LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g0692	ATGTATAACTCATTCAATGCCAGTACGTGTGAGATAGTGGAAGCTAGGGAAGAGATCATTTCTGAGTTCAAAATAGATGAAAGGCCTGAGAGTAGTTGTGCTCACAAATCAGGAAAAAAGTGTAGTATAGAGGATGATATCAATAATCTTTTCCAGGCAATTTATATTAAAAATTCAAGTAGAGGTCTTAATACACCATATTCACACAAGAGAGCTCCTAAAAAGCTCATAAAAGTCAATCCATCACAGCCATCAGGAATTGGCTTCTCAGAACCTGTAAGTTTGAAGCAAGCATTTAGAGGGTTGTGCATCTCACAGGCATCAGAAATGGCTGCATTGAAGAGACTATCAAAGCCGTCCAATTCATCAAGGATATCAGAGGCTCGAACCATAAAAAAGTTGTATATAGCAGAAGTAGATGAACGGCAAGGGGAATCGGTGGAATGCTCTCTTGTGCCAGTGATATCAAGTTCAACTTCAAGTGCTCATCAGTCTACTCCCTTTGTTGATGCAACAAACCCAAAAACATTGCCAGCTAAGTTAGCATCCCGAAATCAAGTTGTCCCTCTTCCATCAGAGATTCAGGGTGAGAAGCTAGTCACGAGGCTTGAAAATGAGCTACAAGCAAATTCATCATCAGTTGCCTACCCTAGTAATGAAGTGCCTGAGGTGGAGATTAGACTCAAAACGCTTCCTTCTTCCTCCACCAATGATTCTCTTAGTTCTTCAGTGCCAGATAAGGGGATGGAAGCGAAGCTAATTTCTCCACCTAGTTCTGGCACGGTTAATGGAGTGGATAAGCCCACAAGTAGTAATGCTGATGCATCTTTGACAAAGCCAATATTTAAGGACAAGAACTTTATTACCAAGAAAGTGAAGCAAGATTTACGTCCAAGCTGCTCTACTTCATGTACCAGAAAAGATGGCAATGAATTGGCTTCTAGTACCGGTAAATGGAACAAGGTGACTGAAAATTCTGAATTAAAGGATGAAATGAAAGAAAACGAGAAACTGTCCTGCAGCCATTCAAACCATAACATTGAAGTTGACTCAGTTAATACAGGCATGGATTCAAGTAAACCTGGTTTCTGTTTGACTGGCAATAAGAGAAATAAGTTTGTAGTGACAAAGTTTGATGAGAAATCAAGATCAAGGGAAAAGGGTGAATTTTCCCAAATTTCAGAAAGTGGCATTGGTGACTATGGTAGTAGTACAAGCATCAGTGGGGAGAGCAATCTAATTGGTTCTAGATGCAGTGGCCACAGGCCTCACATGTCAAAACACATGAGATGGGAAGCAGTTCATGTTGTTCAGCAGCAGTATGGTAATTTAAGTTTGAGGCACTTCAAGCTTCTCAGAAAGCTTGGTTGTGGGGACATTGGAACTGTTTATCTTGCCGAACTAATTGGCACAAATTGCCTTTTTGCTATAAAAGTGGTGGAGAAGGAAATTTTGGTAACCCGGAAGAAAATGTTCAGGTCCCAAATTGAAAGAGAGATCCTGCAGATGCTAGATCATCCGTTTCTTCCTACACTTTATGCCCATATTGCAACAGATAATCTCTCTTGCTTGGTTATGGAGTATTGTCCAGGTGGAGATCTTCATGTGCTGCGCCAGAGGCAACCGTATCAGAGCTTCTCAGAGCAAGCAACCAGGTTTTATGTAGCTGAAGTTCTCCTTGCCCTGGAGTATTTGCACATGCTAGGAGTTGTGTATCGAGACCTGAAGCCTGAAAATATCCTGGTTAGAGAAGATGGGCACATTATGCTTACGGATTTTGACCTGTCACTAAGATGTTCTGTCAATCCTATGTTAGTGAAGTCATATTCACCAGATGCGGATCCAACAAAGAACATGTTCAGTTCCTGTTCTGAGGCTAGCTGCATGCACCCTTTCTGTCTTCAACCAAATTGGCAAGTTTCCTGCTTTACTCCTATTCTATTATCAGCTGGAGCTAAATCTCGAAATATTAAGGCTGATATAGCTGCTCAGGTTGGTCCACTGCCACAGCTTGTAGTGGAGCCTACCAGTGCTCGTTCAAACTCATTTGTTGGAACCTATGAATACCTTGCTCCAGAAATCATAAAAGGCCAGGGTCATGGGAGTTCTGTAGATTGGTGGACTTTAGGTGTATTTTTGTTTGAGCTTTTATATGGTAAGACTCCCTTCAAGGGCCCTACAAATGAAGATACATTAGCCAATGTTGTTTCTCAGAGCCTTAAGTTTCCAATTACTCCTATAATCAGCTTTCGAGCAAGAGATTTGATCAGAAGATTGTTGATAAAAGATCCTGAAGGTCGATTAGGCTCTGTAAAAGGAGCTGCTGAAATAAAGCAGCATTCCTTCTTTGAAGGCCTCAACTGGGCTCTTATACGGTGTGCAGCACCACCCCAACTCCCCAAATTTCGTGTTCAATCCATGGCTTCACACAAGGAGAATGCCAATGATTTAAAAGATACAGAAGGTTGTGAAGAGTTTGACCTGTTTTAG	