Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0686 ATGGGTTCGTCTAATGGTGGTGTGCCCCCGGGATTTAGATTTCATCCCACAGATGAAGAGCTGCTTCTTTACTACTTGAAGAAAAAGGTTTCCTTTCAGAAGTTTGACATGGATGTTATAAGAGAGGTGGACTTGAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGTAGAATTGGCTCAACTCCACAAAACGAGTGGTATTTCTTCAGTCACAAAGACAGAAAATACCCTACAGGATCAAGGACTAACAGAGCAACAAATGCAGGGTTTTGGAAAGCAACAGGAAGAGATAAATGCATTAGGAATAGCTACAAGAAGATTGGAATGAGAAAAACCCTTGTGTTTTACAAAGGTAGAGCTCCTCATGGACAAAAGACTGATTGGATCATGCATGAGTACCGTTTGGAAGATGGCAACGATCCTCAAGGAAATACTAATGAAGATGGCTGGGTGGTGTGTAGAGTGTTCAAGAAGAAAAACCTGTTTAAGATTGGAAATGAAGGTGTCTCTACACATAATGCAGACCAACAAATCAATAATTCCTCAACCTGCAATACACGCCCCTTCATACACAGAGAAAATCATTACTTATTACATCAACAACAAAACTCGAAGAACCCATCAGGATTTGAACTTGATAAGCCTGAGCTTGCTCTACACTACCCACATTTGCAAAACCCTCAATACTCACTCTTTCAGGCACAGCCTCTTCTTCAGAAACCTATGGTTTATGACTACTCATATGCATCATCTCTACCGTCCGACACCCCTATCACCGCAAAGCAACTCATGACAAACCCAAGAGATTGTGAGAGTGGCAGTGATGGTTTAAGATATCAAGTTTCAGAATCTGGCATGGAAGCTGCCTCATGCGAGCCAAATCAAGAAATGGGTGTTGGAAGAGGTGAAGGAATAAATGAATGGGGTGTTCTTGATAGGCTCGTGACCTCCCATCTTGGAAATGAAGATTCAACCAAAGGAGTTCGGTTTGAAGAAGCAAATCCACAGTCTGTTCACCAAATCAACCAACTTTCATTGAGAGGAGAAATGAACTTTTGGGCTTATGGAAAACAATGA 1080 0.4167 MGSSNGGVPPGFRFHPTDEELLLYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPQGNTNEDGWVVCRVFKKKNLFKIGNEGVSTHNADQQINNSSTCNTRPFIHRENHYLLHQQQNSKNPSGFELDKPELALHYPHLQNPQYSLFQAQPLLQKPMVYDYSYASSLPSDTPITAKQLMTNPRDCESGSDGLRYQVSESGMEAASCEPNQEMGVGRGEGINEWGVLDRLVTSHLGNEDSTKGVRFEEANPQSVHQINQLSLRGEMNFWAYGKQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0686 359 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Apr5g0686 359 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Apr5g0686 359 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Apr5g0686 359 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 292 - -
Apr5g0686 359 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Apr5g0686 359 PANTHER PROTEIN BEARSKIN2-LIKE 5 292 IPR033519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0686 Apr-Chr5 9354939 9358928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0686 1 353 NAC Transcription Factor Family AT1G33280 55.028 1.20e-122 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr5g0686 NAM 4.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0686 - - gmx:100804181 670.233