTTGCTTGGAATTCTCTATCTGGGAATATACCACAATCAGTGTCACTTATGAGTTCATTGAACTCTCTTAACATATCTGGAAACCAACTTACAGGTTCCATTCCAGATAATGTAGAGGCAATAAAGCTAAGCTCGGTGGATTTTTCGAAAAACCTGCTTTCTGGGAGAATTCCATCCAGCCTTTTCATTATTGGTGGAGACAAAGCTTTTGTTGGAAACAAGGGACTTTGTGTTGAGGAAAACCTAAAGCCTTCCATGAATTCAGATTTGAAGATTTGTGCCAATAATCACGGTCAGACAAGGGTCTTTGCTGATAAATTTGTCTTGCTCTTCTTCACTGCTTCTATTTTTGTTGTTATTTTAGTTGGGTTGCTGCTTTTGAGGTGTAGAAGCATCAAGCAGAGTGCCGGAAAAAACATGGAATGTCAGAAGGAAGCAACTCAAAAATGGAAACTTGCGTCTTTCCACCAAGTAGATATTGATGCCGATGAAATATGTAATCTGGATGAGGATAATTTAATAGGAAGTGGTGGTACGGGAAAGGTTTATCGAGTGGAGCTAAGAAAAAATGGAGCCATGGTGGCTGTCAAGCAACTAGGGAAAGTAGATGGTGTAAAGATTTTAGCTGCAGAGATGGAGATTTTGGGGAAAATTAGGCACAGAAATATACTTAAACTTTATGCTTGTCTACTTAAAGGAGGATCCAACCTGTTAGTGTTTGAGTACATGCCAAATGGTAATCTTTTTCAAGCTCTTCACAGACAAGTAAAGGATGGGAAGCCAAACTTGGATTGGAACCAGAGGTATAAAATTGCTCTGGGAGCTGCAAAAGGAATTGCCTATTTACACCATGACTATAATCCACCAATTATTCACAGAGATATAAAATCCAGCAATATTTTGCTTGATGAGGATTATGAGCCAAAAATTGCGGATTTTGGTATTGCAAGGTTTGCAGAAAAGTCTAATGACCAGTTGGGTTATAGCTGTCTAGTTGGCACACTTGGTTATATTGCTCCAGAACTTGCTTATGCCACTGACATCACTGAAAAGAGTGATGTTTATAGCTTTGGAGTGGTGCTATTAGAATTAGTGTCCGGCAGAGAACCCATTGAAGATGATTATGGAGAAGCAAAGGATATTGTTTACTGGGTTTTGACTCATCTCAATGACCGTGAAAGTGTTCTCACTATTCTTGATGATAGAGTGGCACCTGAATCTGTTGAATATATGATAAAAGTGTTGAAGATTGCTATTAAGTGTATCACTAAGCTTCCATCTTTGCGCCCCACTATGAGAGAGGTTGTCAAGATGCTCATTGATGCTGAACCTTGCACATTGAAATTTCCTGACAGCCGTCTTGAAGATGCGAAAGCTTTTCTCTAG 2925 0.4 MANIPRFFHSFQFLAVLLLNSFYSIFPPCVSLTLETKALLQFKSHLKDSFNSLDSWNESDSPCGFYGITCDPVSGRVTEISLENKSLSGDIFPSLPVLQSLQVLSLPFNLLSGKLPSEITSCSNLRVLNLTGNKLVGAIPDLSGLRNLQVLDLSANYFSGIIPSWLGNLTGLVSLGLGENDYSEGEIPETIGNLKNLTWLYLGGSHLIGEIPESMYEMKALETLDISRNKISGKLSRSISKLENIYKIELFSNNLTGEVPAELANLTNLREIDISANNMYGSLPEEIGNMKNLVVFQLYENRFSGELPAGFGDMQHLIGFSAYRNAFTGIIPENFGRFSPLESIDISENQFSGDFPKFLCENRKLRFLLALQNNFSGTFPESYAACKSLKRFRISNNQLSGKIPNEVWALPFVQIIDLAYNDFTGVVPSEIGLSTSLSQIVLMMNRFSGKLPSELGKLVNLEKLYFSNNNFSGEIPPEIGYLKQLSSLHLEENSLTGSIPTELGHCARLVDLNLAWNSLSGNIPQSVSLMSSLNSLNISGNQLTGSIPDNVEAIKLSSVDFSKNLLSGRIPSSLFIIGGDKAFVGNKGLCVEENLKPSMNSDLKICANNHGQTRVFADKFVLLFFTASIFVVILVGLLLLRCRSIKQSAGKNMECQKEATQKWKLASFHQVDIDADEICNLDEDNLIGSGGTGKVYRVELRKNGAMVAVKQLGKVDGVKILAAEMEILGKIRHRNILKLYACLLKGGSNLLVFEYMPNGNLFQALHRQVKDGKPNLDWNQRYKIALGAAKGIAYLHHDYNPPIIHRDIKSSNILLDEDYEPKIADFGIARFAEKSNDQLGYSCLVGTLGYIAPELAYATDITEKSDVYSFGVVLLELVSGREPIEDDYGEAKDIVYWVLTHLNDRESVLTILDDRVAPESVEYMIKVLKIAIKCITKLPSLRPTMREVVKMLIDAEPCTLKFPDSRLEDAKAFL* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0694 974 Gene3D Phosphorylase Kinase; domain 1 643 755 - -
