Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0688 ATGGTTATGATGGCAATACGACAGGGGGAGTTCCGAATGGAGATGCGGATAAATTCCCAAACCACACTCTATCCCTACATAAATGATAAACCCTCCATCCAACTCAACTCGTCTAGTGGGAGTTTGGAAGAATCACGGCCACAGCTCATATTCATGTGCATCACTGAGGAACCTGAACCCACATCCTCCAAACGGGGCTCAAGGAAGCGAGCGCGGGACTCCAACTCGGCATTCCGCGGTGTGCGCAGACGCAGTTGGGGACGCTACGTTTCGGAGATAAGGTTGCCGGGTCAGAAAACCCGGATATGGCTCGGCTCATTCGGCTCGGCTGAGATGGCGGCTCGAGCATACGACTCTGCGGCTTTCTTCTTGAAAGGAACCTCTGCCACCCTCAATTTCCCCGACCTCGTTGACTCGCTGCCTCGCCCTCTCTCCTCGTCCAGGAGAGACATACAATCGGCAGCGGCTAAAGCGGCTCTCGAGCCTCCGCCACGCTCTTCTGCCAAAAGTGACTCGTTGGAGATGGAGTGGTGGGAGCATTTGGAAGAACACTCTACTTCGACGACGTCGTTTCAGGATGTGAAGGAAGCTCCTCTCATGAGCCCTCTCAGGGTGGACTACACTTTTGGAGAATTCTCATGGAATGAAGTATTCAATCTCAATGACGACATGTTCATGATGGCATCAACATCAACTCTTGTTTAG 705 0.5262 MVMMAIRQGEFRMEMRINSQTTLYPYINDKPSIQLNSSSGSLEESRPQLIFMCITEEPEPTSSKRGSRKRARDSNSAFRGVRRRSWGRYVSEIRLPGQKTRIWLGSFGSAEMAARAYDSAAFFLKGTSATLNFPDLVDSLPRPLSSSRRDIQSAAAKAALEPPPRSSAKSDSLEMEWWEHLEEHSTSTTSFQDVKEAPLMSPLRVDYTFGEFSWNEVFNLNDDMFMMASTSTLV* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0688 234 MobiDBLite consensus disorder prediction 56 77 - -
Apr5g0688 234 MobiDBLite consensus disorder prediction 151 171 - -
Apr5g0688 234 SMART rav1_2 77 140 IPR001471 GO:0003700|GO:0006355
Apr5g0688 234 Gene3D AP2/ERF domain 77 135 IPR036955 GO:0003700|GO:0006355
Apr5g0688 234 ProSiteProfiles AP2/ERF domain profile. 77 134 IPR001471 GO:0003700|GO:0006355
Apr5g0688 234 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Apr5g0688 234 PRINTS Ethylene responsive element binding protein signature 78 89 IPR001471 GO:0003700|GO:0006355
Apr5g0688 234 PRINTS Ethylene responsive element binding protein signature 100 116 IPR001471 GO:0003700|GO:0006355
Apr5g0688 234 CDD AP2 76 136 IPR001471 GO:0003700|GO:0006355
Apr5g0688 234 MobiDBLite consensus disorder prediction 61 77 - -
Apr5g0688 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 66 198 - -
Apr5g0688 234 Pfam AP2 domain 77 126 IPR001471 GO:0003700|GO:0006355
Apr5g0688 234 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF036-LIKE 66 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0688 Apr-Chr5 9370026 9370849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0688 69 162 AP2-EREBP Transcription Factor Family AT5G11590 62.887 3.73e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr5g0688 AP2 2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0688 K09286 - gmx:100783790 222.246