Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g0666 ATGGCATTGCAAAACCAAGTTGGAAGTTCAATGTCTTCCCATAATCTCTTAAGAATACTTCTAACCCTTCTGTTCATCTCAACCCTTATCCATGCAGCATCCACATCCAGCTCCTCAACCACCACCAATTCCCTCAAAGCCTACAAAATGTTCATAAAAGATGAGTGCAATTCAACCACTTACCCTGATGTTTGCTACAAGTCTCTCTCCCCTTACGCATCAAAAGTAAAAAATAACCCTTTAACACTCACCAAACTGTCCGTTAATGTGGCTCTAAAAGCAGCCAAAAGTGCATATAGCACATTGAAAAAGCTATCCAATTCCACAGGGAAGCTAACACGTGGTGAAACGTCGGTCATTGCAGATTGCAGAGAGAATATCGATGAAACGTTGGATCTACTTAAGCAATCTGTTGATGGCTTGGCTCATTTGAATGGTACCACTACTAGTGATGAGAAATTTCAATGGGATACCATTAAGACATGGATGAGTGCTGCCATAACGGATGAGTCTACATGCACCGATGAGTTTGATGAAATGAAAGTGCGTCCTTCACTTCAGAAGAAGATCAAACCTAGTGTTGCTAATGTTGCTTGGATGAATAGCAATGCCTTGGCTTTTGTCAACAGGCTTTACTACTAA 642 0.4112 MALQNQVGSSMSSHNLLRILLTLLFISTLIHAASTSSSSTTTNSLKAYKMFIKDECNSTTYPDVCYKSLSPYASKVKNNPLTLTKLSVNVALKAAKSAYSTLKKLSNSTGKLTRGETSVIADCRENIDETLDLLKQSVDGLAHLNGTTTSDEKFQWDTIKTWMSAAITDESTCTDEFDEMKVRPSLQKKIKPSVANVAWMNSNALAFVNRLYY* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g0666 213 SMART PMEI_2 47 207 IPR006501 GO:0004857
Apr5g0666 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 212 - -
Apr5g0666 213 Pfam Plant invertase/pectin methylesterase inhibitor 51 206 IPR006501 GO:0004857
Apr5g0666 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 25 211 IPR006501 GO:0004857
Apr5g0666 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 212 IPR035513 -
Apr5g0666 213 CDD PMEI-like_3 56 211 - -
Apr5g0666 213 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 10 212 - -
Apr5g0666 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 211 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g0666 Apr-Chr5 9181114 9181755 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g0666 38 211 Carbohydrate Esterase AT1G53830 32.787 3.49e-18 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g0666 - - gmx:100776299 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g0666 5 9181114 9181755 Apr5g0666 5 9181114 9181755 ECH