Apr5g0694 974 Gene3D Transferase(Phosphotransferase) domain 1 756 961 - -
Apr5g0694 974 Gene3D Ribonuclease Inhibitor 183 242 IPR032675 -
Apr5g0694 974 Gene3D Ribonuclease Inhibitor 243 315 IPR032675 -
Apr5g0694 974 PANTHER RECEPTOR PROTEIN-TYROSINE KINASE CEPR2 15 965 - -
Apr5g0694 974 ProSitePatterns Protein kinases ATP-binding region signature. 687 710 IPR017441 GO:0005524
Apr5g0694 974 ProSiteProfiles Protein kinase domain profile. 681 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0694 974 CDD STKc_IRAK 687 952 - -
Apr5g0694 974 Pfam Leucine Rich Repeat 221 242 IPR001611 GO:0005515
Apr5g0694 974 SMART serkin_6 681 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0694 974 SUPERFAMILY Protein kinase-like (PK-like) 678 952 IPR011009 -
Apr5g0694 974 Pfam Protein kinase domain 683 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr5g0694 974 Gene3D Ribonuclease Inhibitor 31 182 IPR032675 -
Apr5g0694 974 SUPERFAMILY RNI-like 278 575 - -
Apr5g0694 974 SMART LRR_typ_2 458 480 IPR003591 -
Apr5g0694 974 SMART LRR_typ_2 482 506 IPR003591 -
Apr5g0694 974 SMART LRR_typ_2 530 554 IPR003591 -
Apr5g0694 974 SMART LRR_typ_2 145 168 IPR003591 -
Apr5g0694 974 SMART LRR_typ_2 218 242 IPR003591 -
Apr5g0694 974 SMART LRR_typ_2 98 122 IPR003591 -
Apr5g0694 974 SMART LRR_typ_2 266 290 IPR003591 -
Apr5g0694 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Apr5g0694 974 ProSiteProfiles Leucine-rich repeat profile. 124 146 IPR001611 GO:0005515
Apr5g0694 974 Pfam Leucine rich repeat N-terminal domain 35 71 IPR013210 -
Apr5g0694 974 Gene3D Ribonuclease Inhibitor 316 600 IPR032675 -
Apr5g0694 974 Pfam Leucine rich repeat 146 207 IPR001611 GO:0005515
Apr5g0694 974 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 15 965 - -
Apr5g0694 974 SUPERFAMILY L domain-like 57 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0694 Apr-Chr5 9480979 9486269 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0694 25 965 Receptor kinase-like Gene Family AT1G72180 57.353 0.0 1050
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr5g0694 Pkinase 5.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0694 - - gmx:100789704 1635.93