2490	0.4153	MYNSFNASTCEIVEAREEIISEFKIDERPESSCAHKSGKKCSIEDDINNLFQAIYIKNSSRGLNTPYSHKRAPKKLIKVNPSQPSGIGFSEPVSLKQAFRGLCISQASEMAALKRLSKPSNSSRISEARTIKKLYIAEVDERQGESVECSLVPVISSSTSSAHQSTPFVDATNPKTLPAKLASRNQVVPLPSEIQGEKLVTRLENELQANSSSVAYPSNEVPEVEIRLKTLPSSSTNDSLSSSVPDKGMEAKLISPPSSGTVNGVDKPTSSNADASLTKPIFKDKNFITKKVKQDLRPSCSTSCTRKDGNELASSTGKWNKVTENSELKDEMKENEKLSCSHSNHNIEVDSVNTGMDSSKPGFCLTGNKRNKFVVTKFDEKSRSREKGEFSQISESGIGDYGSSTSISGESNLIGSRCSGHRPHMSKHMRWEAVHVVQQQYGNLSLRHFKLLRKLGCGDIGTVYLAELIGTNCLFAIKVVEKEILVTRKKMFRSQIEREILQMLDHPFLPTLYAHIATDNLSCLVMEYCPGGDLHVLRQRQPYQSFSEQATRFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCSVNPMLVKSYSPDADPTKNMFSSCSEASCMHPFCLQPNWQVSCFTPILLSAGAKSRNIKADIAAQVGPLPQLVVEPTSARSNSFVGTYEYLAPEIIKGQGHGSSVDWWTLGVFLFELLYGKTPFKGPTNEDTLANVVSQSLKFPITPIISFRARDLIRRLLIKDPEGRLGSVKGAAEIKQHSFFEGLNWALIRCAAPPQLPKFRVQSMASHKENANDLKDTEGCEEFDLF*	830

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g0692	829	MobiDBLite	consensus disorder prediction	298	317	-	-
	Apr5g0692	829	SUPERFAMILY	Protein kinase-like (PK-like)	425	807	IPR011009	-
	Apr5g0692	829	CDD	STKc_phototropin_like	447	801	-	-
	Apr5g0692	829	SMART	serkin_6	449	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr5g0692	829	MobiDBLite	consensus disorder prediction	256	273	-	-
	Apr5g0692	829	MobiDBLite	consensus disorder prediction	229	244	-	-
	Apr5g0692	829	PANTHER	SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1	6	826	-	-
	Apr5g0692	829	Gene3D	Transferase(Phosphotransferase) domain 1	677	801	-	-
	Apr5g0692	829	ProSiteProfiles	Protein kinase domain profile.	449	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr5g0692	829	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	570	582	IPR008271	GO:0004672\|GO:0006468
	Apr5g0692	829	Gene3D	Phosphorylase Kinase; domain 1	447	528	-	-
	Apr5g0692	829	MobiDBLite	consensus disorder prediction	229	273	-	-
	Apr5g0692	829	Pfam	Protein kinase domain	450	599	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr5g0692	829	Pfam	Protein kinase domain	680	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Apr5g0692	829	Gene3D	Transferase(Phosphotransferase) domain 1	529	597	-	-
	Apr5g0692	829	PANTHER	FLIPPASE KINASE 1-RELATED	6	826	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g0692	Apr-Chr5	9463219	9467458	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr5g0692	7	802	AGC Kinase Gene Family	AT3G52890	46.171	0.0	680

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Apr5g0692		Pkinase	1.8e-35	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g0692	-		-	ccaj:109798461	1147.88